GO:0006397 mRNA processing

185 ath genes in this database.
368 gma genes in this database.
211 sly genes in this database.
212 osa genes in this database.
251 zma genes in this database.
329 bra genes in this database.
186 vvi genes in this database.
275 ppo genes in this database.
216 mtr genes in this database.
616 tae genes in this database.
272 hvu genes in this database.
513 ghi genes in this database.
684 bna genes in this database.
143 cre genes in this database.
222 sbi genes in this database.
205 sot genes in this database.
202 cit genes in this database.
225 bdi genes in this database.
391 nta genes in this database.

[QuickGO]

term: mRNA processing
goid: GO:0006397

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Shaded genes do not have GeneChip data. The output was limited up to 10000.
Species Symbol Gene
coexpression		 Locus
page 		Full name* Entrez Gene ID Evidence*
bdi LOC100820960 splicing factor U2af large subunit B 100820960 IEA
bdi LOC100821324 small nuclear ribonucleoprotein SmD3b 100821324
bdi LOC100821343 splicing factor U2af large subunit A 100821343 IEA
bdi LOC100821596 probable U6 snRNA-associated Sm-like protein LSm4 100821596
bdi LOC100821747 splicing factor U2af large subunit B 100821747 IEA
bdi LOC100821755 cleavage stimulation factor subunit 50 100821755
bdi LOC100821843 luc7-like protein 3 100821843
bdi LOC100821850 protein COP1 SUPPRESSOR 2 100821850
bdi LOC100821942 pre-mRNA-splicing factor SLU7 100821942
bdi LOC100821943 small nuclear ribonucleoprotein E 100821943
bdi LOC100821974 CWF19-like protein 2 100821974
bdi LOC100822246 U1 small nuclear ribonucleoprotein C-1 100822246
bdi LOC100822535 splicing factor U2af small subunit B 100822535
bdi LOC100822634 pentatricopeptide repeat-containing protein At1g55890, mitochondrial 100822634
bdi LOC100822834 sm-like protein LSM3B 100822834
bdi LOC100822879 U1 small nuclear ribonucleoprotein 70 kDa 100822879
bdi LOC100823008 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7-like 100823008
bdi LOC100823085 nuclear cap-binding protein subunit 2 100823085
bdi LOC100823301 U11/U12 small nuclear ribonucleoprotein 35 kDa protein 100823301
bdi LOC100823370 protein pleiotropic regulatory locus 1 100823370
bdi LOC100823388 E3 ubiquitin ligase PARAQUAT TOLERANCE 3 100823388 IEA
bdi LOC100823440 serine/threonine-protein kinase PRP4 homolog 100823440
bdi LOC100823446 zinc finger protein ZOP1 100823446
bdi LOC100823640 protein AAR2 homolog 100823640
bdi LOC100823915 splicing factor 3A subunit 2 100823915
bdi LOC100824168 polypyrimidine tract-binding protein homolog 3 100824168 IEA
bdi LOC100824259 protein high chlorophyll fluorescent 107 100824259 IEA
bdi LOC100824397 serrate RNA effector molecule-like 100824397 IEA
bdi LOC100824755 cleavage and polyadenylation specificity factor subunit 3-I 100824755
bdi LOC100824839 NHP2-like protein 1 100824839
bdi LOC100825209 SART-1 family protein DOT2 100825209
bdi LOC100825234 mRNA-capping enzyme 100825234
bdi LOC100825482 microfibrillar-associated protein 1A 100825482
bdi LOC100825680 serine/arginine-rich splicing factor RS31 100825680
bdi LOC100825761 serine/arginine-rich splicing factor RS31 100825761
bdi LOC100825892 probable small nuclear ribonucleoprotein F 100825892
bdi LOC100825893 pre-mRNA-processing protein 40A 100825893
bdi LOC100826043 protein STABILIZED1 100826043
bdi LOC100826232 serine/arginine-rich splicing factor RS2Z33 100826232
bdi LOC100826392 U11/U12 small nuclear ribonucleoprotein 31 kDa protein 100826392
bdi LOC100826418 putative RNA-binding protein Luc7-like 2 100826418
bdi LOC100826631 transcription elongation factor SPT4 homolog 1 100826631 IEA
bdi LOC100827188 cleavage and polyadenylation specificity factor subunit 6 100827188
bdi LOC100827350 pre-mRNA-splicing factor 18 100827350
bdi LOC100827377 splicing factor U2af small subunit B 100827377
bdi LOC100827431 nuclear intron maturase 3, mitochondrial 100827431 IEA
bdi LOC100827472 protein BUD31 homolog 2 100827472
bdi LOC100827743 AT-rich interactive domain-containing protein 1A 100827743
bdi LOC100827746 cactin 100827746
bdi LOC100828122 intron-binding protein aquarius 100828122
bdi LOC100828224 U4/U6 small nuclear ribonucleoprotein Prp31 homolog 100828224
bdi LOC100828556 mRNA cap guanine-N7 methyltransferase 2 100828556
bdi LOC100828642 probable small nuclear ribonucleoprotein G 100828642
bdi LOC100828701 DEAD-box ATP-dependent RNA helicase 35A 100828701
bdi LOC100828793 coiled-coil domain-containing protein 94 100828793
bdi LOC100828919 WD repeat domain-containing protein 83 100828919
bdi LOC100828951 DEAD-box ATP-dependent RNA helicase 21 100828951
bdi LOC100828958 PHD finger-like domain-containing protein 5B 100828958
bdi LOC100829010 zinc finger CCCH domain-containing protein 16 100829010
bdi LOC100829074 crooked neck-like protein 1 100829074
bdi LOC100829103 coiled-coil domain-containing protein 130 100829103
bdi LOC100829173 regulation of nuclear pre-mRNA domain-containing protein 1B 100829173
bdi LOC100829245 ubiquitin-like protein 5 100829245
bdi LOC100829528 serine/arginine-rich SC35-like splicing factor SCL28 100829528
bdi LOC100829617 pre-mRNA-processing factor 19 100829617
bdi LOC100829657 U11/U12 small nuclear ribonucleoprotein 25 kDa protein 100829657
bdi LOC100829660 nuclear intron maturase 1, mitochondrial 100829660 IEA
bdi LOC100829819 nuclear intron maturase 2, mitochondrial 100829819 IEA
bdi LOC100829988 zinc finger matrin-type protein 2 100829988
bdi LOC100830041 U6 snRNA-associated Sm-like protein LSm6 100830041
bdi LOC100830086 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 100830086
bdi LOC100830158 SRSF protein kinase 1 100830158
bdi LOC100830256 cactin 100830256
bdi LOC100830470 cleavage and polyadenylation specificity factor subunit 2 100830470
bdi LOC100830616 serine/arginine-rich splicing factor SR45 100830616
bdi LOC100830760 cell division cycle 5-like protein 100830760
bdi LOC100831001 E3 ubiquitin ligase PARAQUAT TOLERANCE 3 100831001 IEA
bdi LOC100831005 uncharacterized LOC100831005 100831005
bdi LOC100831112 G patch domain-containing protein TGH homolog 100831112 IEA
bdi LOC100831115 small nuclear ribonucleoprotein Sm D2 100831115
bdi LOC100831316 probable small nuclear ribonucleoprotein G 100831316
bdi LOC100831616 septin and tuftelin-interacting protein 1 homolog 1 100831616
bdi LOC100831686 THO complex subunit 7B 100831686 IEA
bdi LOC100831732 uncharacterized LOC100831732 100831732
bdi LOC100831844 protein PALE CRESS, chloroplastic 100831844
bdi LOC100831866 survival of motor neuron-related-splicing factor 30 100831866 IEA
bdi LOC100832030 U11/U12 small nuclear ribonucleoprotein 65 kDa protein 100832030
bdi LOC100832531 serine/threonine-protein kinase SRPK 100832531
bdi LOC100832621 zinc finger CCCH domain-containing protein 25 100832621
bdi LOC100832685 coilin 100832685
bdi LOC100832725 mRNA cap guanine-N7 methyltransferase 1 100832725
bdi LOC100832764 formin-like protein 20 100832764
bdi LOC100832894 splicing factor U2af small subunit A 100832894
bdi LOC100833204 serine/arginine-rich SC35-like splicing factor SCL30A 100833204
bdi LOC100833665 serine/threonine-protein kinase/endoribonuclease IRE1 100833665 IEA
bdi LOC100833863 PHD finger-like domain-containing protein 5B 100833863
bdi LOC100834120 protein RDM16 100834120
bdi LOC100834268 small nuclear ribonucleoprotein SmD1a 100834268
bdi LOC100834422 serrate RNA effector molecule 100834422 IEA
bdi LOC100834476 110 kDa U5 small nuclear ribonucleoprotein component CLO 100834476
bdi LOC100834495 protein MLN51 homolog 100834495 IEA
bdi LOC100834629 THO complex subunit 7B 100834629 IEA
bdi LOC100835445 BUD13 homolog 100835445
bdi LOC100835462 septin and tuftelin-interacting protein 1 homolog 1 100835462
bdi LOC100835688 splicing factor 3B subunit 1 100835688
bdi LOC100835731 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 100835731
bdi LOC100835825 cleavage and polyadenylation specificity factor subunit 2 100835825
bdi LOC100835883 thioredoxin-like protein 4B 100835883
bdi LOC100836374 RNA-binding protein 25 100836374 IEA
bdi LOC100836380 serine/arginine repetitive matrix protein 1 100836380 IEA
bdi LOC100836698 zinc finger CCCH domain-containing protein 59 100836698
bdi LOC100836755 pre-mRNA-splicing factor SPF27 homolog 100836755 IEA
bdi LOC100836785 small nuclear ribonucleoprotein E 100836785
bdi LOC100836949 polypyrimidine tract-binding protein homolog 3 100836949 IEA
bdi LOC100836983 pre-mRNA-splicing factor CWC25 homolog 100836983
bdi LOC100837074 sm-like protein LSM5 100837074
bdi LOC100837105 regulation of nuclear pre-mRNA domain-containing protein 1A 100837105
bdi LOC100837117 UPF0400 protein C337.03 100837117
bdi LOC100837129 FIP1[V]-like protein 100837129 IEA
bdi LOC100837175 cleavage stimulating factor 64 100837175
bdi LOC100837197 pre-mRNA-splicing factor ISY1 homolog 100837197
bdi LOC100837346 thioredoxin-like protein YLS8 100837346
bdi LOC100837363 thioredoxin-like protein YLS8 100837363
bdi LOC100837530 uncharacterized LOC100837530 100837530 IEA
bdi LOC100837552 protein BUD31 homolog 1 100837552
bdi LOC100837627 ATP-dependent RNA helicase DEAH11, chloroplastic 100837627
bdi LOC100837645 thioredoxin-like protein YLS8 100837645
bdi LOC100837688 splicing factor SF3a60 homolog 100837688
bdi LOC100837794 uncharacterized LOC100837794 100837794
bdi LOC100837853 zinc finger CCCH domain-containing protein 45 100837853
bdi LOC100837922 pre-mRNA-processing factor 19 100837922
bdi LOC100838039 RNA-binding protein cabeza 100838039
bdi LOC100838204 microfibrillar-associated protein 1 100838204
bdi LOC100838348 U6 snRNA-associated Sm-like protein LSm6 100838348
bdi LOC100838398 splicing factor 3B subunit 2 100838398
bdi LOC100838641 CWF19-like protein 2 100838641
bdi LOC100838676 RNA-binding protein 10 100838676
bdi LOC100838688 sm-like protein LSM8 100838688
bdi LOC100838808 gem-associated protein 2 100838808
bdi LOC100838940 chloride conductance regulatory protein ICln 100838940
bdi LOC100838953 cleavage stimulation factor subunit 77 100838953
bdi LOC100839023 splicing factor 3B subunit 3 100839023
bdi LOC100839326 E3 ubiquitin-protein ligase RBBP6 100839326 IEA
bdi LOC100839422 chloride conductance regulatory protein ICln 100839422
bdi LOC100839483 U2 small nuclear ribonucleoprotein A' 100839483
bdi LOC100839501 serine/arginine-rich splicing factor RS2Z32 100839501
bdi LOC100839727 RNA-binding protein 39 100839727 IEA
bdi LOC100839729 splicing factor 3B subunit 1 100839729
bdi LOC100839798 serrate RNA effector molecule 100839798 IEA
bdi LOC100839993 protein MLN51 homolog 100839993 IEA
bdi LOC100840159 cleavage stimulating factor 64 100840159
bdi LOC100840198 uncharacterized LOC100840198 100840198
bdi LOC100840252 pre-mRNA-splicing factor CWC22 homolog 100840252
bdi LOC100840289 pre-mRNA-splicing factor SYF1 100840289
bdi LOC100840366 mRNA-capping enzyme 100840366
bdi LOC100840735 SNW/SKI-interacting protein A 100840735
bdi LOC100841012 thioredoxin-like protein YLS8 100841012
bdi LOC100841075 SART-1 family protein DOT2 100841075
bdi LOC100841146 serine/arginine-rich splicing factor RS41 100841146
bdi LOC100841185 pre-mRNA-splicing factor 18 100841185
bdi LOC100841222 U1 small nuclear ribonucleoprotein A 100841222
bdi LOC100841329 transcriptional repressor ILP1 100841329
bdi LOC100841438 uncharacterized LOC100841438 100841438
bdi LOC100841643 uncharacterized LOC100841643 100841643
bdi LOC100841801 sm-like protein LSM7 100841801
bdi LOC100841856 pre-mRNA-splicing factor cwc22-like 100841856
bdi LOC100841881 uncharacterized protein At4g14342 100841881
bdi LOC100842063 pre-mRNA-processing factor 17 100842063
bdi LOC100842128 serine/arginine-rich splicing factor RS2Z32 100842128
bdi LOC100842233 thioredoxin-like protein YLS8 100842233
bdi LOC100842258 RNA-binding protein 25 100842258 IEA
bdi LOC100842452 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 100842452
bdi LOC100842484 pre-mRNA-processing factor 39 100842484
bdi LOC100842527 luc7-like protein 3 100842527
bdi LOC100842673 U4/U6.U5 tri-snRNP-associated protein 2 100842673 IEA
bdi LOC100842763 E3 ubiquitin ligase PARAQUAT TOLERANCE 3 100842763 IEA
bdi LOC100842882 putative RNA-binding protein Luc7-like 2 100842882
bdi LOC100842883 ubiquitin-like protein 5 100842883
bdi LOC100842999 serine/threonine-protein kinase prpf4B 100842999
bdi LOC100843152 THO complex subunit 2 100843152 IEA
bdi LOC100843153 suppressor of mec-8 and unc-52 protein homolog 1 100843153
bdi LOC100843266 pentatricopeptide repeat-containing protein OTP51, chloroplastic 100843266
bdi LOC100843302 suppressor of mec-8 and unc-52 protein homolog 2 100843302
bdi LOC100843324 protein MOS2 100843324
bdi LOC100843379 spliceosome-associated protein 130 A 100843379
bdi LOC100843890 sm-like protein LSM2 100843890
bdi LOC100843906 putative beta-hexosaminidase 100843906 IEA
bdi LOC100844088 NHP2-like protein 1 100844088
bdi LOC100844606 WW domain-binding protein 11 100844606
bdi LOC100845144 splicing factor U2AF-associated protein 2 100845144
bdi LOC100845178 probable splicing factor 3A subunit 1 100845178
bdi LOC100845190 SUPPRESSOR OF ABI3-5 100845190
bdi LOC100845209 mRNA cap guanine-N7 methyltransferase 1 100845209
bdi LOC100845239 SRSF protein kinase 1 100845239
bdi LOC100845326 U2 small nuclear ribonucleoprotein B'' 100845326
bdi LOC100845331 RNA-binding protein 39 100845331 IEA
bdi LOC100845468 serine-threonine kinase receptor-associated protein 100845468
bdi LOC100845593 serine/arginine repetitive matrix protein 2 100845593
bdi LOC100845610 U1 small nuclear ribonucleoprotein 70 kDa 100845610
bdi LOC100845619 protein CWC15 homolog 100845619
bdi LOC100845740 protein BUD31 homolog 3 100845740
bdi LOC100845741 proline-rich protein 36 100845741
bdi LOC100845778 serine/arginine-rich splicing factor SR45 100845778
bdi LOC100845942 lariat debranching enzyme 100845942
bdi LOC100846226 serine/arginine-rich splicing factor RSZ23 100846226
bdi LOC100846277 THO complex subunit 2 100846277 IEA
bdi LOC100846281 serine/arginine-rich splicing factor RSZ21A 100846281
bdi LOC100846329 small nuclear ribonucleoprotein SmD1a 100846329
bdi LOC100846384 pre-mRNA-processing-splicing factor 8A 100846384
bdi LOC100846427 sm-like protein LSM7 100846427
bdi LOC100846442 U4/U6 small nuclear ribonucleoprotein PRP4-like protein 100846442
bdi LOC100846455 cleavage and polyadenylation specificity factor subunit 3-I 100846455
bdi LOC100846703 DEAD-box ATP-dependent RNA helicase 42 100846703
bdi LOC100846717 serine/arginine-rich splicing factor RSZ21 100846717
bdi LOC104581395 septin and tuftelin-interacting protein 1 homolog 1 104581395
bdi LOC104581437 septin and tuftelin-interacting protein 1 homolog 1 104581437
bdi LOC104581843 pre-mRNA-processing protein 40A 104581843
bdi LOC104582212 SNW/SKI-interacting protein B-like 104582212
bdi LOC104582243 protein MOS2-like 104582243
bdi LOC104582540 probable splicing factor 3A subunit 1 104582540
bdi LOC106865894 nuclear intron maturase 4, mitochondrial 106865894 IEA
bdi LOC106865937 small nuclear ribonucleoprotein-associated protein B' 106865937
bdi LOC106866699 maturase K 106866699 IEA
bdi LOC111828500 uncharacterized LOC111828500 111828500 IEA
bdi LOC112269372 uncharacterized LOC112269372 112269372


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