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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123138522   ATP-dependent DNA helicase Q-like 3 
 tae-r.2   123128632   ATP-dependent DNA helicase Q-like 3 
 tae-r.2   123145766   ATP-dependent DNA helicase Q-like 3 
 hvu-r.1   123406204   ATP-dependent DNA helicase Q-like 3 
 bdi-r.1   100837791   ATP-dependent DNA helicase Q-like 3 
 osa-u.5   4330923   ATP-dependent DNA helicase Q-like 3 
 zma-u.5   100280239   ATP-dependent DNA helicase Q-like 
 sbi-r.1   8082689   ATP-dependent DNA helicase Q-like 3 
 ath-u.5   RecQl3   DEAD/DEAH box RNA helicase family protein 
 gma-u.5   100819601   ATP-dependent DNA helicase Q-like 3 
 sly-u.5   101250424   ATP-dependent DNA helicase Q-like 3 
 bra-r.6   103834937   ATP-dependent DNA helicase Q-like 3 
 vvi-u.5   100242171   ATP-dependent DNA helicase Q-like 3 
 ppo-u.5   18099126   ATP-dependent DNA helicase Q-like 3 
 mtr-u.5   11446659   ATP-dependent DNA helicase Q-like 3 
 ghi-r.1   107912858   ATP-dependent DNA helicase Q-like 3 
 ghi-r.1   107895547   ATP-dependent DNA helicase Q-like 3 
 bna-r.1   106361284   ATP-dependent DNA helicase Q-like 3 
 bna-r.1   106436624   ATP-dependent DNA helicase Q-like 3 
 sot-r.1   102581697   ATP-dependent DNA helicase Q-like 3 
 cit-r.1   102620027   ATP-dependent DNA helicase Q-like 3 
 nta-r.1   107759901   ATP-dependent DNA helicase Q-like 3 
 nta-r.1   107778829   ATP-dependent DNA helicase Q-like 3 
 cre-r.1   CHLRE_16g673393v5   uncharacterized protein 

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Top 50 coexpressed genes to 123138522 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123138522 (tae-r.2 coexpression data)

CoexMap"123138522"


taeLOC123138522 | Entrez gene ID : 123138522    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 1 1 1 1 1 1 1 1 1 1 2 2 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03440 [list] [network] Homologous recombination (198 genes)
taes03460 [list] [network] Fanconi anemia pathway (141 genes)
GO BP
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (222 genes)  IEA  
GO CC
GO:0005694 [list] [network] chromosome  (1392 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (13575 genes)  IEA  
GO MF
GO:0009378 [list] [network] four-way junction helicase activity  (23 genes)  IEA  
GO:0043138 [list] [network] 3'-5' DNA helicase activity  (43 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (7858 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (11810 genes)  IEA  
Protein XP_044414433.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 1,  cysk 1,  golg 1,  golg_plas 1  (predict for XP_044414433.1)
Subcellular
localization
TargetP
other 7,  mito 6  (predict for XP_044414433.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123138522
tae-r.2
for
123128632
tae-r.2
for
123145766
hvu-r.1
for
123406204
bdi-r.1
for
100837791
osa-u.5
for
4330923
zma-u.5
for
100280239
sbi-r.1
for
8082689
ath-u.5
for
RecQl3
gma-u.5
for
100819601
sly-u.5
for
101250424
bra-r.6
for
103834937
vvi-u.5
for
100242171
ppo-u.5
for
18099126
mtr-u.5
for
11446659
ghi-r.1
for
107912858
ghi-r.1
for
107895547
bna-r.1
for
106361284
bna-r.1
for
106436624
sot-r.1
for
102581697
cit-r.1
for
102620027
nta-r.1
for
107759901
nta-r.1
for
107778829
cre-r.1
for
CHLRE_16g673393v5


Ortholog ID: 10898
Species tae tae tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC123138522 LOC123128632 LOC123145766 LOC123406204 LOC100837791 LOC4330923 LOC100280239 LOC8082689 RecQl3 LOC100819601 LOC101250424 LOC103834937 LOC100242171 LOC18099126 LOC11446659 LOC107912858 LOC107895547 LOC106361284 LOC106436624 LOC102581697 LOC102620027 LOC107759901 LOC107778829 CHLRE_16g673393v5
Function* ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like ATP-dependent DNA helicase Q-like 3 DEAD/DEAH box RNA helicase family protein ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 ATP-dependent DNA helicase Q-like 3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03440 Homologous recombination 2
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03440 Homologous recombination 2
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 2
gma00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03440 Homologous recombination 3
mtr03460 Fanconi anemia pathway 2
mtr04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 6
ghi03440 Homologous recombination 4
ghi03460 Fanconi anemia pathway 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 4
ghi03460 Fanconi anemia pathway 2
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 5
nta04130 SNARE interactions in vesicular transport 2
nta03060 Protein export 2
nta04145 Phagosome 2
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123138522 123128632 123145766 123406204 100837791 4330923 100280239 8082689 829727 100819601 101250424 103834937 100242171 18099126 11446659 107912858 107895547 106361284 106436624 102581697 102620027 107759901 107778829 5721377
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