cis; ATCCACA


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of ATCCACA

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of ATCCACA.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
-0.60At5g22480zinc finger (ZPR1-type) family protein C2H2
0.59At1g68190zinc finger (B-box type) family protein C2C2-CO-like
0.57At3g11110zinc finger (C3HC4-type RING finger) family protein C3H
0.56At1g34310transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related ARF
0.55At5g44190myb family transcription factor (GLK2) ((GLK2, GPRI2)) G2-like
0.54At2g18300basic helix-loop-helix (bHLH) family protein BHLH
-0.51At1g47870E2F transcription factor-2 (E2F2) / transcription factor E2Fc (E2Fc) ((E2FC)) E2F-DP
0.51At1g68520zinc finger (B-box type) family protein C2C2-CO-like
0.50At2g41940zinc finger (C2H2 type) family protein ((ZFP8)) C2H2
0.50At5g08330TCP family transcription factor, putative TCP
0.50At3g59060basic helix-loop-helix (bHLH) family protein ((PIL6)) BHLH
0.49At1g33240trihelix DNA-binding protein, putative Trihelix
0.49At5g56860zinc finger (GATA type) family protein C2C2-Gata
0.49At5g60970TCP family transcription factor, putative TCP
0.48At5g20220zinc knuckle (CCHC-type) family protein C2H2

link to other 304 cis elements in ATTED

similar seq.
ATCCACA
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TGTGGAT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
ATCCACA1.000.0653
TTATCCA0.920.1054
CTTATCT0.910.0821
TATCCAC0.900.0753
CTTATCC0.900.1153
AGATAAG0.890.0838
GATAAGG0.880.0739
TCTTATC0.880.0923
AGCCACA0.870.0653
ATCTTAT0.870.0723