cis; TCGACAC


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of TCGACAC

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of TCGACAC.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.66At1g01720no apical meristem (NAM) family protein ((ATAF1)) NAC
0.59At2g46270G-box binding factor 3 (GBF3) ((GBF3)) bZIP
0.58At5g12840CCAAT-binding transcription factor (CBF-B/NF-YA) family protein ((HAP2A)) CCAAT-HAP2
0.56At1g77450no apical meristem (NAM) family protein NAC
0.52At4g27410no apical meristem (NAM) family protein (RD26) ((RD26)) NAC
0.52At1g22985AP2 domain-containing transcription factor, putative AP2-EREBP
0.51At3g02990heat shock factor protein 2 (HSF2) / heat shock transcription factor 2 (HSTF2) ((ATHSFA1E)) HSF
0.50At3g19580zinc finger (C2H2 type) protein 2 (AZF2) ((AZF2)) C2H2
0.50At1g56170transcription factor, putative ((HAP5B)) CCAAT-HAP5
-0.49At5g61420myb family transcription factor (MYB28) ((MYB28)) MYB
0.48At4g36900AP2 domain-containing protein RAP2.10 (RAP2.10) AP2-EREBP
0.47At5g05410DRE-binding protein (DREB2A) ((DREB2A)) AP2-EREBP
0.47At1g54830CCAAT-box binding transcription factor Hap5a, putative CCAAT-HAP5
0.47At3g30210myb family transcription factor (MYB121) ((MYB121)) MYB
0.47At2g18550homeobox-leucine zipper family protein Homeobox

link to other 304 cis elements in ATTED

similar seq.
TCGACAC
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; GTGTCGA
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
TCGACAC1.000.0774
CGTGTCC0.860.0882
CACGTGT0.840.1292
CTCGACA0.820.06103
ACGTGTC0.790.1184
AGACACG0.790.07112
CGCCACG0.770.06129
CGTGTCA0.760.0889
GCCGACC0.750.0781
ACACGTG0.720.1162