cis; GACACGT

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
 GACACGTAGA  ACEATCHS [ref] [ref]
GGACACGTGGC  ABRETAEM [ref] [ref] [ref]
TGACACGTGGCA HY5AT [ref] [ref] [ref]
    ACGT     ACGTATERD1 [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of GACACGT

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of GACACGT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.65At4g27410no apical meristem (NAM) family protein (RD26) ((RD26)) NAC
0.57At1g77450no apical meristem (NAM) family protein NAC
0.57At1g01720no apical meristem (NAM) family protein ((ATAF1)) NAC
0.54At2g46680homeobox-leucine zipper protein 7 (HB-7) / HD-ZIP transcription factor 7 ((ATHB-7)) Homeobox
0.53At1g52890no apical meristem (NAM) family protein NAC
0.52At5g12840CCAAT-binding transcription factor (CBF-B/NF-YA) family protein ((HAP2A)) CCAAT-HAP2
0.52At4g05100myb family transcription factor (MYB74) MYB
0.51At2g46270G-box binding factor 3 (GBF3) ((GBF3)) bZIP
0.51At4g21440myb family transcription factor (MYB102) MYB
0.49At3g19580zinc finger (C2H2 type) protein 2 (AZF2) ((AZF2)) C2H2
0.49At3g61890homeobox-leucine zipper protein 12 (HB-12) / HD-ZIP transcription factor 12 ((ATHB-12)) Homeobox
0.48At1g51140basic helix-loop-helix (bHLH) family protein BHLH
-0.48At5g16070chaperonin, putative TCP
0.48At3g19290ABA-responsive element-binding protein 2 (AREB2) ((ABF4, AREB2)) bZIP
0.47At5g47640CCAAT-box binding transcription factor subunit B (NF-YB) (HAP3 ) (AHAP3) family (Hap3b) CCAAT-HAP3

link to other 304 cis elements in ATTED

similar seq.
←GACACGT→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; ACGTGTC
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
GACACGT1.000.0976
ACACGTG0.930.1162
ACGTGTC0.900.1184
CACGTGG0.890.09112
CGTGTCA0.890.0889
ACGTGGC0.890.09104
CACGTGT0.860.1292
CGTGGCA0.850.08110
CGTGTCC0.830.0882
TACACGT0.830.09112