cis; TCCGCGT


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
GATCCGCGNNNNNNNNNNNNNNACCAATCS OCETYPEIIINTHISTONE [ref]

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of TCCGCGT

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of TCCGCGT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.56At1g22510zinc finger (C3HC4-type RING finger) family protein C3H
0.54At5g24590turnip crinkle virus-interacting protein / TCV-interacting protein (TIP) ((TIP)) NAC
0.54At2g44840ethylene-responsive element-binding protein, putative AP2-EREBP
0.53At1g22810AP2 domain-containing transcription factor, putative AP2-EREBP
0.53At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.52At1g28370ERF domain protein 11 (ERF11) AP2-EREBP
0.52At3g23250myb family transcription factor (MYB15) MYB
0.52At4g34410AP2 domain-containing transcription factor, putative AP2-EREBP
0.52At5g01380expressed protein Trihelix
0.52At5g49520WRKY family transcription factor ((WRKY48)) WRKY
0.51At1g12610DRE-binding protein, putative / CRT/DRE-binding factor, putative ((DDF1)) AP2-EREBP
0.50At4g32800AP2 domain-containing transcription factor TINY, putative AP2-EREBP
0.49At4g31800WRKY family transcription factor ((WRKY18)) WRKY
0.48At3g49530no apical meristem (NAM) family protein NAC
0.48At3g15210ethylene-responsive element-binding factor 4 (ERF4) ((ATERF4, RAP2.5)) AP2-EREBP

link to other 304 cis elements in ATTED

similar seq.
TCCGCGT
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; ACGCGGA
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
TCCGCGT1.000.07156
CCGCGTT0.850.1017
ACGCGGA0.820.07116
CGCGTTC0.810.06177
AACGCGT0.810.10127
CGCGTTT0.800.1193
ACGCGTA0.780.1074
CCGCGTA0.770.07200
ACCGCGT0.770.1098
ACGCGTT0.770.1096