cis; CTCCGCG


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CTCCGCG

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CTCCGCG.

[Help]
correlTFfunction ((alias))*TF family
(link to AGRIS)
0.56At4g34410AP2 domain-containing transcription factor, putative AP2-EREBP
0.52At4g17230scarecrow-like transcription factor 13 (SCL13) GRAS
0.51At1g28370ERF domain protein 11 (ERF11) AP2-EREBP
0.50At2g44840ethylene-responsive element-binding protein, putative AP2-EREBP
0.50At1g32640basic helix-loop-helix (bHLH) protein (RAP-1) ((ATMYC2)) BHLH
0.50At2g46510basic helix-loop-helix (bHLH) family protein BHLH
0.49At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.47At4g31800WRKY family transcription factor ((WRKY18)) WRKY
0.47At5g47220ethylene-responsive element-binding factor 2 (ERF2) ((ERF2)) AP2-EREBP
0.47At1g12610DRE-binding protein, putative / CRT/DRE-binding factor, putative ((DDF1)) AP2-EREBP
0.46At3g23250myb family transcription factor (MYB15) MYB
0.46At3g19580zinc finger (C2H2 type) protein 2 (AZF2) ((AZF2)) C2H2
0.45At3g49530no apical meristem (NAM) family protein NAC
0.45At5g24590turnip crinkle virus-interacting protein / TCV-interacting protein (TIP) ((TIP)) NAC
0.45At5g66070zinc finger (C3HC4-type RING finger) family protein C3H

link to other 304 cis elements in ATTED

similar seq.
CTCCGCG
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CGCGGAG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CTCCGCG1.000.07100
GCGTTCG0.810.0794
ACTCCGC0.780.08117
CAGCATG0.730.079
CGCGTTC0.710.06177
CCGCGTT0.690.1017
CCGTGGG0.680.06171
ACGCGCT0.660.09111
ACCGCGT0.660.1098
ATACGCG0.660.0639