cis; ATACGCG


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of ATACGCG

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of ATACGCG.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.64At5g01380expressed protein Trihelix
0.62At5g24590turnip crinkle virus-interacting protein / TCV-interacting protein (TIP) ((TIP)) NAC
0.61At2g38250DNA-binding protein-related Trihelix
0.59At4g01250WRKY family transcription factor ((WRKY22)) WRKY
0.58At5g48655zinc finger (C3HC4-type RING finger) family protein C3H
0.57At1g22810AP2 domain-containing transcription factor, putative AP2-EREBP
0.56At5g49520WRKY family transcription factor ((WRKY48)) WRKY
0.55At1g28370ERF domain protein 11 (ERF11) AP2-EREBP
0.54At5g45710heat shock transcription factor family protein ((AT-HSFA4C)) HSF
0.53At3g62420bZIP transcription factor family protein bZIP
0.53At3g15210ethylene-responsive element-binding factor 4 (ERF4) ((ATERF4, RAP2.5)) AP2-EREBP
0.52At3g23250myb family transcription factor (MYB15) MYB
0.52At3g10800bZIP transcription factor family protein bZIP
0.52At4g33940zinc finger (C3HC4-type RING finger) family protein C3H
0.51At1g80840WRKY family transcription factor ((WRKY40)) WRKY

link to other 304 cis elements in ATTED

similar seq.
ATACGCG
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CGCGTAT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
ATACGCG1.000.0639
CGCGTTT0.900.1193
ACCGCGT0.890.1098
AACCGCG0.890.0985
ACGCGTA0.880.1074
CCGCGTT0.880.1017
AACGCGT0.880.10127
TACGCGG0.870.0653
GCGTATG0.870.0653
ACGCGTT0.860.1096