cis; CCGTGTT


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CCGTGTT

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CCGTGTT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.60At5g03720heat shock transcription factor family protein ((AT-HSFA3)) HSF
0.56At4g17230scarecrow-like transcription factor 13 (SCL13) GRAS
0.54At4g32800AP2 domain-containing transcription factor TINY, putative AP2-EREBP
0.51At5g01380expressed protein Trihelix
0.50At5g66070zinc finger (C3HC4-type RING finger) family protein C3H
-0.48At4g31920two-component responsive regulator family protein / response regulator family protein ((ARR10)) ARR-B
0.48At3g50260AP2 domain-containing transcription factor, putative AP2-EREBP
-0.47At2g28350auxin-responsive factor (ARF10) ARF
0.47At1g28370ERF domain protein 11 (ERF11) AP2-EREBP
0.47At2g38250DNA-binding protein-related Trihelix
0.47At1g19310zinc finger (C3HC4-type RING finger) family protein C3H
0.46At2g30250WRKY family transcription factor ((WRKY25)) WRKY
0.46At1g64380AP2 domain-containing transcription factor, putative AP2-EREBP
0.46At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.45At1g76580SPL1-Related3 protein (SPL1R3) SBP

link to other 304 cis elements in ATTED

similar seq.
CCGTGTT
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; AACACGG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CCGTGTT1.000.08145
ACCGTGT0.860.07144
CCGACAT0.710.0788
GCCGACA0.710.08121
ACGCGTA0.710.1074
CGCGTAA0.680.07199
CACGCGT0.670.0774
CCGCGTT0.670.1017
TGTCGAC0.660.08160
CGCGTTT0.650.1193