cis; TCACTCC


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
 YACT   CACTFTPPCA1 [ref]

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of TCACTCC

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of TCACTCC.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.52At3g22780CXC domain protein (TSO1) ((TSO1)) CPP
0.50At1g12860basic helix-loop-helix (bHLH) family protein / F-box family protein BHLH
-0.49At3g02340zinc finger (C3HC4-type RING finger) family protein C3H
0.47At1g14410DNA-binding protein-related WHIRLY
-0.46At3g04060no apical meristem (NAM) family protein NAC
0.46At2g24630glycosyl transferase family 2 protein ((ATCSLC08)) REM
-0.46At4g27470zinc finger (C3HC4-type RING finger) family protein C3H
0.45At4g21750L1 specific homeobox gene (ML1) / ovule-specific homeobox protein A20 ((ATML1)) Homeobox
-0.45At5g38895zinc finger (C3HC4-type RING finger) family protein C3H
0.45At4g04890homeobox-leucine zipper protein protodermal factor 2 (PDF2) ((PDF2)) Homeobox
0.43At1g72050zinc finger (C2H2 type) family protein C2H2
0.43At2g45190axial regulator YABBY1 (YABBY1) / abnormal floral organs protein (AFO) / filamentous flower protein (FIL) ((AFO, FIL, YAB1)) C2C2-YABBY
0.43At5g60690homeodomain-leucine zipper protein Revoluta (REV) / fascicular fiberless 1 (IFL1) ((IFL1, REV)) Homeobox
0.42At2g01760two-component responsive regulator family protein / response regulator family protein ((ARR14)) ARR-B
-0.42At4g18880heat shock transcription factor 21 (HSF21) ((AT-HSFA4A)) HSF

link to other 304 cis elements in ATTED

similar seq.
TCACTCC
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; GGAGTGA
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
TCACTCC1.000.073