GO:0006397 mRNA processing

185 ath genes in this database.
368 gma genes in this database.
211 sly genes in this database.
212 osa genes in this database.
251 zma genes in this database.
329 bra genes in this database.
186 vvi genes in this database.
275 ppo genes in this database.
216 mtr genes in this database.
616 tae genes in this database.
272 hvu genes in this database.
513 ghi genes in this database.
684 bna genes in this database.
143 cre genes in this database.
222 sbi genes in this database.
205 sot genes in this database.
202 cit genes in this database.
225 bdi genes in this database.
391 nta genes in this database.

[QuickGO]

term: mRNA processing
goid: GO:0006397

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Shaded genes do not have GeneChip data. The output was limited up to 10000.
Species Symbol Gene
coexpression		 Locus
page 		Full name* Entrez Gene ID Evidence*
sot LOC102577454 putative arginine/serine-rich protein 102577454
sot LOC102577531 nuclear cap-binding protein CBP20 102577531
sot LOC102578155 probable pre-mRNA-splicing factor ATP-dependent RNA helicase 102578155
sot LOC102578259 serine/arginine-rich splicing factor 4 102578259
sot LOC102578553 protein CWC15 homolog 102578553
sot LOC102578763 small nuclear ribonucleoprotein SmD3b-like 102578763
sot LOC102579213 protein CLP1 homolog 102579213
sot LOC102579317 pentatricopeptide repeat-containing protein At2g15820, chloroplastic 102579317
sot LOC102579366 sm-like protein LSM5 102579366
sot LOC102579899 uncharacterized mitochondrial protein ymf11 102579899 IEA
sot LOC102579947 U1 snRNP-associated protein usp106-like 102579947
sot LOC102580192 splicing factor 3A subunit 3 102580192
sot LOC102580267 uncharacterized mitochondrial protein ymf11 102580267 IEA
sot LOC102580345 sm-like protein LSM7 102580345
sot LOC102580551 30-kDa cleavage and polyadenylation specificity factor 30-like 102580551
sot LOC102580566 mRNA cap guanine-N7 methyltransferase 1 102580566
sot LOC102580771 regulation of nuclear pre-mRNA domain-containing protein 1B 102580771
sot LOC102580976 E3 ubiquitin-protein ligase RBBP6-like 102580976 IEA
sot LOC102580993 U1 small nuclear ribonucleoprotein C-like 102580993
sot LOC102581250 pre-mRNA-splicing factor CWC25 homolog 102581250
sot LOC102581420 splicing factor 3B subunit 6-like protein 102581420
sot LOC102581701 coiled-coil domain-containing protein 130-like 102581701
sot LOC102581776 U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like 102581776
sot LOC102581895 protein PALE CRESS, chloroplastic 102581895
sot LOC102582177 probable small nuclear ribonucleoprotein G 102582177
sot LOC102582252 probable small nuclear ribonucleoprotein G 102582252
sot LOC102582303 cleavage stimulating factor 64-like 102582303
sot LOC102582464 DEAD-box ATP-dependent RNA helicase 35 102582464
sot LOC102582501 chloride conductance regulatory protein ICln 102582501
sot LOC102582626 heterogeneous nuclear ribonucleoprotein U-like protein 1 102582626
sot LOC102582676 cleavage and polyadenylation specificity factor subunit 3-I 102582676
sot LOC102582680 splicing factor 3B subunit 1 102582680
sot LOC102582785 uncharacterized LOC102582785 102582785
sot LOC102582805 mRNA cap guanine-N7 methyltransferase 2 102582805
sot LOC102582930 polyadenylation and cleavage factor homolog 4 102582930
sot LOC102583033 PAX3- and PAX7-binding protein 1 102583033
sot LOC102583085 probable U6 snRNA-associated Sm-like protein LSm4-like 102583085
sot LOC102583224 cleavage stimulation factor subunit 50 102583224
sot LOC102583289 pro-resilin 102583289
sot LOC102583474 protein pleiotropic regulatory locus 1-like 102583474
sot LOC102583587 cleavage stimulating factor 64-like 102583587
sot LOC102583780 uncharacterized LOC102583780 102583780
sot LOC102584072 pre-mRNA cleavage factor Im 25 kDa subunit 2-like 102584072
sot LOC102584094 splicing factor U2af large subunit B-like 102584094 IEA
sot LOC102584286 FIP1[III]-like protein 102584286 IEA
sot LOC102584323 uncharacterized LOC102584323 102584323
sot LOC102584382 protein CASC3 102584382 IEA
sot LOC102584487 lariat debranching enzyme 102584487
sot LOC102584531 splicing factor 3A subunit 2 102584531
sot LOC102584606 splicing factor U2af large subunit B 102584606 IEA
sot LOC102584702 mRNA-capping enzyme-like 102584702
sot LOC102585073 pre-mRNA-processing factor 39 102585073
sot LOC102585125 splicing factor U2af large subunit A 102585125 IEA
sot LOC102585139 pre-mRNA-splicing factor ISY1 homolog 102585139
sot LOC102585140 small nuclear ribonucleoprotein-associated protein B'-like 102585140
sot LOC102585264 serine/threonine-protein kinase SRPK 102585264
sot LOC102585278 regulation of nuclear pre-mRNA domain-containing protein 1B-like 102585278
sot LOC102585283 uncharacterized LOC102585283 102585283
sot LOC102585703 pre-mRNA-processing factor 17-like 102585703
sot LOC102585876 small nuclear ribonucleoprotein SmD3b-like 102585876
sot LOC102586065 pre-mRNA-splicing factor SLU7-like 102586065
sot LOC102586113 pre-mRNA-processing-splicing factor 8-like 102586113
sot LOC102586174 pre-mRNA-processing protein 40A-like 102586174
sot LOC102586216 serine-threonine kinase receptor-associated protein-like 102586216
sot LOC102586499 thioredoxin-like protein YLS8 102586499
sot LOC102586865 protein high chlorophyll fluorescent 107 102586865 IEA
sot LOC102587171 PHD finger-like domain-containing protein 5B 102587171
sot LOC102587492 pre-mRNA-splicing factor CWC22 homolog 102587492
sot LOC102587557 uncharacterized LOC102587557 102587557
sot LOC102587736 U4/U6 small nuclear ribonucleoprotein Prp31 102587736
sot LOC102588306 protein BUD31 homolog 2 102588306
sot LOC102588530 sm-like protein LSM36B 102588530
sot LOC102588627 116 kDa U5 small nuclear ribonucleoprotein component 102588627
sot LOC102588653 pre-mRNA-processing protein 40A-like 102588653
sot LOC102588693 pre-mRNA-splicing factor 18 102588693
sot LOC102588730 SRSF protein kinase 1-like 102588730
sot LOC102588813 zinc finger CCCH domain-containing protein 64 102588813
sot LOC102588843 sm-like protein LSM8 102588843
sot LOC102589483 protein pleiotropic regulatory locus 1 102589483
sot LOC102589616 cell division cycle 5-like protein 102589616
sot LOC102589799 coiled-coil domain-containing protein 94 102589799
sot LOC102590021 uncharacterized LOC102590021 102590021
sot LOC102590044 SRSF protein kinase 1-like 102590044
sot LOC102590383 small nuclear ribonucleoprotein SmD3b-like 102590383
sot LOC102590431 SNW/SKI-interacting protein-like 102590431
sot LOC102590524 splicing factor U2af small subunit B-like 102590524
sot LOC102590563 probable pre-mRNA-splicing factor ATP-dependent RNA helicase 102590563
sot LOC102590710 uncharacterized LOC102590710 102590710
sot LOC102591518 probable splicing factor 3A subunit 1 102591518
sot LOC102591572 30-kDa cleavage and polyadenylation specificity factor 30-like 102591572
sot LOC102591714 small nuclear ribonucleoprotein-associated proteins B and B'-like 102591714
sot LOC102591804 WD repeat domain-containing protein 83 102591804
sot LOC102592190 pre-mRNA-processing factor 19 homolog 1-like 102592190
sot LOC102592509 THO complex subunit 7A-like 102592509 IEA
sot LOC102592972 zinc finger CCCH domain-containing protein 25 102592972
sot LOC102593275 protein MOS2 102593275
sot LOC102593421 pre-mRNA cleavage factor Im 25 kDa subunit 1 102593421
sot LOC102593629 polyadenylation and cleavage factor homolog 4 102593629
sot LOC102593692 splicing factor, suppressor of white-apricot homolog 102593692
sot LOC102593694 small nuclear ribonucleoprotein Sm D1-like 102593694
sot LOC102593956 cleavage stimulating factor 64 102593956
sot LOC102594042 crooked neck-like protein 1 102594042
sot LOC102594420 probable splicing factor 3A subunit 1 102594420
sot LOC102594664 pre-mRNA-splicing factor CWC22 homolog 102594664
sot LOC102594936 thioredoxin-like protein YLS8 102594936
sot LOC102594970 uncharacterized LOC102594970 102594970
sot LOC102595293 FIP1[V]-like protein 102595293 IEA
sot LOC102595543 protein BUD31 homolog 1-like 102595543
sot LOC102596022 U4/U6 small nuclear ribonucleoprotein Prp3 102596022
sot LOC102596093 SRSF protein kinase 3-like 102596093
sot LOC102596277 uncharacterized protein At4g14342 102596277
sot LOC102596412 pre-mRNA-splicing factor SYF1 102596412
sot LOC102596525 U4/U6 small nuclear ribonucleoprotein Prp3-like 102596525
sot LOC102596544 small nuclear ribonucleoprotein E-like 102596544
sot LOC102596690 splicing factor U2af small subunit B-like 102596690
sot LOC102596855 pre-mRNA-splicing factor 18-like 102596855
sot LOC102597053 BUD13 homolog 102597053
sot LOC102597062 SART-1 family protein DOT2-like 102597062
sot LOC102597201 uncharacterized LOC102597201 102597201 IEA
sot LOC102597325 pre-mRNA cleavage factor Im 25 kDa subunit 2 102597325
sot LOC102597458 luc7-like protein 3 102597458
sot LOC102597507 pre-mRNA-splicing factor 18-like 102597507
sot LOC102597690 U2 small nuclear ribonucleoprotein A'-like 102597690
sot LOC102597700 serine/threonine-protein kinase prpf4B 102597700
sot LOC102597827 flowering time control protein FY 102597827
sot LOC102597856 uncharacterized protein At4g14342-like 102597856
sot LOC102597966 sm-like protein LSM3A 102597966
sot LOC102597990 protein AAR2 homolog 102597990
sot LOC102597998 uncharacterized LOC102597998 102597998
sot LOC102598086 U4/U6 small nuclear ribonucleoprotein PRP4-like protein 102598086
sot LOC102598346 serrate RNA effector molecule 102598346 IEA
sot LOC102598649 uncharacterized LOC102598649 102598649
sot LOC102599029 G patch domain-containing protein TGH 102599029 IEA
sot LOC102599170 pre-mRNA-splicing factor SLU7-like 102599170
sot LOC102599306 protein STABILIZED1 102599306
sot LOC102599473 splicing factor U2af large subunit B-like 102599473 IEA
sot LOC102599556 SART-1 family protein DOT2 102599556
sot LOC102599679 U11/U12 small nuclear ribonucleoprotein 35 kDa protein 102599679
sot LOC102599903 intron-binding protein aquarius 102599903
sot LOC102600295 probable small nuclear ribonucleoprotein F 102600295
sot LOC102600325 serine/threonine-protein kinase prpf4B-like 102600325
sot LOC102600386 mRNA-capping enzyme-like 102600386
sot LOC102600661 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like 102600661 IEA
sot LOC102600680 mRNA-capping enzyme-like 102600680
sot LOC102600710 pre-mRNA-processing factor 19 102600710
sot LOC102600833 small nuclear ribonucleoprotein E-like 102600833
sot LOC102600939 sm-like protein LSM2 102600939
sot LOC102601072 suppressor of mec-8 and unc-52 protein homolog 1 102601072
sot LOC102601097 SRSF protein kinase 1 102601097
sot LOC102601306 sm-like protein LSM2 102601306
sot LOC102601512 septin and tuftelin-interacting protein 1 homolog 1 102601512
sot LOC102601682 protein CASC3 102601682 IEA
sot LOC102601744 DEAD-box ATP-dependent RNA helicase 35-like 102601744
sot LOC102601798 zinc finger matrin-type protein 2 102601798
sot LOC102601870 cactin 102601870
sot LOC102601882 U1 small nuclear ribonucleoprotein 70 kDa 102601882
sot LOC102601887 serine/threonine-protein kinase SRPK-like 102601887
sot LOC102602117 THO complex subunit 7A-like 102602117 IEA
sot LOC102602180 U11/U12 small nuclear ribonucleoprotein 25 kDa protein 102602180
sot LOC102602235 protein crooked neck 102602235
sot LOC102602288 SNW/SKI-interacting protein 102602288
sot LOC102602403 cleavage and polyadenylation specificity factor subunit 2 102602403
sot LOC102602549 U4/U6 small nuclear ribonucleoprotein Prp31-like 102602549
sot LOC102602590 mRNA cap guanine-N7 methyltransferase 1-like 102602590
sot LOC102602688 uncharacterized LOC102602688 102602688
sot LOC102602792 pre-mRNA-splicing factor CWC22 homolog 102602792
sot LOC102602868 cleavage stimulation factor subunit 77 102602868
sot LOC102602989 U11/U12 small nuclear ribonucleoprotein 65 kDa protein 102602989
sot LOC102603035 uncharacterized protein C9orf78 102603035
sot LOC102603413 DNA-damage-repair/toleration protein DRT111, chloroplastic 102603413
sot LOC102603469 coilin-like 102603469
sot LOC102603602 U4/U6.U5 tri-snRNP-associated protein 2-like 102603602 IEA
sot LOC102603634 thioredoxin-like protein 4B 102603634
sot LOC102603652 uncharacterized LOC102603652 102603652
sot LOC102603741 polypyrimidine tract-binding protein homolog 3-like 102603741 IEA
sot LOC102603802 U11/U12 small nuclear ribonucleoprotein 31 kDa protein 102603802
sot LOC102603870 HIV Tat-specific factor 1 homolog 102603870
sot LOC102604200 RNA-binding protein 39 102604200 IEA
sot LOC102604500 protein CWC15 homolog 102604500
sot LOC102604502 WW domain-binding protein 4 102604502
sot LOC102604548 coilin 102604548
sot LOC102604573 crooked neck-like protein 1 102604573
sot LOC102604667 serine/threonine-protein kinase/endoribonuclease IRE1a-like 102604667 IEA
sot LOC102604683 serine/threonine-protein kinase/endoribonuclease IRE1b-like 102604683 IEA
sot LOC102604708 cold-inducible RNA-binding protein 102604708
sot LOC102604786 RNA-binding protein 5-A 102604786
sot LOC102605163 pre-mRNA-splicing factor cwc22-like 102605163
sot LOC102605266 U1 small nuclear ribonucleoprotein C-like 102605266
sot LOC102605698 pre-mRNA-splicing factor SPF27 homolog 102605698 IEA
sot LOC102605870 zinc finger CCCH domain-containing protein 5 102605870
sot LOC102605884 uncharacterized protein At4g14342 102605884
sot LOC102606042 THO complex subunit 2 102606042 IEA
sot LOC102606056 probable U6 snRNA-associated Sm-like protein LSm4 102606056
sot LOC102606204 small nuclear ribonucleoprotein E-like 102606204
sot LOC102606319 uncharacterized LOC102606319 102606319
sot LOC107058193 pre-mRNA-splicing factor 18-like 107058193
sot LOC107059135 splicing factor 3B subunit 1-like 107059135
sot LOC107059242 splicing factor U2af small subunit A-like 107059242
sot LOC107059246 pre-mRNA-splicing factor cwc22-like 107059246
sot LOC107059794 splicing factor 3B subunit 1-like 107059794
sot LOC107061028 sm-like protein LSM4 107061028
sot LOC107061741 E3 ubiquitin-protein ligase RBBP6-like 107061741 IEA
sot LOC107062933 zinc finger CCCH domain-containing protein 25-like 107062933
sot LOC107063078 uncharacterized RING finger protein P8B7.15c-like 107063078 IEA
sot LOC107063079 uncharacterized RING finger protein P8B7.15c-like 107063079 IEA


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