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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103834937   ATP-dependent DNA helicase Q-like 3 
 bna-r.1   106361284   ATP-dependent DNA helicase Q-like 3 
 bna-r.1   106436624   ATP-dependent DNA helicase Q-like 3 
 ath-u.5   RecQl3   DEAD/DEAH box RNA helicase family protein 
 ghi-r.1   107895547   ATP-dependent DNA helicase Q-like 3 
 ghi-r.1   107912858   ATP-dependent DNA helicase Q-like 3 
 cit-r.1   102620027   ATP-dependent DNA helicase Q-like 3 
 gma-u.5   100819601   ATP-dependent DNA helicase Q-like 3 
 vvi-u.5   100242171   ATP-dependent DNA helicase Q-like 3 
 ppo-u.5   18099126   ATP-dependent DNA helicase Q-like 3 
 mtr-u.5   11446659   ATP-dependent DNA helicase Q-like 3 
 sly-u.5   101250424   ATP-dependent DNA helicase Q-like 3 
 sot-r.1   102581697   ATP-dependent DNA helicase Q-like 3 
 nta-r.1   107778829   ATP-dependent DNA helicase Q-like 3 
 nta-r.1   107759901   ATP-dependent DNA helicase Q-like 3 
 osa-u.5   4330923   ATP-dependent DNA helicase Q-like 3 
 zma-u.5   100280239   ATP-dependent DNA helicase Q-like 
 tae-r.2   123138522   ATP-dependent DNA helicase Q-like 3 
 tae-r.2   123145766   ATP-dependent DNA helicase Q-like 3 
 tae-r.2   123128632   ATP-dependent DNA helicase Q-like 3 
 hvu-r.1   123406204   ATP-dependent DNA helicase Q-like 3 
 sbi-r.1   8082689   ATP-dependent DNA helicase Q-like 3 
 bdi-r.1   100837791   ATP-dependent DNA helicase Q-like 3 
 cre-r.1   CHLRE_16g673393v5   uncharacterized protein 

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Top 50 coexpressed genes to 103834937 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103834937 (bra-r.6 coexpression data)

CoexMap"103834937"


braLOC103834937 | Entrez gene ID : 103834937    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 2 1 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp03440 [list] [network] Homologous recombination (64 genes)
brp03460 [list] [network] Fanconi anemia pathway (49 genes)
GO BP
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (143 genes)  IEA  
GO CC
GO:0005694 [list] [network] chromosome  (494 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (7940 genes)  IEA  
GO MF
GO:0009378 [list] [network] four-way junction helicase activity  (9 genes)  IEA  
GO:0043138 [list] [network] 3'-5' DNA helicase activity  (16 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2916 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (5846 genes)  IEA  
Protein XP_009109277.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 2,  cyto_nucl 2,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_009109277.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for XP_009109277.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103834937
bna-r.1
for
106361284
bna-r.1
for
106436624
ath-u.5
for
RecQl3
ghi-r.1
for
107895547
ghi-r.1
for
107912858
cit-r.1
for
102620027
gma-u.5
for
100819601
vvi-u.5
for
100242171
ppo-u.5
for
18099126
mtr-u.5
for
11446659
sly-u.5
for
101250424
sot-r.1
for
102581697
nta-r.1
for
107778829
nta-r.1
for
107759901
osa-u.5
for
4330923
zma-u.5
for
100280239
tae-r.2
for
123138522
tae-r.2
for
123145766
tae-r.2
for
123128632
hvu-r.1
for
123406204
sbi-r.1
for
8082689
bdi-r.1
for
100837791
cre-r.1
for
CHLRE_16g673393v5


Ortholog ID: 10898
Species bra bna bna ath ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC103834937 LOC106361284 LOC106436624 RecQl3 LOC107895547 LOC107912858 LOC102620027 LOC100819601 LOC100242171 LOC18099126 LOC11446659 LOC101250424 LOC102581697 LOC107778829 LOC107759901 LOC4330923 LOC100280239 LOC123138522 LOC123145766 LOC123128632 LOC123406204 LOC8082689 LOC100837791 CHLRE_16g673393v5
Function* ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 DEAD/DEAH box RNA helicase family protein ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 4
ghi03460 Fanconi anemia pathway 2
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 6
ghi03440 Homologous recombination 4
ghi03460 Fanconi anemia pathway 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 2
gma00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03440 Homologous recombination 3
mtr03460 Fanconi anemia pathway 2
mtr04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 5
nta04130 SNARE interactions in vesicular transport 2
nta03060 Protein export 2
nta04145 Phagosome 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03440 Homologous recombination 2
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03440 Homologous recombination 2
tae03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103834937 106361284 106436624 829727 107895547 107912858 102620027 100819601 100242171 18099126 11446659 101250424 102581697 107778829 107759901 4330923 100280239 123138522 123145766 123128632 123406204 8082689 100837791 5721377
The preparation time of this page was 1.8 [sec].