cis; TACGCGC

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of TACGCGC

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of TACGCGC.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.63At4g33940zinc finger (C3HC4-type RING finger) family protein C3H
0.63At3g10800bZIP transcription factor family protein bZIP
0.62At5g24590turnip crinkle virus-interacting protein / TCV-interacting protein (TIP) ((TIP)) NAC
0.62At3g19580zinc finger (C2H2 type) protein 2 (AZF2) ((AZF2)) C2H2
0.62At5g45710heat shock transcription factor family protein ((AT-HSFA4C)) HSF
0.61At3g52800zinc finger (AN1-like) family protein C2H2
0.61At3g62420bZIP transcription factor family protein bZIP
0.59At5g04340zinc finger (C2H2 type) family protein ((C2H2)) C2H2
0.58At3g49530no apical meristem (NAM) family protein NAC
0.58At5g67300myb family transcription factor MYB
0.58At3g15210ethylene-responsive element-binding factor 4 (ERF4) ((ATERF4, RAP2.5)) AP2-EREBP
0.58At2g38250DNA-binding protein-related Trihelix
0.58At5g01380expressed protein Trihelix
0.57At4g27410no apical meristem (NAM) family protein (RD26) ((RD26)) NAC
0.57At5g49520WRKY family transcription factor ((WRKY48)) WRKY

link to other 304 cis elements in ATTED

similar seq.
←TACGCGC→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; GCGCGTA
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
TACGCGC1.000.0656
ATACGCG0.820.0639
CGCGTTT0.820.1193
AACGCGT0.780.10127
AACCGCG0.780.0985
CCGCGTT0.770.1017
AAACGCG0.760.07149
ACCGCGT0.760.1098
ACGCGTA0.750.1074
ACGCGTT0.750.1096