Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7479704   pentatricopeptide repeat-containing protein At1g25360 
 gma-u.5   100804309   pentatricopeptide repeat-containing protein At1g25360 
 mtr-u.5   11424440   pentatricopeptide repeat-containing protein At1g25360 
 ath-u.5   AT1G25360   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103835454   pentatricopeptide repeat-containing protein At1g25360 
 vvi-u.5   100242103   pentatricopeptide repeat-containing protein At1g25360 
 ghi-r.1   107928265   pentatricopeptide repeat-containing protein At1g25360 
 ghi-r.1   107909089   pentatricopeptide repeat-containing protein At1g25360 
 cit-r.1   102611661   pentatricopeptide repeat-containing protein At1g25360 
 sly-u.5   101245160   pentatricopeptide repeat-containing protein 
 sot-r.1   102588754   pentatricopeptide repeat-containing protein At1g25360 
 nta-r.1   107761892   pentatricopeptide repeat-containing protein At1g25360 
 osa-u.5   107277417   pentatricopeptide repeat-containing protein At1g25360 
 zma-u.5   103633371   pentatricopeptide repeat-containing protein At1g25360 
 sbi-r.1   8078978   pentatricopeptide repeat-containing protein At1g25360 
 bdi-r.1   100838951   pentatricopeptide repeat-containing protein At1g25360 

close


Top 50 coexpressed genes to 7479704 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 7479704 (ppo-m.4 coexpression data)

CoexMap"7479704"


ppoLOC7479704 | Entrez gene ID : 7479704    
Species ppo gma mtr ath bra vvi ghi cit sly sot nta osa zma sbi bdi hvu tae bna cre
Paralog 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002302000.3 [sequence] [blastp]
XP_024450567.1 [sequence] [blastp]
XP_024450568.1 [sequence] [blastp]
XP_052306201.1 [sequence] [blastp]
XP_052306202.1 [sequence] [blastp]
XP_052306203.1 [sequence] [blastp]
XP_052306204.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_002302000.3)
chlo 9  (predict for XP_024450567.1)
chlo 9  (predict for XP_024450568.1)
chlo 9  (predict for XP_052306201.1)
chlo 9  (predict for XP_052306202.1)
chlo 9  (predict for XP_052306203.1)
chlo 9  (predict for XP_052306204.1)
Subcellular
localization
TargetP
mito 7,  other 3  (predict for XP_002302000.3)
mito 7,  other 3  (predict for XP_024450567.1)
mito 7,  other 3  (predict for XP_024450568.1)
mito 7,  other 3  (predict for XP_052306201.1)
mito 7,  other 3  (predict for XP_052306202.1)
mito 7,  other 3  (predict for XP_052306203.1)
mito 7,  other 3  (predict for XP_052306204.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7479704
gma-u.5
for
100804309
mtr-u.5
for
11424440
ath-u.5
for
AT1G25360
bra-r.6
for
103835454
vvi-u.5
for
100242103
ghi-r.1
for
107928265
ghi-r.1
for
107909089
cit-r.1
for
102611661
sly-u.5
for
101245160
sot-r.1
for
102588754
nta-r.1
for
107761892
osa-u.5
for
107277417
zma-u.5
for
103633371
sbi-r.1
for
8078978
bdi-r.1
for
100838951


Ortholog ID: 11054
Species gma mtr ath bra vvi ghi ghi cit sly sot nta osa zma sbi bdi
Symbol LOC100804309 LOC11424440 AT1G25360 LOC103835454 LOC100242103 LOC107928265 LOC107909089 LOC102611661 LOC101245160 LOC102588754 LOC107761892 LOC107277417 LOC103633371 LOC8078978 LOC100838951
Function* pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360 pentatricopeptide repeat-containing protein At1g25360
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00240 Pyrimidine metabolism 3
osa01232 Nucleotide metabolism 3
osa00230 Purine metabolism 2
osa00480 Glutathione metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100804309 11424440 839121 103835454 100242103 107928265 107909089 102611661 101245160 102588754 107761892 107277417 103633371 8078978 100838951
The preparation time of this page was 0.2 [sec].