cis; CCACGTA

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
TCCACGTAGA OPAQUE2ZM22Z [ref] [ref] [ref] [ref]
GCCACGTACA ABRE3HVA22 [ref] [ref] [ref]
TCCACGTACT O2F3BE2S1 [ref]
   ACGT    ACGTATERD1 [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CCACGTA

[Help]
GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CCACGTA.

[Help]
correlTFfunction ((alias))*TF family
(link to AGRIS)
0.55At4g27410no apical meristem (NAM) family protein (RD26) ((RD26)) NAC
0.52At5g67300myb family transcription factor MYB
0.50At4g05100myb family transcription factor (MYB74) MYB
0.47At4g37790homeobox-leucine zipper protein 22 (HAT22) / HD-ZIP protein 22 ((HAT22)) Homeobox
0.46At3g61890homeobox-leucine zipper protein 12 (HB-12) / HD-ZIP transcription factor 12 ((ATHB-12)) Homeobox
0.45At5g62470myb family transcription factor (MYB96) ((MYB96)) MYB
0.45At3g15210ethylene-responsive element-binding factor 4 (ERF4) ((ATERF4, RAP2.5)) AP2-EREBP
0.45At1g77450no apical meristem (NAM) family protein NAC
0.45At3g24520heat shock transcription factor family protein ((AT-HSFC1)) HSF
0.44At3g52800zinc finger (AN1-like) family protein C2H2
0.44At3g50060myb family transcription factor MYB
0.41At3g19580zinc finger (C2H2 type) protein 2 (AZF2) ((AZF2)) C2H2
0.40At1g50600scarecrow-like transcription factor 5 (SCL5) GRAS
0.40At1g27730zinc finger (C2H2 type) family protein (ZAT10) / salt-tolerance zinc finger protein (STZ) ((ZAT10)) C2H2

link to other 304 cis elements in ATTED

similar seq.
←CCACGTA→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TACGTGG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CCACGTA1.000.06143
ACGTGTC0.780.1184
CGTGTCC0.770.0882
ACACGTG0.760.1162
CACGTGT0.750.1292
CGTGTCA0.740.0889
AACACGT0.740.0794
CGTGGCA0.720.08110
CACGTGG0.720.09112
AGACACG0.710.07112