Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4   AT5G12410   THUMP domain-containing protein 
 ath-r.6   AT5G12410   THUMP domain-containing protein 
 ath-m.9   AT5G12410   THUMP domain-containing protein 
 ath-m.4.notissue   AT5G12410   THUMP domain-containing protein 
 ath-m.4.tis   AT5G12410   THUMP domain-containing protein 
 ath-m.4.str   AT5G12410   THUMP domain-containing protein 
 ath-m.4.hor   AT5G12410   THUMP domain-containing protein 
 ath-m.4.bio   AT5G12410   THUMP domain-containing protein 
 ath-m.4.lig   AT5G12410   THUMP domain-containing protein 
 ath-e.1   AT5G12410   THUMP domain-containing protein 
 gma-u.4   100812892   uncharacterized LOC100812892 
 gma-u.4   100776466   THUMP domain-containing protein 1 homolog 
 ppo-u.4   7467981   THUMP domain-containing protein 1 
 ppo-u.4   7467389   THUMP domain-containing protein 1 homolog 
 mtr-u.4   11436214   THUMP domain-containing protein 1 homolog 
 sly-u.4   101265890   THUMP domain-containing protein 1 homolog 
 osa-u.4   4350746   THUMP domain-containing protein 1 homolog 

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Top 50 coexpressed genes to AT5G12410 (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath3008   Ribosome biogenesis in eukaryotes  4 87 4.16
 ath3010   Ribosome  4 334 2.00
 ath1232   Nucleotide metabolism  1 84 -
 ath230   Purine metabolism  1 87 -
 ath970   Aminoacyl-tRNA biosynthesis  2 199 -

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ath:AT5G12410 (THUMP domain-containing protein) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-u.4
for
AT5G12410
ath-r.6
for
AT5G12410
ath-m.9
for
AT5G12410
ath-m.4.notissue
for
AT5G12410
ath-m.4.tis
for
AT5G12410
ath-m.4.str
for
AT5G12410
ath-m.4.hor
for
AT5G12410
ath-m.4.bio
for
AT5G12410
ath-m.4.lig
for
AT5G12410
ath-e.1
for
AT5G12410
gma-u.4
for
100812892
gma-u.4
for
100776466
ppo-u.4
for
7467981
ppo-u.4
for
7467389
mtr-u.4
for
11436214
sly-u.4
for
101265890
osa-u.4
for
4350746
1 AT3G15970 NUP50 (Nucleoporin 50 kDa) protein 820841 At3g15970 8.7 8.4
 6.6
 235.2
 2.1
 1.6
 2.6
 1.8
 2.3
 7.0
 2.9
2.5
 2.4
0.5
 3.2
1.1
 2.9
1.7
 3.6
 4.3
1.7
 1.4
2 IMB1 Transcription factor GTE6 818055 At2g34900 8.4 9.4
 5.1
 71.7
 3.6
 3.3
 1.8
 2.3
 0.6
 5.8
 2.2
1.7
 2.9
1.3
 1.1
1.0
 2.5
1.7
 4.2
1.7
 2.2
1.8
 -0.2
3 DDL SMAD/FHA domain-containing protein 821601 At3g20550 8.2 6.8
 7.4
 1361.8
 1.9
 2.1
 1.9
 1.1
 0.7
 5.5
 3.1
1.9
 3.5
1.3
 0.6
-0.3
 1.3
1.2
 3.8
 2.5
 1.3
4 AT4G08310 DNA ligase 826385 At4g08310 7.5 8.0
 4.9
 413.3
 1.8
 0.8
 0.7
 2.8
 1.1
 7.0
 1.4
0.7
 3.0
2.6
 2.3
0.6
 1.2
0.5
 3.7
 4.6
 3.9
5 AT2G20060 Ribosomal protein L4/L1 family 816525 At2g20060 7.4 7.4
 5.4
 23.6
 4.7
 2.6
 3.1
 3.6
 2.0
 3.6
 2.6
2.2
 2.2
1.9
 -0.5
 0.1
 0.7
 0.9
 4.2
6 AT5G06360 Ribosomal protein S8e family protein 830524 At5g06360 7.2 6.6
 5.9
 114.8
 2.9
 2.6
 1.8
 3.2
 1.6
 3.8
 3.1
2.2
 1.5
1.5
 1.8
1.2
 3.1
2.2
 3.2
 3.1
 1.7
7 AT5G08420 RNA-binding KH domain-containing protein 830741 At5g08420 6.8 5.4
 6.3
 10.8
 1.5
 2.6
 2.2
 2.9
 1.5
 4.4
 1.4
1.4
 1.5
1.0
 3.3
 3.6
 5.9
 3.6
 2.2
8 AT5G04600 RNA-binding (RRM/RBD/RNP motifs) family protein 830337 At5g04600 6.8 6.7
 5.0
 186.6
 4.1
 3.4
 1.8
 1.7
 3.2
 4.7
 3.7
3.1
 3.0
2.0
 0.9
 1.6
 4.1
4.0
 4.7
1.9
 2.1
9 AT5G37350 Serine/threonine-protein kinase Rio1 833709 At5g37350 6.6 6.8






3.9
 4.6
3.2
 3.4
3.4
 1.2
 0.8
 5.7
 3.1
 3.0
10 AT1G11240 ribosomal RNA-processing protein 837665 At1g11240 6.6 6.4
 5.0
 117.8
 2.7
 2.4
 3.4
 2.2
 2.9
 3.5
 2.6
1.7
 2.9
1.8
 3.3
0.6
 4.1
2.0
 3.6
 2.0
 3.8
11 EMB2777 Sas10/U3 ribonucleoprotein (Utp) family protein 818967 At2g43650 6.5 7.6
 3.7
 446.2
 1.8
 2.3
 1.4
 1.7
 0.9
 7.0
 2.5
1.7
 4.1
3.4
 1.4
 1.3
 6.6
 4.1
3.8
 5.7
12 AT2G28450 zinc finger (CCCH-type) family protein 817393 At2g28450 6.5 6.0
 5.3
 195.5
 1.8
 2.7
 1.3
 2.4
 1.2
 3.6
 2.1
0.9
 0.8
0.8
 2.0
 1.1
 2.1
 3.7
 3.2
13 MAP2B methionine aminopeptidase 2B 825169 At3g59990 6.5 5.5
 5.7
 17.3
 1.7
 4.1
 1.1
 3.5
 1.9
 3.1
 4.0
3.0
 5.0
4.7
 0.3
0.2
 0.8
-0.8
 4.8
3.9
 3.9
 1.5
0.8
14 NFD1 Ribosomal protein L21 829217 At4g30930 6.4 7.4
 3.7
 51.0
 2.7
 2.5
 2.2
 3.7
 1.6
 5.2
 4.2
3.4
 5.2
2.5
 1.5
 2.5
 2.4
 2.4
 4.0
15 U2A' U2 small nuclear ribonucleoprotein A 837505 At1g09760 6.4 5.7
 5.3
 56.8
 3.0
 2.3
 1.8
 4.0
 1.9
 0.9
 0.7
-0.4
 1.7
-0.1
 1.5
 3.5
 2.0
 2.5
 3.4
16 AT4G32610 copper ion binding protein 829396 At4g32610 6.3 6.7






5.4
 2.1
2.0
 2.1
0.8
 2.1
1.7
 1.8
1.6
 3.1
0.7
 3.8
3.5
 0.8
17 HMG high mobility group 822505 At3g28730 6.2 5.0
 5.7
 119.0
 1.7
 2.2
 1.6
 2.8
 0.4
 3.4
 3.2
2.7
 2.3
2.3
 0.9
-0.0
 1.1
-0.2
 3.7
1.8
 1.5
 1.9
0.6
18 TRM10 tRNA (guanine(9)-N1)-methyltransferase-like protein 834819 At5g47680 6.2 5.3
 5.4
 104.8
 2.0
 3.0
 2.1
 2.4
 2.2
 5.8
 2.2
1.5
 2.9
1.3
 1.2
1.2
 2.3
1.2
 2.9
 3.0
 4.9
19 LIF2 RNA-binding (RRM/RBD/RNP motifs) family protein 827998 At4g00830 6.1 7.6
 2.9
 111.8
 2.8
 2.8
 0.9
 2.0
 0.5
 6.3
 2.4
2.0
 3.2
2.8
 1.3
0.4
 1.0
0.4
 5.6
3.9
 2.1
0.6
 1.7
1.4
20 AT4G02230 Ribosomal protein L19e family protein 828099 At4g02230 6.0 5.7
 4.7
 41.0
 1.7
 4.8
 2.6
 3.2
 1.0
 4.4
 2.8
2.7
 4.6
4.4
 1.6
-0.1
 1.2
1.1
 3.7
3.6
 3.6
2.1
 4.3
3.7
21 NAP1;1 nucleosome assembly protein1;1 828717 At4g26110 6.0 6.3
 4.0
 167.8
 1.7
 2.5
 2.0
 2.4
 0.9
 4.9
 2.9
2.4
 5.3
4.2
 1.6
-1.2
 1.0
-0.3
 3.7
0.3
 3.3
2.1
 5.7
2.0
22 AT4G00238 DNA-binding storekeeper protein-related transcriptional regulator 825892 At4g00238 5.9 6.3






2.4
 2.3
1.9
 1.9
1.8
 4.0
2.3
 3.6
3.6
 3.9
2.6
 5.2
23 AT1G15810 S15/NS1, RNA-binding protein 838150 At1g15810 5.9 5.1
 5.2
 39.2
 1.9
 1.9
 2.9
 5.2
 2.2
 4.3
 0.5
 2.9
 1.3
 2.7
 2.0
 2.6
 4.6
24 AT2G33840 Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial 817952 At2g33840 5.9 5.8






3.2
 1.6
1.4
 5.0
4.8
 -0.3
 -0.4
 3.2
2.7
 3.3
 5.8
4.8
25 PMD1 Tropomyosin-like protein 825053 At3g58840 5.9 5.5
 4.6
 271.7
 1.6
 2.8
 3.1
 0.8
 1.2
 5.9
 2.7
-0.1
 3.4
0.6
 0.9
0.6
 1.7
1.3
 1.1
 1.1
0.5
26 AT5G14440 Surfeit locus protein 2 (SURF2) 831295 At5g14440 5.8 5.6
 4.5
 362.8
 1.8
 1.9
 2.1
 2.1
 3.1
 5.9
 5.4
3.4
 2.8
2.6
 1.7
 1.8
 2.3
 1.0
27 AT1G07830 ribosomal protein L29 family protein 837298 At1g07830 5.8 5.0
 5.0
 5.7
 4.0
 4.8
 2.7
 3.7
 0.7
 1.5
 0.3
-0.0
 2.1
1.6
 1.1
0.6
 1.8
0.5
 1.2
 1.6
 4.2
28 AT2G19080 metaxin-like protein 816425 At2g19080 5.8 5.9
 4.2
 119.4
 2.9
 2.5
 2.0
 3.5
 2.3
 1.6
 1.5
0.9
 2.2
1.8
 0.7
 1.4
 3.3
-0.4
 0.4
 3.7
29 La1 La protein 1 829408 At4g32720 5.7 5.4
 4.5
 97.8
 3.1
 2.7
 2.5
 2.5
 1.6
 5.0
 3.8
2.8
 2.2
1.6
 1.0
0.2
 1.6
0.9
 4.5
 3.9
 5.3
4.1
30 RDM4 RNA-directed DNA methylation 4 817578 At2g30280 5.7 5.8
 4.1
 354.2
 1.6
 1.9
 0.6
 1.2
 1.1
 3.7
 2.1
 0.9
 1.2
 0.8
 3.9
3.2
 4.5
 1.7
1.0
31 AT3G51270 protein serine/threonine kinase 824290 At3g51270 5.7 6.2
 3.7
 176.1
 1.8
 2.3
 1.5
 2.6
 1.6
 6.0
 3.3
2.7
 2.9
2.1
 2.2
 3.3
 4.6
 1.4
 2.7
32 DECOY decoy 838024 At1g14620 5.7 5.2
 4.7
 12.7
 2.0
 4.0
 3.2
 3.6
 0.9
 2.5
 3.4
2.4
 6.1
3.3
 1.4
 1.9
 2.1
0.2
 1.0
-0.1
 1.8
33 AT3G56510 RNA-binding (RRM/RBD/RNP motifs) family protein 824818 At3g56510 5.7 5.5
 4.3
 63.2
 1.5
 3.2
 1.7
 3.1
 1.2
 3.9
 1.7
0.6
 2.4
0.6

3.3
 1.8
1.6
 3.7
34 AT1G74060 Ribosomal protein L6 family protein 843746 At1g74060 5.7 5.7






2.1
 2.9
2.8
 4.2
4.1
 0.1
-0.2
 1.6
0.7
 3.3
3.0
 2.3
1.6
 4.3
2.6
35 AtNug2 GTP-binding family protein 841731 At1g52980 5.6 5.7
 4.0
 207.8
 2.6
 2.3
 1.7
 3.1
 1.6
 5.1
 3.4
3.1
 2.1
1.4
 2.2
 2.9
 2.1
1.8
 5.6
 1.6
36 AT4G08580 microfibrillar-associated protein-like protein 826419 At4g08580 5.6 6.1






4.5
 1.7
1.4
 2.2
1.9
 1.2
0.7
 1.5
0.2
 3.6
 4.4
 1.0
37 AT1G55890 Tetratricopeptide repeat (TPR)-like superfamily protein 842039 At1g55890 5.6 4.6
 5.1
 174.5
 3.4
 2.2
 1.9
 3.1
 1.0
 2.7
 0.8
0.7
 0.5
0.2
 1.2
1.1
 1.7
1.6
 0.7
-0.3
 1.9
1.9
 3.8
-0.7
38 AT5G14520 pescadillo-like protein 831303 At5g14520 5.6 4.5
 5.1
 500.9
 2.9
 1.7
 1.7
 2.1
 2.2
 4.2
 2.8
2.0
 2.1
1.4
 0.9
0.7
 1.9
1.8
 4.8
 2.9
 3.5
39 AT2G37230 Tetratricopeptide repeat (TPR)-like superfamily protein 818300 At2g37230 5.6 5.8






4.3
 1.7
-0.0
 2.9
1.7
 -0.5
 1.4
 1.7
 1.5
 1.4
40 HD2B histone deacetylase 2B 832328 At5g22650 5.5 4.5
 5.0
 267.0
 3.5
 1.8
 2.2
 2.3
 1.7
 6.1
 2.7
2.6
 3.4
3.4
 1.1
1.0
 2.1
1.8
 3.1
2.5
 3.9
3.1
 3.9
41 RANBP1 RAN binding protein 1 835973 At5g58590 5.5 5.7
 3.8
 1066.7
 2.1
 1.2
 1.8
 1.3
 0.1
 5.0
 0.5
-0.0
 2.3
2.3
 2.0
0.7
 3.5
0.6
 1.5
1.2
 2.1
1.0
 1.8
1.1
42 ARP4 actin-related protein 4 838425 At1g18450 5.5 4.0
 5.5
 248.9
 3.1
 3.2
 1.0
 1.4
 -0.0
 1.1
 1.9
1.4
 1.3
1.0
 1.4
1.4
 2.3
0.5
 3.2
2.6
 1.8
 2.5
43 AT1G24510 TCP-1/cpn60 chaperonin family protein 839066 At1g24510 5.5 6.0
 3.5
 623.2
 2.1
 1.2
 1.8
 3.5
 1.3
 4.9
 1.7
1.0
 3.6
2.6
 0.5
-0.4
 1.9
0.7
 2.4
 1.5
 4.8
44 AT3G57000 nucleolar essential protein-like protein 824867 At3g57000 5.5 6.7
 2.8
 82.0
 2.6
 2.4
 2.7
 2.7
 1.6
 5.8
 4.3
1.4
 2.7
1.1
 1.8
0.5
 1.9
1.3
 4.3
4.0
 2.7
 5.0
45 AT3G15590 Tetratricopeptide repeat (TPR)-like superfamily protein 820799 At3g15590 5.4 5.1
 4.3
 94.7
 2.6
 4.2
 2.6
 3.2
 3.9
 3.4
 1.4
1.4
 2.5
2.2
 0.7
0.6
 2.2
1.1
 2.1
1.8
 3.1
 4.7
4.2
46 NFD5 pentatricopeptide (PPR) repeat-containing protein 838538 At1g19520 5.4 4.7
 4.8
 1881.0
 3.0
 2.2
 2.5
 3.1
 1.2
 5.5
 1.4
-0.2
 3.7
2.7
 -1.0
 0.2
 0.7
 1.2
 4.3
47 AT1G16350 Aldolase-type TIM barrel family protein 838204 At1g16350 5.4 4.7
 4.7
 407.9
 1.6
 2.7
 2.4
 1.1
 0.3
 5.5
 2.1
1.6
 2.2
2.1
 1.0
-0.3
 1.2
0.5
 4.9
 2.2
 2.3
48 AT1G80620 S15/NS1, RNA-binding protein 844401 At1g80620 5.4 5.6
 3.8
 501.0
 3.0
 1.8
 3.1
 1.7
 4.2
 5.9
 0.5
 2.9
 1.3
 2.7
 2.0
 2.6
 4.6
49 TWN2 valyl-tRNA synthetase / valine-tRNA ligase (VALRS) 838023 At1g14610 5.4 5.1
 4.3
 635.7
 2.1
 1.1
 1.3
 2.5
 2.2
 4.4
 1.8
 2.0
 0.6
0.5
 1.7
1.0
 5.0
 3.7
 3.9
2.0
50 AT4G35850 Pentatricopeptide repeat (PPR) superfamily protein 829739 At4g35850 5.4 5.2
 4.2
 113.6
 2.7
 2.7
 2.4
 2.4
 3.9
 3.9
 0.5
0.4
 1.7
1.4
 0.4
 1.5
 0.4
 0.2
 3.2
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