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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102578389   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 sly-u.5   101249237   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 nta-r.1   107764096   pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like 
 nta-r.1   107814339   pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like 
 ath-u.5   OTP84   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   102670454   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 bra-r.6   103841648   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 vvi-u.5   100259539   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 ppo-u.5   7477787   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 mtr-u.5   11439625   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 ghi-r.1   107927561   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 ghi-r.1   107945281   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 bna-r.1   106415730   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 bna-r.1   106451570   pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like 
 cit-r.1   102609813   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 osa-u.5   4334962   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 zma-u.5   103629856   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 tae-r.2   123186937   pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like 
 tae-r.2   123050968   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 hvu-r.1   123431390   pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like 
 sbi-r.1   8058856   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 bdi-r.1   100821270   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 

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Top 50 coexpressed genes to 102578389 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102578389 (sot-r.1 coexpression data)

CoexMap"102578389"


sotLOC102578389 | Entrez gene ID : 102578389      
Species sot sly nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 1 1 2 1 1 1 1 1 1 2 2 1 1 1 2 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (768 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006363206.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  cyto 1,  mito 1  (predict for XP_006363206.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_006363206.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102578389
sly-u.5
for
101249237
nta-r.1
for
107764096
nta-r.1
for
107814339
ath-u.5
for
OTP84
gma-u.5
for
102670454
bra-r.6
for
103841648
vvi-u.5
for
100259539
ppo-u.5
for
7477787
mtr-u.5
for
11439625
ghi-r.1
for
107927561
ghi-r.1
for
107945281
bna-r.1
for
106415730
bna-r.1
for
106451570
cit-r.1
for
102609813
osa-u.5
for
4334962
zma-u.5
for
103629856
tae-r.2
for
123186937
tae-r.2
for
123050968
hvu-r.1
for
123431390
sbi-r.1
for
8058856
bdi-r.1
for
100821270


Ortholog ID: 11697
Species sot sly nta nta ath gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae hvu sbi bdi
Symbol LOC102578389 LOC101249237 LOC107764096 LOC107814339 OTP84 LOC102670454 LOC103841648 LOC100259539 LOC7477787 LOC11439625 LOC107927561 LOC107945281 LOC106415730 LOC106451570 LOC102609813 LOC4334962 LOC103629856 LOC123186937 LOC123050968 LOC123431390 LOC8058856 LOC100821270
Function* pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g57430, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00480 Glutathione metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102578389 101249237 107764096 107814339 824910 102670454 103841648 100259539 7477787 11439625 107927561 107945281 106415730 106451570 102609813 4334962 103629856 123186937 123050968 123431390 8058856 100821270
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