cis; CCGTGTG


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CCGTGTG

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CCGTGTG.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.65At4g34410AP2 domain-containing transcription factor, putative AP2-EREBP
0.60At1g28370ERF domain protein 11 (ERF11) AP2-EREBP
0.58At2g44840ethylene-responsive element-binding protein, putative AP2-EREBP
0.58At2g46510basic helix-loop-helix (bHLH) family protein BHLH
0.57At1g12610DRE-binding protein, putative / CRT/DRE-binding factor, putative ((DDF1)) AP2-EREBP
0.57At3g15210ethylene-responsive element-binding factor 4 (ERF4) ((ATERF4, RAP2.5)) AP2-EREBP
0.56At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.55At3g50060myb family transcription factor MYB
0.54At1g20823zinc finger (C3HC4-type RING finger) family protein C3H
0.53At4g31800WRKY family transcription factor ((WRKY18)) WRKY
0.53At3g52800zinc finger (AN1-like) family protein C2H2
0.52At1g32640basic helix-loop-helix (bHLH) protein (RAP-1) ((ATMYC2)) BHLH
0.51At5g67300myb family transcription factor MYB
0.50At2g45680TCP family transcription factor, putative TCP
0.50At5g62470myb family transcription factor (MYB96) ((MYB96)) MYB

link to other 304 cis elements in ATTED

similar seq.
CCGTGTG
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CACACGG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CCGTGTG1.000.0770
AAACGCG0.820.07149
AACGCGT0.820.10127
ATACGCG0.810.0639
ACGCGTT0.810.1096
AACCGTG0.810.07113
CGCGTTT0.810.1193
AACGCGC0.810.0696
TTACGCG0.800.07194
TAACGCG0.800.0762