cis; CCGTGTG

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CCGTGTG

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CCGTGTG.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.65At4g34410AP2 domain-containing transcription factor, putative AP2-EREBP
0.60At1g28370ERF domain protein 11 (ERF11) AP2-EREBP
0.58At2g44840ethylene-responsive element-binding protein, putative AP2-EREBP
0.58At2g46510basic helix-loop-helix (bHLH) family protein BHLH
0.57At1g12610DRE-binding protein, putative / CRT/DRE-binding factor, putative ((DDF1)) AP2-EREBP
0.57At3g15210ethylene-responsive element-binding factor 4 (ERF4) ((ATERF4, RAP2.5)) AP2-EREBP
0.56At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.55At3g50060myb family transcription factor MYB
0.54At1g20823zinc finger (C3HC4-type RING finger) family protein C3H
0.53At4g31800WRKY family transcription factor ((WRKY18)) WRKY
0.53At3g52800zinc finger (AN1-like) family protein C2H2
0.52At1g32640basic helix-loop-helix (bHLH) protein (RAP-1) ((ATMYC2)) BHLH
0.51At5g67300myb family transcription factor MYB
0.50At2g45680TCP family transcription factor, putative TCP
0.50At5g62470myb family transcription factor (MYB96) ((MYB96)) MYB

link to other 304 cis elements in ATTED

similar seq.
←CCGTGTG→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CACACGG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CCGTGTG1.000.0770
AAACGCG0.820.07149
AACGCGT0.820.10127
ATACGCG0.810.0639
ACGCGTT0.810.1096
AACCGTG0.810.07113
CGCGTTT0.810.1193
AACGCGC0.810.0696
TTACGCG0.800.07194
TAACGCG0.800.0762