cis; ACACGTG

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
GGACACGTGGC  ABRETAEM [ref] [ref] [ref]
TGACACGTGGCA HY5AT [ref] [ref] [ref]
  MCACGTGGC  GBOXLERBCS [ref] [ref] [ref]
   CACGTG    CACGTGMOTIF [ref] [ref] [ref] [ref] [ref] [ref] [ref]
    ACGTG    ABRELATERD1 [ref]
    ACGT     ACGTATERD1 [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of ACACGTG

[Help]
GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of ACACGTG.

[Help]
correlTFfunction ((alias))*TF family
(link to AGRIS)
0.60At4g27410no apical meristem (NAM) family protein (RD26) ((RD26)) NAC
0.60At5g12840CCAAT-binding transcription factor (CBF-B/NF-YA) family protein ((HAP2A)) CCAAT-HAP2
0.55At3g61890homeobox-leucine zipper protein 12 (HB-12) / HD-ZIP transcription factor 12 ((ATHB-12)) Homeobox
0.54At2g46270G-box binding factor 3 (GBF3) ((GBF3)) bZIP
0.51At1g77450no apical meristem (NAM) family protein NAC
0.51At1g01720no apical meristem (NAM) family protein ((ATAF1)) NAC
0.49At1g52890no apical meristem (NAM) family protein NAC
0.49At2g46680homeobox-leucine zipper protein 7 (HB-7) / HD-ZIP transcription factor 7 ((ATHB-7)) Homeobox
0.48At5g60850Dof-type zinc finger domain-containing protein ((OBP4)) C2C2-Dof
0.47At4g34000ABA-responsive element-binding protein / abscisic acid responsive elements-binding factor (ABRE) / ABA-responsive elements-binding factor (ABF3) ((ABF3, DPBF5)) bZIP
0.47At4g05100myb family transcription factor (MYB74) MYB
0.46At1g56170transcription factor, putative ((HAP5B)) CCAAT-HAP5
0.45At5g24930zinc finger (B-box type) family protein C2C2-CO-like
0.44At4g36900AP2 domain-containing protein RAP2.10 (RAP2.10) AP2-EREBP
0.44At1g03970G-box binding factor 4 (GBF4) ((GBF4)) bZIP

link to other 304 cis elements in ATTED

similar seq.
←ACACGTG→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CACGTGT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
ACACGTG1.000.1162
ACGTGTC0.950.1184
GACACGT0.930.0976
CACGTGT0.930.1292
CGTGTCA0.930.0889
CACGTGG0.920.09112
TACACGT0.890.09112
CGTGGCA0.860.08110
CGTGTCC0.860.0882
ACGTGGC0.850.09104