cis; ACGCGGA


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
TCACGCGGATC OCETYPEIINTHISTONE [ref]

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of ACGCGGA

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of ACGCGGA.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.67At1g28370ERF domain protein 11 (ERF11) AP2-EREBP
0.67At3g52800zinc finger (AN1-like) family protein C2H2
0.66At5g24590turnip crinkle virus-interacting protein / TCV-interacting protein (TIP) ((TIP)) NAC
0.66At5g49520WRKY family transcription factor ((WRKY48)) WRKY
0.65At3g15210ethylene-responsive element-binding factor 4 (ERF4) ((ATERF4, RAP2.5)) AP2-EREBP
0.64At3g23250myb family transcription factor (MYB15) MYB
0.62At1g22810AP2 domain-containing transcription factor, putative AP2-EREBP
0.61At1g22510zinc finger (C3HC4-type RING finger) family protein C3H
0.61At2g44840ethylene-responsive element-binding protein, putative AP2-EREBP
0.60At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.60At5g01380expressed protein Trihelix
0.59At3g49530no apical meristem (NAM) family protein NAC
0.58At4g34410AP2 domain-containing transcription factor, putative AP2-EREBP
0.58At4g17230scarecrow-like transcription factor 13 (SCL13) GRAS
0.58At2g38250DNA-binding protein-related Trihelix

link to other 304 cis elements in ATTED

similar seq.
ACGCGGA
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TCCGCGT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
ACGCGGA1.000.07116
AACGCGT0.850.10127
CCGCGTT0.830.1017
TCCGCGT0.820.07156
CGCGTTC0.820.06177
CGCGTTT0.810.1193
ATACGCG0.810.0639
ACGCGTT0.810.1096
AAACGCG0.800.07149
ACGCGTA0.800.1074