cis; CAGCTGT

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CAGCTGT

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CAGCTGT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.68At5g67300myb family transcription factor MYB
0.67At1g21910AP2 domain-containing transcription factor family protein AP2-EREBP
0.62At3g52800zinc finger (AN1-like) family protein C2H2
0.61At3g62420bZIP transcription factor family protein bZIP
0.60At3g54810zinc finger (GATA type) family protein C2C2-Gata
0.57At3g50060myb family transcription factor MYB
0.56At5g49520WRKY family transcription factor ((WRKY48)) WRKY
0.56At2g23290myb family transcription factor MYB
0.56At1g77640AP2 domain-containing transcription factor, putative AP2-EREBP
0.56At4g31800WRKY family transcription factor ((WRKY18)) WRKY
0.54At4g37260myb family transcription factor (MYB73) MYB
0.54At1g28370ERF domain protein 11 (ERF11) AP2-EREBP
0.52At3g49530no apical meristem (NAM) family protein NAC
0.52At3g15210ethylene-responsive element-binding factor 4 (ERF4) ((ATERF4, RAP2.5)) AP2-EREBP
0.52At4g01250WRKY family transcription factor ((WRKY22)) WRKY

link to other 304 cis elements in ATTED

similar seq.
←CAGCTGT→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; ACAGCTG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CAGCTGT1.000.08171
AGCTGTT0.840.07127
ACAGCTG0.820.07144
AAACGCG0.820.07149
AACGCGT0.780.10127
AACGCGC0.780.0696
CGCGTTT0.760.1193
AACCGCG0.760.0985
ACGCGCT0.760.09111
CCTTCCT0.760.0648