Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-r.6   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.9   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.notissue   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.tis   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.str   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.hor   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.bio   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.lig   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-e.1   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 gma-u.4   100782132   mediator of RNA polymerase II transcription subunit 15a-like 
 gma-u.4   100783762   mediator of RNA polymerase II transcription subunit 15a 
 gma-u.4   100792913   mediator of RNA polymerase II transcription subunit 15a 
 ppo-u.4   18096675   mediator of RNA polymerase II transcription subunit 15a 
 ppo-u.4   7470541   mediator of RNA polymerase II transcription subunit 15a 
 ppo-u.4   112323243   mediator of RNA polymerase II transcription subunit 15a-like 
 mtr-u.4   11430217   mediator of RNA polymerase II transcription subunit 15a 
 mtr-u.4   11442044   mediator of RNA polymerase II transcription subunit 15a 
 sly-u.4   101257852   mediator of RNA polymerase II transcription subunit 15a 
 osa-u.4   4346348   mediator of RNA polymerase II transcription subunit 15a 

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Top 50 coexpressed genes to NRB4 (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath4144   Endocytosis  3 146 2.22
 ath562   Inositol phosphate metabolism  1 79 -
 ath3013   Nucleocytoplasmic transport  1 103 -
 ath4120   Ubiquitin mediated proteolysis  2 155 -
 ath4141   Protein processing in endoplasmic reticulum  3 215 -

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ath:NRB4 (mediator of RNA polymerase II transcription subunit 15a-like protein) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-u.4
for
NRB4
ath-r.6
for
NRB4
ath-m.9
for
NRB4
ath-m.4.notissue
for
NRB4
ath-m.4.tis
for
NRB4
ath-m.4.str
for
NRB4
ath-m.4.hor
for
NRB4
ath-m.4.bio
for
NRB4
ath-m.4.lig
for
NRB4
ath-e.1
for
NRB4
gma-u.4
for
100782132
gma-u.4
for
100783762
gma-u.4
for
100792913
ppo-u.4
for
18096675
ppo-u.4
for
7470541
ppo-u.4
for
112323243
mtr-u.4
for
11430217
mtr-u.4
for
11442044
sly-u.4
for
101257852
osa-u.4
for
4346348
1 AT3G50590 Transducin/WD40 repeat-like superfamily protein 824223 At3g50590 8.6 8.6
 6.4
 599.7
 0.5
 1.3
 2.1
 3.5
 -0.2
 5.5
 4.4
4.4
 6.7
6.1
 4.9
3.7
 3.7
 2.3
 3.8
 5.2
1.0
 5.2
1.7
 5.5
 4.7
2 KAK HECT ubiquitin protein ligase family protein KAK 830017 At4g38600 8.5 7.3
 7.4
 3.6
 1.9
 4.2
 4.7
 3.5
 3.1
 7.6
 5.0
3.8
 7.1
6.6
 5.6
5.3
 4.3
3.5
 4.7
3.8
 4.4
3.4
 6.4
 8.3
 7.1
6.9
 3.1
3 CCT RNA polymerase II transcription mediator 827954 At4g00450 8.4 6.8
 7.6
 120.2
 2.4
 2.6
 2.0
 2.5
 1.8
 5.8
 4.4
4.0
 7.9
6.9
 5.7
5.4
 4.0
0.9
 5.4
1.0
 3.6
0.8
 3.9
3.2
 6.7
4.5
 3.7
 6.0
2.3
4 NPH4 Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein 832196 At5g20730 8.2 8.1
 6.1
 85.1
 1.2
 2.8
 1.3
 2.7
 2.4
 9.7
 2.1
2.0
 2.7
2.4
 2.1
1.8
 4.1
2.0
 3.9
3.7
 3.9
2.1
 3.2
1.6
 6.1
3.8
 1.7
 1.2
5 AT1G02080 transcription regulator 839244 At1g02080 8.2 7.3
 6.9
 2.8
 1.4
 4.9
 4.1
 3.1
 1.6
 7.3
 4.1
2.6
 6.7
4.9
 4.4
3.1
 4.3
3.3
 3.7
2.4
 4.2
3.4
 6.2
 5.8
 5.1
 4.9
0.6
6 AT1G23230 mediator of RNA polymerase II transcription subunit 838932 At1g23230 8.1 8.5
 5.4
 51.9
 2.0
 2.1
 3.7
 2.4
 1.0
 7.5
 5.9
 6.5
 6.2
 3.4
 3.4
 3.4
 5.7
 5.2
 7.3
 6.0
7 AT3G24880 Helicase/SANT-associated, DNA binding protein 822086 At3g24880 7.7 8.1






6.7
 6.3
6.3
 10.2
8.6
 5.8
5.4
 5.6
3.8
 5.7
5.0
 6.1
4.0
 4.6
1.2
 6.7
1.5
 6.6
5.9
 4.1
3.5
8 AT3G24870 Helicase/SANT-associated, DNA binding protein 822085 At3g24870 7.6 8.0






6.9
 6.3
6.3
 10.2
8.6
 5.8
5.4
 5.6
3.8
 5.7
5.0
 6.1
4.0
 4.6
1.2
 6.7
1.5
 6.6
5.9
 4.1
3.5
9 AT5G47480 RGPR-like protein 834798 At5g47480 7.5 7.5
 5.5
 4.2
 2.0
 5.0
 3.7
 3.0
 1.9
 6.8
 4.9
4.8
 6.6
6.0
 5.8
5.2
 3.5
3.4
 3.1
1.7
 3.6
3.2
 5.4
4.8
 6.6
5.3
 6.0
4.5
 5.1
4.1
10 GRV2 DNAJ heat shock N-terminal domain-containing protein 817230 At2g26890 7.5 6.7
 6.2
 237.9
 2.4
 2.6
 2.6
 1.6
 -0.7
 7.2
 5.7
5.5
 7.3
7.2
 5.2
5.2
 2.4
 2.5
 2.3
 4.3
 7.9
 7.2
 5.0
11 EIF4G eukaryotic translation initiation factor 4G 825194 At3g60240 7.5 7.8
 5.1
 462.6
 0.9
 2.3
 2.2
 1.0
 0.6
 7.3
 4.4
4.2
 7.0
6.7
 5.4
4.9
 3.6
3.3
 3.6
3.2
 3.5
3.4
 6.5
5.0
 6.3
5.5
 6.0
1.7
 4.4
12 DL3 dynamin-like 3 842251 At1g59610 7.4 6.2
 6.6
 4.9
 2.0
 3.1
 2.7
 4.4
 1.7
 5.0
 2.1
1.6
 4.2
2.7
 3.6
3.5
 3.5
1.7
 4.7
0.0
 3.6
1.8
 4.2
2.9
 2.7
2.2
 4.3
0.1
 4.1
1.4
13 AT5G16680 RING/FYVE/PHD zinc finger superfamily protein 831529 At5g16680 7.4 7.7
 5.0
 15.2
 4.7
 5.4
 1.7
 3.9
 1.1
 5.3
 3.5
3.5
 5.6
5.5
 4.6
3.8
 4.7
4.4
 4.8
4.2
 4.3
3.7
 3.2
1.8
 4.2
3.3
 4.1
 3.1
2.6
14 PDR2 phosphate deficiency response 2 832428 At5g23630 7.3 6.0
 6.7
 70.0
 1.6
 2.6
 2.7
 1.5
 4.0
 3.7
 1.7
0.9
 2.2
1.2
 2.1
1.6
 1.8
0.7
 1.7
0.7
 1.9
0.7
 2.8
 1.4
 3.1
 2.2
15 AT5G15400 U-box domain-containing protein 831392 At5g15400 7.3 7.0
 5.6
 74.2
 0.6
 2.8
 2.2
 1.6
 2.0
 5.9
 3.5
2.7
 5.6
4.3
 5.3
5.1
 4.2
1.2
 2.0
0.7
 3.9
1.7
 2.8
 5.3
 3.8
 2.4
16 EER4 Transcription initiation factor TFIID subunit A 838316 At1g17440 7.3 8.1
 4.5
 21.9
 1.5
 2.1
 3.3
 2.0
 2.4
 7.8
 5.8
 6.8
 6.8
 5.9
5.0
 5.3
4.4
 6.5
4.8
 5.9
 6.0
 7.1
-0.3
 4.0
17 RAPTOR1 Regulatory-associated protein of TOR 1 820032 At3g08850 7.2 6.3
 6.1
 20.4
 2.6
 3.2
 2.9
 3.9
 1.7
 7.4
 4.2
3.8
 5.8
4.1
 4.9
3.3
 5.7
3.3
 4.9
3.5
 5.3
3.2
 4.5
 7.6
 6.4
 3.8
3.3
18 BIG auxin transport protein (BIG) 820398 At3g02260 7.2 6.0
 6.4
 89.2
 1.0
 3.0
 2.7
 1.7
 0.5
 7.9
 5.4
3.9
 6.2
5.6
 4.8
4.3
 1.8
 1.9
 1.9
 4.4
 4.5
 4.8
 6.8
19 AT4G01290 chorismate synthase 828103 At4g01290 7.1 10.6
 1.8
 687.2
 3.4
 2.5
 3.7
 2.1
 1.0
 4.9
 6.6
5.2
 4.9
4.3
 3.8
3.1
 4.0
3.0
 4.3
3.0
 4.0
2.8
 4.4
 5.1
 4.3
3.1
 7.0
20 AT1G21630 Calcium-binding EF hand family protein 838765 At1g21630 7.1 7.8
 4.5
 1933.0
 2.1
 0.7
 1.2
 1.6
 1.4
 7.0
 5.2
4.5
 5.9
5.6
 4.7
4.5
 2.9
2.7
 3.4
2.3
 2.8
2.4
 5.1
5.0
 6.5
5.8
 5.7
4.5
 4.7
3.6
21 AT1G72390 nuclear receptor coactivator 843571 At1g72390 7.1 8.0
 4.3
 61.8
 1.7
 2.7
 1.2
 3.9
 1.4
 12.1
 7.0
6.9
 8.1
6.5
 5.8
5.5
 4.9
4.8
 5.4
4.3
 5.4
5.0
 4.5
 9.4
 5.4
 7.1
22 AT2G41960 uncharacterized protein 818796 At2g41960 7.1 5.7
 6.5
 239.4
 2.9
 1.7
 2.1
 2.2
 2.5
 4.1
 2.9
2.8
 5.2
3.5
 4.9
3.0
 1.7
1.5
 1.9
1.5
 1.4
1.1
 5.1
3.8
 6.5
4.4
 4.2
 6.8
4.8
23 SPI BEACH-DOMAIN HOMOLOG A1 839323 At1g03060 6.9 6.5
 5.4
 109.5
 1.0
 2.1
 2.4
 3.2
 -0.5
 6.7
 3.8
3.6
 7.1
6.9
 4.9
4.7
 2.7
2.4
 2.1
1.7
 2.4
2.2
 3.9
 4.4
 5.1
 3.8
24 AT1G15130 Endosomal targeting BRO1-like domain-containing protein 838077 At1g15130 6.7 7.0
 4.7
 32.1
 1.9
 3.2
 2.0
 4.7
 2.1
 3.8
 5.8
5.4
 8.2
7.3
 6.5
6.1
 4.1
3.5
 5.8
3.1
 4.0
3.9
 2.3
 7.6
 5.5
4.1
 5.9
25 AT5G43560 TRAF-like superfamily protein 834376 At5g43560 6.7 5.9
 5.7
 166.6
 4.9
 1.8
 3.3
 1.5
 1.4
 5.0
 3.4
2.9
 5.0
4.9
 3.9
2.7
 5.9
4.7
 4.7
4.3
 5.6
5.0
 2.5
2.2
 5.9
5.6
 2.7
1.8
 4.5
26 AT1G79570 kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein 844295 At1g79570 6.7 7.1






3.7
 6.2
4.0
 5.1
4.8
 6.0
4.8
 4.2
3.6
 4.7
3.2
 3.5
3.4
 4.7
2.9
 3.7
3.6
 5.4
5.1
 4.3
27 HUA2 Tudor/PWWP/MBT domain-containing protein 832379 At5g23150 6.7 6.4
 5.1
 256.7
 2.6
 2.5
 0.7
 2.3
 0.3
 6.0
 5.2
4.1
 8.0
7.3
 6.2
5.1
 5.2
3.7
 5.9
3.9
 5.4
3.8
 5.8
4.4
 7.5
3.5
 5.5
 3.8
28 AT4G32640 Sec23/Sec24 protein transport family protein 829399 At4g32640 6.7 7.7
 3.8
 283.2
 0.7
 1.9
 1.9
 2.9
 -0.6
 7.0
 3.4
3.2
 5.1
4.1
 4.8
3.5
 2.2
1.8
 2.5
1.5
 2.5
2.2
 4.3
 3.0
 8.5
-0.5
 1.9
-0.2
29 PRT6 proteolysis 6 830916 At5g02310 6.7 6.5
 5.0
 44.1
 1.9
 2.7
 3.8
 1.6
 2.4
 5.2
 6.4
5.1
 6.4
4.5
 4.8
2.8
 2.9
 3.0
 2.9
 6.0
 9.7
 4.4
3.5
 5.1
30 UBP12 ubiquitin-specific protease 12 830548 At5g06600 6.6 6.1
 5.3
 111.1
 1.5
 2.0
 1.5
 2.9
 0.6
 5.1
 3.7
3.6
 5.5
4.6
 4.9
4.7
 5.0
3.8
 3.9
3.6
 4.6
3.7
 2.1
2.1
 4.0
3.1
 5.5
5.0
 3.0
2.9
31 AT3G63070 Tudor/PWWP/MBT domain-containing protein 825482 At3g63070 6.5 6.5
 4.8
 140.8
 1.8
 3.2
 2.3
 1.3
 1.3
 5.2
 5.5
3.7
 8.4
8.1
 6.6
6.5
 2.5
 4.3
 2.4
 4.0
1.6
 4.2
2.6
 2.9
 4.8
4.1
32 AT3G50370 uncharacterized protein 824199 At3g50370 6.5 5.2
 6.0
 113.6
 2.1
 3.1
 2.2
 2.7
 0.0
 9.0
 7.2
6.2
 6.9
5.1
 6.0
6.0
 4.6
3.4
 4.2
4.1
 4.6
3.2
 6.1
 6.1
 7.0
 10.0
33 AT5G15680 ARM repeat superfamily protein 831422 At5g15680 6.5 6.2
 5.0
 528.9
 1.2
 1.8
 2.2
 2.9
 0.2
 7.3
 5.9
4.7
 7.7
5.3
 5.7
4.5
 3.2
 2.3
 3.2
 4.2
 6.2
 4.2
2.6
 3.4
34 AT5G07940 dentin sialophosphoprotein-like protein 830688 At5g07940 6.4 6.6






7.9
 4.5
3.6
 7.2
7.2
 5.9
5.8
 4.6
3.9
 4.9
4.0
 4.5
3.8
 5.6
2.8
 5.6
3.8
 6.2
5.4
 6.4
2.9
35 NUP1 nuclear pore complex protein 820234 At3g10650 6.4 4.6
 6.4
 85.4
 0.6
 2.5
 2.2
 2.0
 2.1
 6.9
 4.9
4.1
 7.0
6.4
 5.6
4.2
 2.3
2.0
 4.9
3.2
 2.4
2.3
 4.8
2.8
 5.9
4.9
 3.0
2.9
 4.6
36 AT1G24300 GYF domain-containing protein 839046 At1g24300 6.4 6.6






7.9
 5.1
4.0
 7.3
4.7
 4.7
3.6
 4.5
3.7
 4.5
4.2
 4.6
3.7
 2.4
 4.4
 3.5
3.0
 5.6
37 AT2G17190 ubiquitin family protein 816224 At2g17190 6.3 7.0






4.9
 3.8
3.1
 6.4
4.7
 4.5
3.5
 4.6
3.0
 3.3
2.8
 4.3
2.8
 4.0
3.5
 5.0
3.9
 5.8
3.9
 4.5
2.2
38 AT1G27430 GYF domain-containing protein 839633 At1g27430 6.3 5.5
 5.3
 1339.5
 2.2
 1.3
 0.9
 0.9
 0.9
 7.3
 5.1
4.0
 7.3
4.7
 4.7
3.6
 4.5
3.7
 4.5
4.2
 4.6
3.7
 2.4
 4.4
 3.5
3.0
 5.6
39 UPL2 ubiquitin-protein ligase 2 843368 At1g70320 6.3 6.4






7.3
 5.4
5.2
 8.8
7.3
 5.8
5.0
 3.3
1.3
 3.0
2.9
 3.3
1.2
 5.0
4.3
 6.1
5.8
 6.1
 5.0
40 AT3G62240 RING/U-box superfamily protein 825397 At3g62240 6.2 4.4
 6.3
 23.7
 2.5
 2.7
 2.5
 2.8
 0.9
 7.0
 2.6
1.3
 4.2
2.3
 3.1
1.6
 3.1
1.8
 3.9
2.8
 3.2
1.6
 2.2
 5.6
 3.4
 2.7
41 MOS1 modifier of snc1 828570 At4g24680 6.2 6.0
 4.8
 309.3
 0.7
 1.8
 1.7
 2.7
 0.2
 7.4
 5.3
5.0
 10.2
9.1
 6.8
6.6
 5.8
4.8
 5.3
5.0
 5.9
4.7
 6.1
4.6
 7.4
4.4
 4.6
 7.2
42 AT3G51120 zinc finger CCCH domain-containing protein 44 824276 At3g51120 6.2 5.8
 5.0
 433.1
 1.0
 2.0
 1.9
 2.1
 0.3
 7.1
 3.5
3.2
 8.8
6.3
 6.3
5.7
 4.0
3.9
 3.6
3.3
 3.9
3.8
 2.0
2.0
 4.6
3.2
 4.5
2.9
 4.8
4.8
43 LBA1 RNA helicase 834747 At5g47010 6.2 6.2
 4.5
 144.5
 1.1
 3.7
 3.5
 1.0
 2.3
 7.2
 2.5
2.3
 5.9
3.7
 4.7
3.1
 3.8
3.2
 4.5
2.4
 3.4
2.9
 3.7
 4.4
 4.1
3.6
 4.6
44 AT3G33530 Transducin family protein / WD-40 repeat family protein 823149 At3g33530 6.2 6.9
 3.8
 298.4
 1.3
 2.1
 2.1
 1.4
 -0.0
 4.0
 2.7
 2.7
 3.3
 2.3
 1.5
 2.4
 3.6
 3.2
 4.5
 1.3
45 AT3G48060 BAH and TFIIS domain-containing protein 823961 At3g48060 6.1 6.2






3.8
 4.0
3.5
 7.1
5.9
 5.5
5.1
 4.2
3.9
 5.3
4.8
 4.3
3.8
 4.2
 6.1
 6.4
3.6
 6.0
4.8
46 emb1507 U5 small nuclear ribonucleoprotein helicase 838690 At1g20960 6.1 5.1
 5.5
 1733.2
 -0.3
 0.4
 3.0
 1.5
 2.5
 6.4
 3.3
3.0
 6.6
5.3
 6.3
4.8
 2.8
2.3
 3.1
2.2
 3.0
2.4
 3.0
0.2
 5.7
2.3
 4.0
2.3
 6.4
47 AT2G25320 TRAF-like family protein 817070 At2g25320 6.1 6.2






5.6
 2.6
2.4
 3.1
2.7
 3.2
2.4
 2.9
1.6
 3.0
2.0
 3.2
1.5
 3.7
 3.8
 5.9
 2.8
48 ALY3 DNA binding protein 821697 At3g21430 6.1 5.7
 4.8
 139.1
 2.3
 2.2
 3.2
 1.9
 0.8
 4.4
 3.4
1.6
 3.1
2.8
 2.7
2.6
 1.6
1.2
 1.7
1.6
 1.5
0.9
 3.2
2.8
 4.1
3.2
 4.6
3.1
 2.7
49 ALA2 aminophospholipid ATPase 2 834447 At5g44240 6.1 6.4
 4.1
 170.2
 2.9
 1.7
 1.1
 3.3
 1.8
 4.9
 4.7
1.6
 5.5
2.7
 3.8
0.9
 2.5
 2.2
 2.4
 2.4
 4.3
 3.8
 1.9
1.0
50 FAB1A 1-phosphatidylinositol-3-phosphate 5-kinase FAB1A 829460 At4g33240 6.0 4.7
 5.8
 604.9
 3.3
 1.9
 1.9
 1.1
 2.8
 4.9
 5.9
5.1
 6.2
5.1
 6.2
5.2
 2.3
1.8
 2.5
2.2
 1.9
1.6
 4.0
2.0
 6.0
3.6
 2.8
2.0
 2.8
0.5
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