cis; ACAGCTG

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of ACAGCTG

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of ACAGCTG.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.64At1g21910AP2 domain-containing transcription factor family protein AP2-EREBP
0.59At2g23290myb family transcription factor MYB
0.55At3g54810zinc finger (GATA type) family protein C2C2-Gata
0.54At3g62420bZIP transcription factor family protein bZIP
0.52At3g50060myb family transcription factor MYB
0.51At5g67300myb family transcription factor MYB
0.48At2g31730ethylene-responsive protein, putative BHLH
0.46At4g36730G-box binding factor 1 (GBF1) ((GBF1)) bZIP
0.46At1g22510zinc finger (C3HC4-type RING finger) family protein C3H
0.45At4g01250WRKY family transcription factor ((WRKY22)) WRKY
0.44At3g20310ethylene-responsive element-binding family protein ((ATERF7)) AP2-EREBP
0.44At3g52800zinc finger (AN1-like) family protein C2H2
0.44At1g77640AP2 domain-containing transcription factor, putative AP2-EREBP
0.44At5g25190ethylene-responsive element-binding protein, putative AP2-EREBP
0.43At4g37260myb family transcription factor (MYB73) MYB

link to other 304 cis elements in ATTED

similar seq.
←ACAGCTG→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CAGCTGT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
ACAGCTG1.000.07144
CAGCTGT0.820.08171
AGCTGTT0.770.07127
AAACGCG0.720.07149
CCTCTCT0.690.0657
ACGCGCT0.690.09111
AACGCGC0.660.0696
CCTTCCT0.660.0648
ACCGCGT0.640.1098
AAGCGCG0.640.0773