cis; CTCGACA


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CTCGACA

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CTCGACA.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
-0.59At5g61420myb family transcription factor (MYB28) ((MYB28)) MYB
-0.53At5g63780zinc finger (C3HC4-type RING finger) family protein C3H
0.51At2g46270G-box binding factor 3 (GBF3) ((GBF3)) bZIP
0.50At1g01720no apical meristem (NAM) family protein ((ATAF1)) NAC
0.46At5g48655zinc finger (C3HC4-type RING finger) family protein C3H
0.46At5g12840CCAAT-binding transcription factor (CBF-B/NF-YA) family protein ((HAP2A)) CCAAT-HAP2
0.46At3g15500no apical meristem (NAM) family protein (NAC3) ((ATNAC3)) NAC
0.46At5g08190TATA-binding protein-associated phosphoprotein Dr1 protein, putative CCAAT-DR1
0.46At2g38250DNA-binding protein-related Trihelix
0.45At1g22985AP2 domain-containing transcription factor, putative AP2-EREBP
-0.45At5g09460expressed protein BHLH
0.45At5g01380expressed protein Trihelix
0.44At3g10800bZIP transcription factor family protein bZIP
0.44At2g42400expressed protein VOZ-9
0.44At4g33940zinc finger (C3HC4-type RING finger) family protein C3H

link to other 304 cis elements in ATTED

similar seq.
CTCGACA
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TGTCGAG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CTCGACA1.000.06103
TCGACAC0.820.0774
CGTGTCC0.780.0882
AACACGT0.770.0794
CACGTGT0.750.1292
AGACACG0.740.07112
CGTCACA0.740.07131
GCCGACC0.730.0781
ACGTGTC0.720.1184
AACGTGT0.720.0790