GO:0000398 mRNA splicing, via spliceosome
| 112 ath genes in this database. |
| 282 gma genes in this database. |
| 162 sly genes in this database. |
| 162 osa genes in this database. |
| 175 zma genes in this database. |
| 258 bra genes in this database. |
| 134 vvi genes in this database. |
| 213 ppo genes in this database. |
| 155 mtr genes in this database. |
| 447 tae genes in this database. |
| 187 hvu genes in this database. |
| 384 ghi genes in this database. |
| 548 bna genes in this database. |
| 103 cre genes in this database. |
| 170 sbi genes in this database. |
| 151 sot genes in this database. |
| 155 cit genes in this database. |
| 166 bdi genes in this database. |
| 282 nta genes in this database. |
[QuickGO]
term: mRNA splicing, via spliceosome
goid: GO:0000398
Shaded genes do not have GeneChip data. The output was limited up to 10000.
| Species | Symbol | Gene coexpression |
Locus page |
Full name* | Entrez Gene ID | Evidence* |
|---|---|---|---|---|---|---|
| ath | GRP7 | cold, circadian rhythm, and rna binding 2 | 816705 | |||
| ath | U2B'' | U2 small nuclear ribonucleoprotein B | 817576 | |||
| ath | AT2G33730 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | 817938 | IMP | ||
| ath | RS2Z33 | arginine/serine-rich zinc knuckle-containing protein 33 | 818311 | TAS | ||
| ath | EMB2765 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | 818459 | IEA | ||
| ath | SAC3A | SAC3/GANP/Nin1/mts3/eIF-3 p25 family | 818519 | |||
| ath | LIS | WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-like protein | 818748 | ISS | ||
| ath | AT2G43770 | Transducin/WD40 repeat-like superfamily protein | 818980 | IMP | ||
| ath | AT2G43960 | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein | 819001 | |||
| ath | U1A | spliceosomal protein U1A | 819371 | ISS | ||
| ath | AT3G07790 | DGCR14-like protein | 819970 | IPI | ||
| ath | AT3G07860 | Ubiquitin-like superfamily protein | 819977 | IEA | ||
| ath | U11/U12-31K | RNA recognition motif and CCHC-type zinc finger domains containing protein | 820203 | IMP | ||
| ath | EMB2769 | Cwf15 / Cwc15 cell cycle control family protein | 820510 | IEA | ||
| ath | SCL30A | SC35-like splicing factor 30A | 820559 | IGI,TAS | ||
| ath | AT3G14700 | SART-1 family | 820698 | IEA | ||
| ath | UNE6 | LUC7 related protein | 821276 | |||
| ath | AT3G18790 | pre-mRNA-splicing factor ISY1-like protein | 821412 | |||
| ath | AT3G24730 | mRNA splicing factor, thioredoxin-like U5 snRNP | 822071 | |||
| ath | AT3G25840 | Protein kinase superfamily protein | 822178 | |||
| ath | AT3G26020 | Protein phosphatase 2A regulatory B subunit family protein | 822199 | IMP | ||
| ath | AT3G27600 | SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein | 822382 | |||
| ath | AT3G48120 | serine/arginine-rich splicing factor | 823967 | |||
| ath | AT3G49130 | SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein | 824074 | |||
| ath | U1-70K | U1 small nuclear ribonucleoprotein-70K | 824230 | IDA | ||
| ath | RS2Z32 | RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein | 824518 | TAS | ||
| ath | AT3G53640 | Protein kinase superfamily protein | 824532 | |||
| ath | SUA | suppressor of abi3-5 | 824590 | IMP | ||
| ath | SCL30 | SC35-like splicing factor 30 | 824712 | TAS | ||
| ath | AT3G56790 | RNA splicing factor-like protein | 824846 | IEA | ||
| ath | AT3G61360 | Tetratricopeptide repeat (TPR)-like superfamily protein | 825308 | IMP | ||
| ath | RS31 | RNA-binding (RRM/RBD/RNP motifs) family protein | 825359 | IDA | ||
| ath | AT4G16200 | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein | 827313 | |||
| ath | smB | small nuclear ribonucleoprotein associated protein B | 827792 | TAS | ||
| ath | EMB2770 | pre-mRNA splicing factor-like protein | 827925 | ISS | ||
| ath | SIC | hydroxyproline-rich glycoprotein family protein | 828552 | IMP | ||
| ath | AT4G25020 | D111/G-patch domain-containing protein | 828605 | IEA | ||
| ath | RS40 | arginine/serine-rich splicing factor 35 | 828654 | ISS | ||
| ath | PIRL8 | plant intracellular ras group-related LRR 8 | 828711 | |||
| ath | RSZ22 | serine/arginine-rich 22 | 829285 | TAS | ||
| ath | AT4G32270 | Ubiquitin-like superfamily protein | 829360 | IEA | ||
| ath | AT4G33370 | DEA(D/H)-box RNA helicase family protein | 829474 | IEA | ||
| ath | ATU2AF65A | U2 snRNP auxilliary factor, large subunit, splicing factor | 829822 | ISS | ||
| ath | BGAL14 | beta-galactosidase 14 | 830016 | IEA | ||
| ath | CCR1 | cold, circadian rhythm, and RNA binding 1 | 830082 | |||
| ath | AT5G06520 | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein | 830540 | |||
| ath | AT5G06890 | Ubiquitin-like superfamily protein | 830579 | |||
| ath | YLS8 | mRNA splicing factor, thioredoxin-like U5 snRNP | 830725 | IEA | ||
| ath | ILP1 | GC-rich sequence DNA-binding factor-like protein | 830755 | IMP | ||
| ath | AT5G09210 | GC-rich sequence DNA-binding factor-like protein | 830780 | IEA | ||
| ath | AT5G12280 | SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein | 831103 | |||
| ath | EMB3011 | RNA helicase family protein | 831141 | IMP | ||
| ath | ELF9 | RNA binding (RRM/RBD/RNP motifs) family protein | 831486 | IEA | ||
| ath | DOT2 | SART-1 family | 831541 | IEA | ||
| ath | AT5G17440 | LUC7 related protein | 831610 | |||
| ath | SCL28 | SC35-like splicing factor 28 | 831999 | TAS | ||
| ath | AT5G19350 | RNA-binding (RRM/RBD/RNP motifs) family protein | 832055 | IMP | ||
| ath | AT5G25340 | Ubiquitin-like superfamily protein | 832606 | IEA | ||
| ath | AT5G27860 | uncharacterized protein | 832849 | IDA | ||
| ath | AT5G28740 | Tetratricopeptide repeat (TPR)-like superfamily protein | 832986 | IMP | ||
| ath | AT5G45990 | crooked neck protein, putative / cell cycle protein | 834639 | IEA | ||
| ath | AT5G51280 | DEAD-box protein abstrakt | 835202 | IEA | ||
| ath | AT5G51410 | LUC7 N terminus domain-containing protein | 835215 | |||
| ath | RS41 | RNA-binding (RRM/RBD/RNP motifs) family protein | 835279 | ISS | ||
| ath | AT5G58020 | RTF2 RING-finger protein | 835914 | |||
| ath | AT5G62290 | nucleotide-sensitive chloride conductance regulator (ICln) family protein | 836350 | IGI | ||
| ath | AT5G63370 | Protein kinase superfamily protein | 836456 | IMP | ||
| ath | SC35 | serine/arginine-rich splicing factor-like protein, putative | 836541 | TAS | ||
| ath | AT5G64270 | splicing factor | 836548 | |||
| ath | AT1G07170 | PHF5-like protein | 837228 | ISS | ||
| ath | AT1G09230 | RNA-binding (RRM/RBD/RNP motifs) family protein | 837443 | IDA,IMP | ||
| ath | U2A' | U2 small nuclear ribonucleoprotein A | 837505 | IDA | ||
| ath | AT1G10580 | Transducin/WD40 repeat-like superfamily protein | 837599 | IEA | ||
| ath | AT1G13350 | Protein kinase superfamily protein | 837895 | |||
| ath | AT1G14640 | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein | 838026 | |||
| ath | AT1G14650 | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein | 838027 | ISS | ||
| ath | SR45 | arginine/serine-rich 45 | 838230 | IPI | ||
| ath | STIPL1 | GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain-containing protein | 838277 | IMP | ||
| ath | AT1G17130 | coiled-coil protein (DUF572) | 838283 | IEA | ||
| ath | AT1G18050 | SWAP/surp RNA-binding domain protein | 838385 | |||
| ath | AT1G20580 | Small nuclear ribonucleoprotein family protein | 838647 | IMP | ||
| ath | RSZ21 | RS-containing zinc finger protein 21 | 838997 | TAS | ||
| ath | AT1G01940 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein | 839309 | IMP | ||
| ath | AT1G03910 | cactus-binding carboxy-terminal, cactin | 839371 | ISS | ||
| ath | AT1G03140 | splicing factor Prp18 family protein | 839567 | |||
| ath | AT1G28060 | Pre-mRNA-splicing factor 3 | 839699 | IMP | ||
| ath | DRT111 | D111/G-patch domain-containing protein | 839927 | |||
| ath | AT1G31870 | pre-mRNA-splicing factor of RES complex protein | 840077 | IGI | ||
| ath | MOS2 | D111/G-patch domain-containing protein | 840246 | IEA | ||
| ath | AT1G54380 | spliceosome protein-like protein | 841879 | |||
| ath | SCL33 | SC35-like splicing factor 33 | 841976 | IPI | ||
| ath | AT1G60900 | U2 snRNP auxilliary factor, large subunit, splicing factor | 842382 | IMP | ||
| ath | SmD3 | snRNP core protein SMD3 | 843963 | IMP | ||
| ath | SKIP | chromatin protein family | 844055 | IPI | ||
| ath | AT1G80060 | Ubiquitin-like superfamily protein | 844346 | IEA | ||
| ath | SUS2 | Pre-mRNA-processing-splicing factor | 844347 | IMP | ||
| ath | AT3G44785 | Zinc finger C-x8-C-x5-C-x3-H type family protein | 2745945 | IEA | ||
| ath | U1.5 | 3766679 | TAS | |||
| ath | U12 | 3767596 | ISS | |||
| ath | AT2G29430 | coiled-coil protein (DUF572) | 3768235 | IEA | ||
| ath | U6-26 | 3768861 | TAS | |||
| ath | U2.6 | 3769727 | ||||
| ath | U2.4 | 3769728 | ||||
| ath | U2.2 | 3769730 | ||||
| ath | U2.3 | 3769731 | ||||
| ath | U6acat | 3771384 | TAS | |||
| ath | U6-29 | 3771447 | TAS | |||
| ath | U2.7 | 3771548 | ||||
| ath | AT2G14285 | Small nuclear ribonucleoprotein family protein | 5007874 | |||
| ath | U4.2 | 28718958 | TAS | |||
| ath | U6-1 | 28719273 | TAS | |||
| ath | U2.5 | 28721113 |
