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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106396637   pentatricopeptide repeat-containing protein At2g29760, chloroplastic 
 ath-u.5   OTP81   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100795459   pentatricopeptide repeat-containing protein At2g29760, chloroplastic 
 vvi-u.5   100263911   pentatricopeptide repeat-containing protein At2g29760, chloroplastic 
 vvi-u.5   100262644   pentatricopeptide repeat-containing protein At2g29760, chloroplastic 
 ppo-u.5   18107640   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 ppo-u.5   7468568   pentatricopeptide repeat-containing protein At2g29760, chloroplastic 
 sly-u.5   101257180   pentatricopeptide repeat-containing protein At2g29760, chloroplastic 

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Top 50 coexpressed genes to 106396637 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106396637 (bna-r.1 coexpression data)

CoexMap"106396637"


bnaLOC106396637 | Entrez gene ID : 106396637    
Species bna ath gma vvi ppo sly bdi mtr bra hvu cit sbi ghi osa sot nta cre tae zma
Paralog 1 1 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (870 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (3493 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013692541.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 2,  cyto 1,  mito 1,  cysk 1  (predict for XP_013692541.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_013692541.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106396637
ath-u.5
for
OTP81
gma-u.5
for
100795459
vvi-u.5
for
100263911
vvi-u.5
for
100262644
ppo-u.5
for
18107640
ppo-u.5
for
7468568
sly-u.5
for
101257180


Ortholog ID: 11253
Species bna bna bra ath ghi ghi cit cit gma vvi ppo ppo sly sot nta nta tae bdi
Symbol LOC106434117 LOC125594735 LOC103868004 OTP81 LOC107906613 LOC107959183 LOC102623637 LOC102631065 LOC100795459 LOC100263911 LOC7468568 LOC18107640 LOC101257180 LOC102587393 LOC107794088 LOC107787434 LOC123045769 LOC100839670
Function* pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like pentatricopeptide repeat-containing protein At2g29760, chloroplastic Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At5g48910
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03060 Protein export 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106434117 125594735 103868004 817526 107906613 107959183 102623637 102631065 100795459 100263911 7468568 18107640 101257180 102587393 107794088 107787434 123045769 100839670
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