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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123041522   protein DCL homolog, chloroplastic 
 tae-r.2   123049498   protein DCL homolog, chloroplastic 
 tae-r.2   123185605   protein DCL homolog, chloroplastic 
 hvu-r.1   123430409   protein DCL homolog, chloroplastic-like 
 bdi-r.1   100827498   protein DCL homolog, chloroplastic 
 osa-u.5   9268665   protein DCL homolog, chloroplastic 
 zma-u.5   100282044   DCL protein 
 sbi-r.1   8085935   protein DCL homolog, chloroplastic 
 ath-u.5   AT3G46630   DCL protein (DUF3223) 
 gma-u.5   100818770   protein DCL homolog, chloroplastic 
 sly-u.5   101246421   protein DCL homolog, chloroplastic 
 bra-r.6   103873593   protein DCL homolog, chloroplastic 
 vvi-u.5   100247085   protein DCL homolog, chloroplastic 
 ppo-u.5   18104844   protein DCL homolog, chloroplastic 
 ppo-u.5   18104839   protein DCL, chloroplastic 
 mtr-u.5   25489911   protein DCL homolog, chloroplastic 
 ghi-r.1   107951040   protein DCL homolog, chloroplastic 
 ghi-r.1   121214647   uncharacterized LOC121214647 
 ghi-r.1   107905603   protein DCL homolog, chloroplastic 
 bna-r.1   106347710   protein DCL homolog, chloroplastic-like 
 bna-r.1   106411203   protein DCL homolog, chloroplastic 
 sot-r.1   102585068   protein DCL, chloroplastic 
 cit-r.1   102622144   protein DCL, chloroplastic 
 nta-r.1   107826767   protein DCL homolog, chloroplastic 
 nta-r.1   107796193   protein DCL homolog, chloroplastic 

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Top 50 coexpressed genes to 123041522 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123041522 (tae-r.2 coexpression data)

CoexMap"123041522"


taeLOC123041522 | Entrez gene ID : 123041522    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 1 1 1 1 1 1 1 1 2 1 3 2 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1901259 [list] [network] chloroplast rRNA processing  (54 genes)  IEA  
GO:0009658 [list] [network] chloroplast organization  (164 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1890 genes)  IEA  
GO MF
Protein XP_044320054.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_044320054.1)
Subcellular
localization
TargetP
mito 5,  chlo 4  (predict for XP_044320054.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123041522
tae-r.2
for
123049498
tae-r.2
for
123185605
hvu-r.1
for
123430409
bdi-r.1
for
100827498
osa-u.5
for
9268665
zma-u.5
for
100282044
sbi-r.1
for
8085935
ath-u.5
for
AT3G46630
gma-u.5
for
100818770
sly-u.5
for
101246421
bra-r.6
for
103873593
vvi-u.5
for
100247085
ppo-u.5
for
18104844
ppo-u.5
for
18104839
mtr-u.5
for
25489911
ghi-r.1
for
107951040
ghi-r.1
for
121214647
ghi-r.1
for
107905603
bna-r.1
for
106347710
bna-r.1
for
106411203
sot-r.1
for
102585068
cit-r.1
for
102622144
nta-r.1
for
107826767
nta-r.1
for
107796193


Ortholog ID: 9521
Species tae tae tae hvu bdi osa zma sbi ath gma sly bra vvi ppo ppo mtr ghi ghi ghi bna bna sot cit nta nta
Symbol LOC123041522 LOC123049498 LOC123185605 LOC123430409 LOC100827498 LOC9268665 LOC100282044 LOC8085935 AT3G46630 LOC100818770 LOC101246421 LOC103873593 LOC100247085 LOC18104844 LOC18104839 LOC25489911 LOC121214647 LOC107905603 LOC107958153 LOC106347710 LOC106411203 LOC102585068 LOC102622144 LOC107826767 LOC107796193
Function* protein DCL homolog, chloroplastic protein DCL homolog, chloroplastic protein DCL homolog, chloroplastic protein DCL homolog, chloroplastic-like protein DCL homolog, chloroplastic protein DCL homolog, chloroplastic DCL protein protein DCL homolog, chloroplastic DCL protein (DUF3223) protein DCL homolog, chloroplastic protein DCL homolog, chloroplastic protein DCL homolog, chloroplastic protein DCL homolog, chloroplastic protein DCL homolog, chloroplastic protein DCL, chloroplastic protein DCL homolog, chloroplastic uncharacterized LOC121214647 protein DCL homolog, chloroplastic protein DCL homolog, chloroplastic protein DCL homolog, chloroplastic-like protein DCL homolog, chloroplastic protein DCL, chloroplastic protein DCL, chloroplastic protein DCL homolog, chloroplastic protein DCL homolog, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
tae00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 8
tae00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 7
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 5
osa00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 9
sbi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00196 Photosynthesis - antenna proteins 6
ath00195 Photosynthesis 4
ath04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00196 Photosynthesis - antenna proteins 3
bra00195 Photosynthesis 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 6
ghi03015 mRNA surveillance pathway 6
ghi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 6
ghi03015 mRNA surveillance pathway 6
ghi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 6
ghi03015 mRNA surveillance pathway 6
ghi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00340 Histidine metabolism 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta03040 Spliceosome 4
nta03018 RNA degradation 3
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123041522 123049498 123185605 123430409 100827498 9268665 100282044 8085935 823816 100818770 101246421 103873593 100247085 18104844 18104839 25489911 121214647 107905603 107958153 106347710 106411203 102585068 102622144 107826767 107796193
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