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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107795651   putative E3 ubiquitin-protein ligase RHG1A 
 nta-r.1   107797011   putative E3 ubiquitin-protein ligase RHG1A 
 nta-r.1   107765500   E3 ubiquitin-protein ligase MBR2 
 nta-r.1   107766941   E3 ubiquitin-protein ligase MBR2-like 
 sly-u.5   101252535   E3 ubiquitin-protein ligase MBR2 
 sly-u.5   101262398   probable E3 ubiquitin-protein ligase RHG1A 
 sly-u.5   101249818   probable E3 ubiquitin-protein ligase RHG1A 
 sot-r.1   102596025   E3 ubiquitin-protein ligase MBR2-like 
 sot-r.1   102590676   probable E3 ubiquitin-protein ligase HIP1 
 sot-r.1   107058063   E3 ubiquitin-protein ligase MBR2-like 
 ath-u.5   MBR1   RING/U-box superfamily protein 
 ath-u.5   MBR2   RING/U-box superfamily protein 
 ath-u.5   AT5G42940   RING/U-box superfamily protein 
 gma-u.5   100784575   probable E3 ubiquitin-protein ligase RHG1A 
 gma-u.5   100791026   probable E3 ubiquitin-protein ligase RHG1A 
 gma-u.5   100809024   E3 ubiquitin-protein ligase MBR2 
 bra-r.6   103847996   E3 ubiquitin-protein ligase MBR1 
 bra-r.6   103844361   E3 ubiquitin-protein ligase MBR1 
 bra-r.6   103839267   probable E3 ubiquitin-protein ligase RHG1A 
 vvi-u.5   100258840   E3 ubiquitin-protein ligase MBR2 
 vvi-u.5   100267740   probable E3 ubiquitin-protein ligase RHG1A 
 ppo-u.5   7465027   E3 ubiquitin-protein ligase MBR2 
 ppo-u.5   7462870   probable E3 ubiquitin-protein ligase RHG1A 
 ppo-u.5   7490042   E3 ubiquitin-protein ligase MBR2 
 mtr-u.5   11414526   probable E3 ubiquitin-protein ligase RHG1A 
 mtr-u.5   11446940   E3 ubiquitin-protein ligase MBR2 
 ghi-r.1   107943852   E3 ubiquitin-protein ligase MBR2 
 ghi-r.1   107905586   probable E3 ubiquitin-protein ligase RHG1A 
 ghi-r.1   107910749   probable E3 ubiquitin-protein ligase RHG1A 
 bna-r.1   106402453   probable E3 ubiquitin-protein ligase RHG1A 
 bna-r.1   106396391   probable E3 ubiquitin-protein ligase RHG1A 
 bna-r.1   106390666   probable E3 ubiquitin-protein ligase RHG1A 
 cit-r.1   102629270   probable E3 ubiquitin-protein ligase RHG1A 
 cit-r.1   102620487   E3 ubiquitin-protein ligase MBR2-like 
 cit-r.1   102620199   E3 ubiquitin-protein ligase MBR2-like 
 osa-u.5   9272591   probable E3 ubiquitin-protein ligase HIP1 
 zma-u.5   100281500   uncharacterized LOC100281500 
 zma-u.5   100383211   putative RING zinc finger domain superfamily protein 
 zma-u.5   109943116   probable E3 ubiquitin-protein ligase HIP1 
 tae-r.2   123190785   probable E3 ubiquitin-protein ligase HIP1 
 tae-r.2   123054931   probable E3 ubiquitin-protein ligase HIP1 
 tae-r.2   123047118   probable E3 ubiquitin-protein ligase HIP1 
 hvu-r.1   123428152   probable E3 ubiquitin-protein ligase HIP1 
 sbi-r.1   8068482   probable E3 ubiquitin-protein ligase HIP1 
 bdi-r.1   100835376   probable E3 ubiquitin-protein ligase HIP1 

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Top 50 coexpressed genes to 107795651 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107795651 (nta-r.1 coexpression data)

CoexMap"107795651"


ntaLOC107795651 | Entrez gene ID : 107795651      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 3 3 2 3 2 3 3 3 1 3 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (368 genes)  IEA  
Protein XP_016473811.2 [sequence] [blastp]
XP_016473812.2 [sequence] [blastp]
XP_016473813.2 [sequence] [blastp]
XP_075087135.1 [sequence] [blastp]
XP_075087136.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto_nucl 4,  cysk 1  (predict for XP_016473811.2)
nucl 8,  cyto_nucl 4,  cysk 1  (predict for XP_016473812.2)
nucl 9,  chlo 1,  vacu 1  (predict for XP_016473813.2)
nucl 8,  cyto_nucl 4,  cysk 1  (predict for XP_075087135.1)
nucl 9,  chlo 1,  vacu 1  (predict for XP_075087136.1)
Subcellular
localization
TargetP
other 6,  mito 5  (predict for XP_016473811.2)
other 6,  mito 5  (predict for XP_016473812.2)
other 5,  chlo 5  (predict for XP_016473813.2)
other 6,  mito 5  (predict for XP_075087135.1)
other 5,  chlo 5  (predict for XP_075087136.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107795651
nta-r.1
for
107797011
nta-r.1
for
107765500
nta-r.1
for
107766941
sly-u.5
for
101252535
sly-u.5
for
101262398
sly-u.5
for
101249818
sot-r.1
for
102596025
sot-r.1
for
102590676
sot-r.1
for
107058063
ath-u.5
for
MBR1
ath-u.5
for
MBR2
ath-u.5
for
AT5G42940
gma-u.5
for
100784575
gma-u.5
for
100791026
gma-u.5
for
100809024
bra-r.6
for
103847996
bra-r.6
for
103844361
bra-r.6
for
103839267
vvi-u.5
for
100258840
vvi-u.5
for
100267740
ppo-u.5
for
7465027
ppo-u.5
for
7462870
ppo-u.5
for
7490042
mtr-u.5
for
11414526
mtr-u.5
for
11446940
ghi-r.1
for
107943852
ghi-r.1
for
107905586
ghi-r.1
for
107910749
bna-r.1
for
106402453
bna-r.1
for
106396391
bna-r.1
for
106390666
cit-r.1
for
102629270
cit-r.1
for
102620487
cit-r.1
for
102620199
osa-u.5
for
9272591
zma-u.5
for
100281500
zma-u.5
for
100383211
zma-u.5
for
109943116
tae-r.2
for
123190785
tae-r.2
for
123054931
tae-r.2
for
123047118
hvu-r.1
for
123428152
sbi-r.1
for
8068482
bdi-r.1
for
100835376


Ortholog ID: 1370
Species nta nta nta sly sly sly sot sot sot ath ath ath gma gma gma bra bra vvi vvi ppo ppo ppo mtr mtr ghi ghi ghi bna cit cit cit osa zma zma zma tae tae tae hvu sbi bdi
Symbol LOC107797011 LOC107767353 LOC107768864 LOC101262398 LOC101249818 LOC101260877 LOC102587478 LOC102587147 LOC102580028 MBR2 AT5G42940 AT1G45180 LOC100809024 LOC100820322 LOC100783014 LOC103844361 LOC103828003 LOC100258840 LOC100267740 LOC7465027 LOC7462870 LOC7490042 LOC11414526 LOC11446940 LOC107938056 LOC121217803 LOC107894280 LOC106371878 LOC102629270 LOC102620487 LOC102620199 LOC9272591 LOC100281500 LOC100383211 LOC109943116 LOC123190785 LOC123054931 LOC123047118 LOC123428152 LOC8068482 LOC100835376
Function* putative E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase MBR2 putative E3 ubiquitin-protein ligase RHG1A probable E3 ubiquitin-protein ligase RHG1A probable E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase MBR2 E3 ubiquitin-protein ligase MBR2-like E3 ubiquitin-protein ligase MBR2-like E3 ubiquitin-protein ligase MBR2-like RING/U-box superfamily protein RING/U-box superfamily protein RING/U-box superfamily protein E3 ubiquitin-protein ligase MBR2 E3 ubiquitin-protein ligase MBR2 probable E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase MBR1 probable E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase MBR2 probable E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase MBR2 probable E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase MBR2 probable E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase MBR2 E3 ubiquitin-protein ligase MBR2 E3 ubiquitin-protein ligase MBR2 E3 ubiquitin-protein ligase MBR2 probable E3 ubiquitin-protein ligase RHG1A probable E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase MBR2-like E3 ubiquitin-protein ligase MBR2-like probable E3 ubiquitin-protein ligase HIP1 uncharacterized LOC100281500 putative RING zinc finger domain superfamily protein probable E3 ubiquitin-protein ligase HIP1 probable E3 ubiquitin-protein ligase HIP1 probable E3 ubiquitin-protein ligase HIP1 probable E3 ubiquitin-protein ligase HIP1 probable E3 ubiquitin-protein ligase HIP1 probable E3 ubiquitin-protein ligase HIP1 probable E3 ubiquitin-protein ligase HIP1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00310 Lysine degradation 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00310 Lysine degradation 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna00940 Phenylpropanoid biosynthesis 2
bna00240 Pyrimidine metabolism 2
bna00670 One carbon pool by folate 2
bna00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 2
cit01230 Biosynthesis of amino acids 2
cit03250 Viral life cycle - HIV-1 2
cit03272 Virion - Hepatitis viruses 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00020 Citrate cycle (TCA cycle) 2
zma00785 Lipoic acid metabolism 2
zma01200 Carbon metabolism 2
zma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00020 Citrate cycle (TCA cycle) 2
zma00785 Lipoic acid metabolism 2
zma01200 Carbon metabolism 2
zma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
tae00920 Sulfur metabolism 3
tae01320 Sulfur cycle 3
tae00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 4
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00760 Nicotinate and nicotinamide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00920 Sulfur metabolism 4
tae01320 Sulfur cycle 4
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
tae00250 Alanine, aspartate and glutamate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 3
bdi01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107797011 107767353 107768864 101262398 101249818 101260877 102587478 102587147 102580028 829550 834306 841086 100809024 100820322 100783014 103844361 103828003 100258840 100267740 7465027 7462870 7490042 11414526 11446940 107938056 121217803 107894280 106371878 102629270 102620487 102620199 9272591 100281500 100383211 109943116 123190785 123054931 123047118 123428152 8068482 100835376
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