Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.6   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-u.4   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.9   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.notissue   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.tis   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.str   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.hor   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.bio   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.lig   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-e.1   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 gma-u.4   100782132   mediator of RNA polymerase II transcription subunit 15a-like 
 gma-u.4   100783762   mediator of RNA polymerase II transcription subunit 15a 
 gma-u.4   100792913   mediator of RNA polymerase II transcription subunit 15a 
 ppo-u.4   18096675   mediator of RNA polymerase II transcription subunit 15a 
 ppo-u.4   7470541   mediator of RNA polymerase II transcription subunit 15a 
 ppo-u.4   112323243   mediator of RNA polymerase II transcription subunit 15a-like 
 mtr-u.4   11430217   mediator of RNA polymerase II transcription subunit 15a 
 mtr-u.4   11442044   mediator of RNA polymerase II transcription subunit 15a 
 sly-u.4   101257852   mediator of RNA polymerase II transcription subunit 15a 
 osa-u.4   4346348   mediator of RNA polymerase II transcription subunit 15a 

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Top 50 coexpressed genes to NRB4 (ath-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath4144   Endocytosis  4 146 2.22
 ath3250   Viral life cycle - HIV-1  2 39 -
 ath3013   Nucleocytoplasmic transport  2 103 -
 ath3018   RNA degradation  2 113 -
 ath4141   Protein processing in endoplasmic reticulum  4 215 -

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ath:NRB4 (mediator of RNA polymerase II transcription subunit 15a-like protein) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-r.6
for
NRB4
ath-u.4
for
NRB4
ath-m.9
for
NRB4
ath-m.4.notissue
for
NRB4
ath-m.4.tis
for
NRB4
ath-m.4.str
for
NRB4
ath-m.4.hor
for
NRB4
ath-m.4.bio
for
NRB4
ath-m.4.lig
for
NRB4
ath-e.1
for
NRB4
gma-u.4
for
100782132
gma-u.4
for
100783762
gma-u.4
for
100792913
ppo-u.4
for
18096675
ppo-u.4
for
7470541
ppo-u.4
for
112323243
mtr-u.4
for
11430217
mtr-u.4
for
11442044
sly-u.4
for
101257852
osa-u.4
for
4346348
1 AT4G01290 chorismate synthase 828103 At4g01290 10.6 7.1
 1.8
 687.2
 3.4
 2.5
 3.7
 2.1
 1.0
 4.9
 6.6
5.2
 4.9
4.3
 3.8
3.1
 4.0
3.0
 4.3
3.0
 4.0
2.8
 4.4
 5.1
 4.3
3.1
 7.0
2 AT3G50590 Transducin/WD40 repeat-like superfamily protein 824223 At3g50590 8.6 8.6
 6.4
 599.7
 0.5
 1.3
 2.1
 3.5
 -0.2
 5.5
 4.4
4.4
 6.7
6.1
 4.9
3.7
 3.7
 2.3
 3.8
 5.2
1.0
 5.2
1.7
 5.5
 4.7
3 AT1G23230 mediator of RNA polymerase II transcription subunit 838932 At1g23230 8.5 8.1
 5.4
 51.9
 2.0
 2.1
 3.7
 2.4
 1.0
 7.5
 5.9
 6.5
 6.2
 3.4
 3.4
 3.4
 5.7
 5.2
 7.3
 6.0
4 NPH4 Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein 832196 At5g20730 8.1 8.2
 6.1
 85.1
 1.2
 2.8
 1.3
 2.7
 2.4
 9.7
 2.1
2.0
 2.7
2.4
 2.1
1.8
 4.1
2.0
 3.9
3.7
 3.9
2.1
 3.2
1.6
 6.1
3.8
 1.7
 1.2
5 EER4 Transcription initiation factor TFIID subunit A 838316 At1g17440 8.1 7.3
 4.5
 21.9
 1.5
 2.1
 3.3
 2.0
 2.4
 7.8
 5.8
 6.8
 6.8
 5.9
5.0
 5.3
4.4
 6.5
4.8
 5.9
 6.0
 7.1
-0.3
 4.0
6 AT3G24880 Helicase/SANT-associated, DNA binding protein 822086 At3g24880 8.1 7.7






6.7
 6.3
6.3
 10.2
8.6
 5.8
5.4
 5.6
3.8
 5.7
5.0
 6.1
4.0
 4.6
1.2
 6.7
1.5
 6.6
5.9
 4.1
3.5
7 AT1G72390 nuclear receptor coactivator 843571 At1g72390 8.0 7.1
 4.3
 61.8
 1.7
 2.7
 1.2
 3.9
 1.4
 12.1
 7.0
6.9
 8.1
6.5
 5.8
5.5
 4.9
4.8
 5.4
4.3
 5.4
5.0
 4.5
 9.4
 5.4
 7.1
8 AT3G24870 Helicase/SANT-associated, DNA binding protein 822085 At3g24870 8.0 7.6






6.9
 6.3
6.3
 10.2
8.6
 5.8
5.4
 5.6
3.8
 5.7
5.0
 6.1
4.0
 4.6
1.2
 6.7
1.5
 6.6
5.9
 4.1
3.5
9 AT1G21630 Calcium-binding EF hand family protein 838765 At1g21630 7.8 7.1
 4.5
 1933.0
 2.1
 0.7
 1.2
 1.6
 1.4
 7.0
 5.2
4.5
 5.9
5.6
 4.7
4.5
 2.9
2.7
 3.4
2.3
 2.8
2.4
 5.1
5.0
 6.5
5.8
 5.7
4.5
 4.7
3.6
10 EIF4G eukaryotic translation initiation factor 4G 825194 At3g60240 7.8 7.5
 5.1
 462.6
 0.9
 2.3
 2.2
 1.0
 0.6
 7.3
 4.4
4.2
 7.0
6.7
 5.4
4.9
 3.6
3.3
 3.6
3.2
 3.5
3.4
 6.5
5.0
 6.3
5.5
 6.0
1.7
 4.4
11 AT5G16680 RING/FYVE/PHD zinc finger superfamily protein 831529 At5g16680 7.7 7.4
 5.0
 15.2
 4.7
 5.4
 1.7
 3.9
 1.1
 5.3
 3.5
3.5
 5.6
5.5
 4.6
3.8
 4.7
4.4
 4.8
4.2
 4.3
3.7
 3.2
1.8
 4.2
3.3
 4.1
 3.1
2.6
12 AT4G32640 Sec23/Sec24 protein transport family protein 829399 At4g32640 7.7 6.7
 3.8
 283.2
 0.7
 1.9
 1.9
 2.9
 -0.6
 7.0
 3.4
3.2
 5.1
4.1
 4.8
3.5
 2.2
1.8
 2.5
1.5
 2.5
2.2
 4.3
 3.0
 8.5
-0.5
 1.9
-0.2
13 AT3G63460 transducin family protein / WD-40 repeat family protein 825521 At3g63460 7.7 6.0
 2.7
 1010.7
 0.3
 1.3
 1.0
 3.3
 0.2
 6.2
 3.5
3.2
 5.5
5.1
 4.0
3.9
 1.9
1.4
 1.3
0.9
 1.9
1.5
 4.3
 4.8
 6.3
 3.6
14 AT5G47480 RGPR-like protein 834798 At5g47480 7.5 7.5
 5.5
 4.2
 2.0
 5.0
 3.7
 3.0
 1.9
 6.8
 4.9
4.8
 6.6
6.0
 5.8
5.2
 3.5
3.4
 3.1
1.7
 3.6
3.2
 5.4
4.8
 6.6
5.3
 6.0
4.5
 5.1
4.1
15 KAK HECT ubiquitin protein ligase family protein KAK 830017 At4g38600 7.3 8.5
 7.4
 3.6
 1.9
 4.2
 4.7
 3.5
 3.1
 7.6
 5.0
3.8
 7.1
6.6
 5.6
5.3
 4.3
3.5
 4.7
3.8
 4.4
3.4
 6.4
 8.3
 7.1
6.9
 3.1
16 AT1G02080 transcription regulator 839244 At1g02080 7.3 8.2
 6.9
 2.8
 1.4
 4.9
 4.1
 3.1
 1.6
 7.3
 4.1
2.6
 6.7
4.9
 4.4
3.1
 4.3
3.3
 3.7
2.4
 4.2
3.4
 6.2
 5.8
 5.1
 4.9
0.6
17 AT1G79570 kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein 844295 At1g79570 7.1 6.7






3.7
 6.2
4.0
 5.1
4.8
 6.0
4.8
 4.2
3.6
 4.7
3.2
 3.5
3.4
 4.7
2.9
 3.7
3.6
 5.4
5.1
 4.3
18 AT5G15400 U-box domain-containing protein 831392 At5g15400 7.0 7.3
 5.6
 74.2
 0.6
 2.8
 2.2
 1.6
 2.0
 5.9
 3.5
2.7
 5.6
4.3
 5.3
5.1
 4.2
1.2
 2.0
0.7
 3.9
1.7
 2.8
 5.3
 3.8
 2.4
19 AT2G17190 ubiquitin family protein 816224 At2g17190 7.0 6.3






4.9
 3.8
3.1
 6.4
4.7
 4.5
3.5
 4.6
3.0
 3.3
2.8
 4.3
2.8
 4.0
3.5
 5.0
3.9
 5.8
3.9
 4.5
2.2
20 AT1G15130 Endosomal targeting BRO1-like domain-containing protein 838077 At1g15130 7.0 6.7
 4.7
 32.1
 1.9
 3.2
 2.0
 4.7
 2.1
 3.8
 5.8
5.4
 8.2
7.3
 6.5
6.1
 4.1
3.5
 5.8
3.1
 4.0
3.9
 2.3
 7.6
 5.5
4.1
 5.9
21 AT1G10390 Nucleoporin autopeptidase 837579 At1g10390 6.9 6.0
 3.4
 13.0
 0.2
 3.9
 3.3
 2.3
 2.1
 6.1
 4.0
3.7
 5.7
5.3
 4.9
4.7
 5.6
4.3
 3.6
3.0
 5.7
4.3
 4.5
-0.2
 5.6
0.2
 4.5
 5.8
0.8
22 AT3G33530 Transducin family protein / WD-40 repeat family protein 823149 At3g33530 6.9 6.2
 3.8
 298.4
 1.3
 2.1
 2.1
 1.4
 -0.0
 4.0
 2.7
 2.7
 3.3
 2.3
 1.5
 2.4
 3.6
 3.2
 4.5
 1.3
23 AMSH3 associated molecule with the SH3 domain of STAM 3 827303 At4g16144 6.9 6.0






3.7
 3.5
3.2
 5.2
4.2
 3.9
3.6
 3.2
1.5
 3.1
1.0
 3.5
1.5
 1.4
0.9
 4.8
4.4
 4.7
4.0
 3.3
1.9
24 CCT RNA polymerase II transcription mediator 827954 At4g00450 6.8 8.4
 7.6
 120.2
 2.4
 2.6
 2.0
 2.5
 1.8
 5.8
 4.4
4.0
 7.9
6.9
 5.7
5.4
 4.0
0.9
 5.4
1.0
 3.6
0.8
 3.9
3.2
 6.7
4.5
 3.7
 6.0
2.3
25 GRV2 DNAJ heat shock N-terminal domain-containing protein 817230 At2g26890 6.7 7.5
 6.2
 237.9
 2.4
 2.6
 2.6
 1.6
 -0.7
 7.2
 5.7
5.5
 7.3
7.2
 5.2
5.2
 2.4
 2.5
 2.3
 4.3
 7.9
 7.2
 5.0
26 AT3G61690 nucleotidyltransferase 825342 At3g61690 6.7 5.5
 2.9
 642.3
 1.7
 1.6
 1.7
 1.0
 0.6
 5.2
 3.2
3.0
 7.2
7.0
 5.3
4.3
 3.0
2.7
 3.0
2.8
 2.7
2.3
 3.9
 5.4
 3.2
3.1
 4.6
27 AT5G07940 dentin sialophosphoprotein-like protein 830688 At5g07940 6.6 6.4






7.9
 4.5
3.6
 7.2
7.2
 5.9
5.8
 4.6
3.9
 4.9
4.0
 4.5
3.8
 5.6
2.8
 5.6
3.8
 6.2
5.4
 6.4
2.9
28 AT5G61910 DCD (Development and Cell Death) domain protein 836312 At5g61910 6.6 5.6
 3.2
 117.8
 1.4
 2.5
 3.1
 1.4
 0.7
 5.3
 1.7
1.2
 1.8
0.2
 1.6
0.7
 2.1
-0.3
 1.6
-0.7
 2.1
-0.5
 -0.2
 0.4
 1.1
0.4
 -0.2
-0.3
29 AT1G24300 GYF domain-containing protein 839046 At1g24300 6.6 6.4






7.9
 5.1
4.0
 7.3
4.7
 4.7
3.6
 4.5
3.7
 4.5
4.2
 4.6
3.7
 2.4
 4.4
 3.5
3.0
 5.6
30 AT3G63070 Tudor/PWWP/MBT domain-containing protein 825482 At3g63070 6.5 6.5
 4.8
 140.8
 1.8
 3.2
 2.3
 1.3
 1.3
 5.2
 5.5
3.7
 8.4
8.1
 6.6
6.5
 2.5
 4.3
 2.4
 4.0
1.6
 4.2
2.6
 2.9
 4.8
4.1
31 PRT6 proteolysis 6 830916 At5g02310 6.5 6.7
 5.0
 44.1
 1.9
 2.7
 3.8
 1.6
 2.4
 5.2
 6.4
5.1
 6.4
4.5
 4.8
2.8
 2.9
 3.0
 2.9
 6.0
 9.7
 4.4
3.5
 5.1
32 SPI BEACH-DOMAIN HOMOLOG A1 839323 At1g03060 6.5 6.9
 5.4
 109.5
 1.0
 2.1
 2.4
 3.2
 -0.5
 6.7
 3.8
3.6
 7.1
6.9
 4.9
4.7
 2.7
2.4
 2.1
1.7
 2.4
2.2
 3.9
 4.4
 5.1
 3.8
33 HUA2 Tudor/PWWP/MBT domain-containing protein 832379 At5g23150 6.4 6.7
 5.1
 256.7
 2.6
 2.5
 0.7
 2.3
 0.3
 6.0
 5.2
4.1
 8.0
7.3
 6.2
5.1
 5.2
3.7
 5.9
3.9
 5.4
3.8
 5.8
4.4
 7.5
3.5
 5.5
 3.8
34 UPL2 ubiquitin-protein ligase 2 843368 At1g70320 6.4 6.3






7.3
 5.4
5.2
 8.8
7.3
 5.8
5.0
 3.3
1.3
 3.0
2.9
 3.3
1.2
 5.0
4.3
 6.1
5.8
 6.1
 5.0
35 ALA2 aminophospholipid ATPase 2 834447 At5g44240 6.4 6.1
 4.1
 170.2
 2.9
 1.7
 1.1
 3.3
 1.8
 4.9
 4.7
1.6
 5.5
2.7
 3.8
0.9
 2.5
 2.2
 2.4
 2.4
 4.3
 3.8
 1.9
1.0
36 PFT1 phytochrome and flowering time regulatory protein (PFT1) 839141 At1g25540 6.4 5.1
 2.4
 651.0
 1.8
 1.4
 2.7
 2.8
 -0.0
 7.2
 6.2
6.0
 6.9
6.3
 5.4
4.1
 4.4
3.2
 4.2
2.9
 4.8
3.2
 3.9
3.0
 4.4
3.6
 4.4
 7.0
37 RAPTOR1 Regulatory-associated protein of TOR 1 820032 At3g08850 6.3 7.2
 6.1
 20.4
 2.6
 3.2
 2.9
 3.9
 1.7
 7.4
 4.2
3.8
 5.8
4.1
 4.9
3.3
 5.7
3.3
 4.9
3.5
 5.3
3.2
 4.5
 7.6
 6.4
 3.8
3.3
38 AFH14 Formin Homology 14 840068 At1g31810 6.3 5.7
 3.5
 2358.7
 0.4
 0.5
 2.4
 -0.5
 1.2
 3.1
 4.4
2.8
 8.5
4.5
 5.4
2.7
 4.1
 2.5
 4.2
 5.0
 4.5
 3.5
 2.0
39 AT2G25320 TRAF-like family protein 817070 At2g25320 6.2 6.1






5.6
 2.6
2.4
 3.1
2.7
 3.2
2.4
 2.9
1.6
 3.0
2.0
 3.2
1.5
 3.7
 3.8
 5.9
 2.8
40 AT5G15680 ARM repeat superfamily protein 831422 At5g15680 6.2 6.5
 5.0
 528.9
 1.2
 1.8
 2.2
 2.9
 0.2
 7.3
 5.9
4.7
 7.7
5.3
 5.7
4.5
 3.2
 2.3
 3.2
 4.2
 6.2
 4.2
2.6
 3.4
41 HAC1 histone acetyltransferase of the CBP family 1 844241 At1g79000 6.2 5.2
 2.8
 511.7
 1.9
 2.9
 3.2
 0.8
 0.9
 6.3
 5.1
4.2
 8.7
8.0
 6.7
5.3
 6.7
5.9
 7.2
5.2
 6.6
6.1
 6.1
 7.2
 7.5
6.7
 6.3
42 LBA1 RNA helicase 834747 At5g47010 6.2 6.2
 4.5
 144.5
 1.1
 3.7
 3.5
 1.0
 2.3
 7.2
 2.5
2.3
 5.9
3.7
 4.7
3.1
 3.8
3.2
 4.5
2.4
 3.4
2.9
 3.7
 4.4
 4.1
3.6
 4.6
43 DL3 dynamin-like 3 842251 At1g59610 6.2 7.4
 6.6
 4.9
 2.0
 3.1
 2.7
 4.4
 1.7
 5.0
 2.1
1.6
 4.2
2.7
 3.6
3.5
 3.5
1.7
 4.7
0.0
 3.6
1.8
 4.2
2.9
 2.7
2.2
 4.3
0.1
 4.1
1.4
44 VCS Transducin/WD40 repeat-like superfamily protein 820530 At3g13300 6.2 5.8






7.1
 8.5
7.9
 9.4
7.2
 7.2
5.4
 6.4
3.6
 5.6
4.2
 5.6
3.5
 7.0
5.3
 8.8
6.4
 10.6
2.9
 4.7
4.0
45 MOM ATP-dependent helicase family protein 837322 At1g08060 6.2 5.8
 3.8
 4520.3
 1.0
 0.5
 -0.3
 0.8
 -0.8
 8.3
 3.7
2.3
 6.2
5.0
 4.4
3.9
 2.6
0.9
 2.7
0.4
 2.5
1.0
 5.1
2.2
 4.3
1.6
 5.2
-0.4
 6.8
3.0
46 AT3G48060 BAH and TFIIS domain-containing protein 823961 At3g48060 6.2 6.1






3.8
 4.0
3.5
 7.1
5.9
 5.5
5.1
 4.2
3.9
 5.3
4.8
 4.3
3.8
 4.2
 6.1
 6.4
3.6
 6.0
4.8
47 UBP12 ubiquitin-specific protease 12 830548 At5g06600 6.1 6.6
 5.3
 111.1
 1.5
 2.0
 1.5
 2.9
 0.6
 5.1
 3.7
3.6
 5.5
4.6
 4.9
4.7
 5.0
3.8
 3.9
3.6
 4.6
3.7
 2.1
2.1
 4.0
3.1
 5.5
5.0
 3.0
2.9
48 AT4G11380 Adaptin family protein 826741 At4g11380 6.1 5.5
 3.5
 1159.9
 0.2
 1.1
 2.7
 1.9
 1.4
 4.2
 4.9
4.6
 5.7
5.7
 5.4
5.2
 1.7
1.1
 1.1
0.6
 1.7
0.8
 3.3
 6.0
 3.0
 3.3
49 TOR target of rapamycin 841427 At1g50030 6.1 5.2
 2.9
 2737.5
 1.6
 0.9
 1.2
 1.4
 -1.8
 6.2
 4.9
4.5
 5.4
4.9
 2.8
2.1
 2.9
1.7
 3.2
2.9
 3.1
1.7
 4.5
 4.5
 4.2
 3.6
50 AT3G51620 PAP/OAS1 substrate-binding domain superfamily 824325 At3g51620 6.1 5.3
 3.0
 388.5
 1.6
 1.0
 3.0
 3.0
 1.3
 3.9
 2.3
1.5
 3.6
1.9
 1.4
1.0
 2.5
1.7
 3.0
2.7
 2.5
1.7
 2.8
1.8
 5.6
2.1
 1.5
1.5
 6.3
4.4
The preparation time of this page was 2.8 [sec].