cis; CGTGTCA


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CGTGTCA

[Help]
GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CGTGTCA.

[Help]
correlTFfunction ((alias))*TF family
(link to AGRIS)
0.59At4g27410no apical meristem (NAM) family protein (RD26) ((RD26)) NAC
0.59At5g12840CCAAT-binding transcription factor (CBF-B/NF-YA) family protein ((HAP2A)) CCAAT-HAP2
0.53At3g19290ABA-responsive element-binding protein 2 (AREB2) ((ABF4, AREB2)) bZIP
0.51At5g47390myb family transcription factor MYB-related
0.51At5g60850Dof-type zinc finger domain-containing protein ((OBP4)) C2C2-Dof
0.50At5g24930zinc finger (B-box type) family protein C2C2-CO-like
0.49At4g37180myb family transcription factor G2-like
0.49At1g03970G-box binding factor 4 (GBF4) ((GBF4)) bZIP
0.49At3g61890homeobox-leucine zipper protein 12 (HB-12) / HD-ZIP transcription factor 12 ((ATHB-12)) Homeobox
-0.48At3g16870zinc finger (GATA type) family protein C2C2-Gata
0.47At1g50600scarecrow-like transcription factor 5 (SCL5) GRAS
0.46At4g36900AP2 domain-containing protein RAP2.10 (RAP2.10) AP2-EREBP
-0.46At3g14740PHD finger family protein C2H2
0.45At5g49450bZIP family transcription factor bZIP
0.45At3g30210myb family transcription factor (MYB121) ((MYB121)) MYB

link to other 304 cis elements in ATTED

similar seq.
CGTGTCA
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TGACACG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CGTGTCA1.000.0889
ACGTGTC0.970.1184
CACGTGT0.940.1292
ACACGTG0.930.1162
GACACGT0.890.0976
CACGTGG0.860.09112
ACGTGTA0.860.0682
CGTGGCA0.850.08110
TACACGT0.840.09112
CGTGTCC0.840.0882