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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9  AT3G16610  pentatricopeptide (PPR) repeat-containing protein 
 ath-m.4.bio  AT3G16610  pentatricopeptide (PPR) repeat-containing protein 
 ath-m.4.hor  AT3G16610  pentatricopeptide (PPR) repeat-containing protein 
 ath-m.4.lig  AT3G16610  pentatricopeptide (PPR) repeat-containing protein 
 ath-m.4.str  AT3G16610  pentatricopeptide (PPR) repeat-containing protein 
 ath-m.4.tis  AT3G16610  pentatricopeptide (PPR) repeat-containing protein 
 gma-u.5  100780518  DEAD-box ATP-dependent RNA helicase 22 
 vvi-u.5  100251168  pentatricopeptide repeat-containing protein At3g16610 
 ppo-u.5  18111160  pentatricopeptide repeat-containing protein At3g16610 
 mtr-u.5  11406042  pentatricopeptide repeat-containing protein At3g16610 
 osa-u.5  4327814  pentatricopeptide repeat-containing protein At3g16610 

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Top 50 coexpressed genes to AT3G16610 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G16610 (ath-m.9 coexpression data)

CoexMap"820912"


athAT3G16610 | Entrez gene ID : 820912
Species ath gma vvi ppo mtr osa hvu sot tae nta bra cit ghi zma bna bdi sly sbi cre
Paralog 6 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
Protein NP_188283.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 1,  cyto 1,  E.R. 1,  cyto_mito 1,  mito_plas 1,  cyto_E.R. 1  (predict for NP_188283.1)
Subcellular
localization
TargetP
mito 7  (predict for NP_188283.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G16610

.

ath-m.4.bio
for
AT3G16610

.

ath-m.4.hor
for
AT3G16610

.

ath-m.4.lig
for
AT3G16610

.

ath-m.4.str
for
AT3G16610

.

ath-m.4.tis
for
AT3G16610

.

gma-u.5
for
100780518

.

vvi-u.5
for
100251168

.

ppo-u.5
for
18111160

.

mtr-u.5
for
11406042

.

osa-u.5
for
4327814

.


Ortholog ID: 12430
Species gma osa bra vvi ppo mtr hvu sbi sot bdi nta nta
Symbol LOC100780518 LOC4327814 LOC103839938 LOC100251168 LOC18111160 LOC11406042 LOC123429313 LOC8057214 LOC102590843 LOC100823257 LOC107825516 LOC107762089
Function* DEAD-box ATP-dependent RNA helicase 22 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610-like pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At3g16610-like pentatricopeptide repeat-containing protein At3g16610-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100780518 4327814 103839938 100251168 18111160 11406042 123429313 8057214 102590843 100823257 107825516 107762089
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