GO:0006364 rRNA processing

183 ath genes in this database.
361 gma genes in this database.
194 sly genes in this database.
194 osa genes in this database.
222 zma genes in this database.
309 bra genes in this database.
198 vvi genes in this database.
232 ppo genes in this database.
201 mtr genes in this database.
599 tae genes in this database.
223 hvu genes in this database.
477 ghi genes in this database.
647 bna genes in this database.
218 cre genes in this database.
205 sbi genes in this database.
174 sot genes in this database.
179 cit genes in this database.
191 bdi genes in this database.
360 nta genes in this database.

[QuickGO]

term: rRNA processing
goid: GO:0006364

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Shaded genes do not have GeneChip data. The output was limited up to 10000.
Species Symbol Gene
coexpression		 Locus
page 		Full name* Entrez Gene ID Evidence*
bra LOC103827596 60S ribosomal protein L7-2 103827596
bra LOC103827733 uncharacterized LOC103827733 103827733 IEA
bra LOC103827960 rRNA-processing protein EFG1 103827960
bra LOC103828170 H/ACA ribonucleoprotein complex subunit 3-like protein 103828170
bra LOC103828224 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 103828224
bra LOC103828272 uncharacterized tRNA/rRNA methyltransferase MSMEG_6073/MSMEI_5913 103828272
bra LOC103828305 UBP1-associated proteins 1C 103828305 IEA
bra LOC103828537 ribonuclease E/G-like protein, chloroplastic 103828537 IEA
bra LOC103828668 protein KRI1 homolog 103828668
bra LOC103828692 bystin 103828692 IEA
bra LOC103828722 ribosome production factor 2 homolog 103828722
bra LOC103828778 bystin 103828778 IEA
bra LOC103829010 bystin-like 103829010 IEA
bra LOC103829138 mRNA turnover protein 4 homolog 103829138 IEA
bra LOC103829199 DExH-box ATP-dependent RNA helicase DExH9 103829199
bra LOC103829340 multifunctional methyltransferase subunit TRM112 homolog A 103829340
bra LOC103829595 U3 small nucleolar ribonucleoprotein protein MPP10 103829595 IEA
bra LOC103829618 ribosomal RNA small subunit methyltransferase, mitochondrial 103829618
bra LOC103829657 multifunctional methyltransferase subunit TRM112 homolog B 103829657
bra LOC103829952 40S ribosomal protein S21-2 103829952
bra LOC103830081 nucleolar protein 10 103830081
bra LOC103830088 H/ACA ribonucleoprotein complex subunit 4 103830088
bra LOC103830231 sm-like protein LSM36B 103830231
bra LOC103830261 exosome complex component RRP45A 103830261
bra LOC103830455 60S ribosomal protein L7-1 103830455
bra LOC103830878 protein mak16 103830878
bra LOC103831743 pumilio homolog 23 103831743
bra LOC103832323 ribosome production factor 2 homolog 103832323
bra LOC103832457 probable mediator of RNA polymerase II transcription subunit 36b 103832457
bra LOC103832719 heavy metal-associated isoprenylated plant protein 41 103832719
bra LOC103832784 60S ribosomal protein L7-2 103832784
bra LOC103833060 probable RNA 3'-terminal phosphate cyclase-like protein 103833060
bra LOC103833109 protein DCL homolog, chloroplastic 103833109
bra LOC103833537 40S ribosomal protein S16-3-like 103833537
bra LOC103833543 pre-rRNA-processing protein TSR2 homolog 103833543
bra LOC103833681 DEAD-box ATP-dependent RNA helicase 5 103833681 IEA
bra LOC103833913 UDP-glucose 4-epimerase 5 103833913 IEA
bra LOC103834090 periodic tryptophan protein 1 homolog 103834090 IEA
bra LOC103834091 uncharacterized WD repeat-containing protein C17D11.16 103834091 IEA
bra LOC103834181 protein mak16 103834181
bra LOC103834407 probable rRNA-processing protein EBP2 homolog 103834407 IEA
bra LOC103834571 putative exosome complex component rrp40 103834571
bra LOC103834774 U3 small nucleolar RNA-associated protein 6 homolog 103834774
bra LOC103834857 pre-rRNA 2'-O-ribose RNA methyltransferase 103834857
bra LOC103834862 mediator of RNA polymerase II transcription subunit 36a 103834862
bra LOC103834989 nucleolar protein 6 103834989 IEA
bra LOC103834996 probable ribosome-binding factor A, chloroplastic 103834996 IEA
bra LOC103835228 proline-, glutamic acid- and leucine-rich protein 1 103835228 IEA
bra LOC103835442 mRNA turnover protein 4 homolog 103835442 IEA
bra LOC103835597 peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 103835597 IEA
bra LOC103835946 U3 small nucleolar RNA-associated protein 25 103835946
bra LOC103836025 periodic tryptophan protein 2 103836025
bra LOC103836027 WD repeat-containing protein 43 103836027
bra LOC103836145 bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 103836145 IEA
bra LOC103836148 ribosomal RNA processing protein 36 homolog 103836148
bra LOC103836317 double-stranded RNA-binding protein 1 103836317 IEA
bra LOC103836546 box C/D snoRNA protein 1 103836546
bra LOC103836750 uncharacterized protein C57A7.06 103836750 IEA
bra LOC103836813 ribosome production factor 1 103836813
bra LOC103837008 RNA exonuclease 4 103837008 IEA
bra LOC103837076 nuclear nucleic acid-binding protein C1D 103837076
bra LOC103837110 probable 28S rRNA (cytosine-C(5))-methyltransferase 103837110
bra LOC103837171 40S ribosomal protein S21-2 103837171
bra LOC103837243 RRP15-like protein 103837243
bra LOC103837320 pre-rRNA-processing protein TSR2 homolog 103837320
bra LOC103837394 peter Pan-like protein 103837394 IEA
bra LOC103837515 40S ribosomal protein S28-2 103837515
bra LOC103837692 U3 small nucleolar ribonucleoprotein protein MPP10 103837692 IEA
bra LOC103837961 DEAD-box ATP-dependent RNA helicase 51 103837961
bra LOC103838016 H/ACA ribonucleoprotein complex subunit 3-like protein 103838016
bra LOC103838098 U3 small nucleolar ribonucleoprotein protein IMP4 103838098 IEA
bra LOC103838165 UDP-glucose 4-epimerase 4 103838165 IEA
bra LOC103838293 bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 3 103838293 IEA
bra LOC103838515 dual-specificity RNA methyltransferase RlmN 103838515
bra LOC103838559 exosome complex component RRP43 103838559
bra LOC103838580 DExH-box ATP-dependent RNA helicase DExH9 103838580
bra LOC103839064 protein NUCLEAR FUSION DEFECTIVE 2 103839064 IEA
bra LOC103839500 60S ribosomal protein L7-2 103839500
bra LOC103839875 NHP2-like protein 1 103839875
bra LOC103840203 DEAD-box ATP-dependent RNA helicase 5 103840203 IEA
bra LOC103840218 probable ribosomal protein S11, mitochondrial 103840218
bra LOC103840231 bystin 103840231 IEA
bra LOC103840422 proline-, glutamic acid- and leucine-rich protein 1 103840422 IEA
bra LOC103840549 mRNA turnover protein 4 homolog 103840549 IEA
bra LOC103840621 peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 103840621 IEA
bra LOC103840749 ribosome biogenesis protein BRX1 homolog 1-like 103840749 IEA
bra LOC103841047 serine/threonine-protein kinase rio2 103841047
bra LOC103841188 40S ribosomal protein S14-2 103841188
bra LOC103841308 40S ribosomal protein S21-2 103841308
bra LOC103841473 eukaryotic translation initiation factor 6-2 103841473
bra LOC103841555 pre-rRNA-processing protein ESF2 103841555
bra LOC103841603 nucleolar protein 10 103841603
bra LOC103841604 ribosomal RNA small subunit methyltransferase NEP1 103841604
bra LOC103841624 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic 103841624
bra LOC103841691 RNA cytidine acetyltransferase 2 103841691
bra LOC103841827 sm-like protein LSM6A 103841827
bra LOC103841888 probable U3 small nucleolar RNA-associated protein 11 103841888 IEA
bra LOC103841899 exosome complex component RRP45A 103841899
bra LOC103842599 H/ACA ribonucleoprotein complex subunit 3-like protein 103842599
bra LOC103843114 ribosomal RNA processing protein 36 homolog 103843114
bra LOC103843143 putative pre-16S rRNA nuclease 103843143
bra LOC103843377 40S ribosomal protein S7 103843377 IEA
bra LOC103843541 ribosome biogenesis protein BMS1 homolog 103843541
bra LOC103843813 ribosomal RNA small subunit methyltransferase, chloroplastic 103843813
bra LOC103843917 probable RNA 3'-terminal phosphate cyclase-like protein 103843917
bra LOC103844015 ribosome biogenesis protein BMS1 homolog 103844015
bra LOC103844335 protein RRP6-like 1 103844335
bra LOC103844513 exosome complex component RRP4 homolog 103844513
bra LOC103844613 endoribonuclease Dicer homolog 1 103844613 IEA
bra LOC103844942 DEAD-box ATP-dependent RNA helicase 32 103844942 IEA
bra LOC103845371 uncharacterized LOC103845371 103845371
bra LOC103845662 ribosomal RNA processing protein 1 homolog 103845662 IEA
bra LOC103845687 dicer-like protein 4 103845687 IEA
bra LOC103845690 40S ribosomal protein S8-1 103845690
bra LOC103845839 40S ribosomal protein S16-3 103845839
bra LOC103845866 rRNA biogenesis protein RRP5 103845866 IEA
bra LOC103845969 40S ribosomal protein S14-2 103845969
bra LOC103846118 protein RRP6-like 3 103846118
bra LOC103846122 25S rRNA (cytosine-C(5))-methyltransferase nop2 103846122
bra LOC103846127 uncharacterized protein At4g26485 103846127
bra LOC103846295 SART-1 family protein DOT2 103846295
bra LOC103846300 transducin beta-like protein 3 103846300
bra LOC103846353 40S ribosomal protein S7-3 103846353 IEA
bra LOC103846516 U3 small nucleolar RNA-associated protein 18 homolog 103846516 IEA
bra LOC103846760 polynucleotide 5'-hydroxyl-kinase NOL9 103846760
bra LOC103846771 ribosomal RNA small subunit methyltransferase H 103846771
bra LOC103846789 putative RNA methyltransferase At5g10620 103846789 IEA
bra LOC103846840 ribosome biogenesis protein TSR3 homolog 103846840
bra LOC103846956 40S ribosomal protein S14-2 103846956
bra LOC103846974 ribosome biogenesis protein NSA2 homolog 103846974
bra LOC103847136 H/ACA ribonucleoprotein complex subunit 2-like protein 103847136
bra LOC103847273 uncharacterized RNA-binding protein C1827.05c 103847273
bra LOC103847354 40S ribosomal protein S28-1 103847354
bra LOC103847436 60S ribosomal protein L35-4 103847436
bra LOC103847471 probable U3 small nucleolar RNA-associated protein 7 103847471
bra LOC103847980 DEAD-box ATP-dependent RNA helicase 57 103847980
bra LOC103848098 60S ribosomal protein L35-1 103848098
bra LOC103848827 rRNA-processing protein EFG1 103848827
bra LOC103848930 40S ribosomal protein S16-3 103848930
bra LOC103849117 exosome complex component RRP42 103849117
bra LOC103849297 bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 3 103849297 IEA
bra LOC103849552 pre-rRNA-processing protein TSR1 homolog 103849552
bra LOC103849913 serine/threonine-protein phosphatase PP1 isozyme 9 103849913
bra LOC103850054 40S ribosomal protein S16-3 103850054
bra LOC103850193 uncharacterized protein At4g26485-like 103850193
bra LOC103850212 20S-pre-rRNA D-site endonuclease nob1-like 103850212
bra LOC103850267 putative pre-16S rRNA nuclease 103850267
bra LOC103850454 60S ribosomal protein L35-4 103850454
bra LOC103850516 40S ribosomal protein S28-2 103850516
bra LOC103850554 uncharacterized RNA-binding protein C1827.05c 103850554
bra LOC103850618 ribosome biogenesis protein NSA2 homolog 103850618
bra LOC103850685 H/ACA ribonucleoprotein complex subunit 2-like protein 103850685
bra LOC103850911 U3 small nucleolar RNA-associated protein 18 homolog 103850911 IEA
bra LOC103851003 U3 small nucleolar ribonucleoprotein protein IMP3 103851003 IEA
bra LOC103851029 40S ribosomal protein S7-3 103851029 IEA
bra LOC103851063 transducin beta-like protein 3 103851063
bra LOC103851163 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 103851163
bra LOC103851341 40S ribosomal protein S8-1 103851341
bra LOC103851578 uncharacterized LOC103851578 103851578
bra LOC103851784 18S rRNA (guanine-N(7))-methyltransferase RID2-like 103851784
bra LOC103851856 probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 103851856
bra LOC103851925 uncharacterized protein At4g26485 103851925
bra LOC103851926 uncharacterized protein At4g26485 103851926
bra LOC103852096 mediator of RNA polymerase II transcription subunit 36a 103852096
bra LOC103852375 midasin 103852375 IEA
bra LOC103852551 nucleolar protein 14 103852551
bra LOC103852672 protein MAK16 homolog 103852672
bra LOC103853221 60S ribosomal protein L7-1 103853221
bra LOC103853527 H/ACA ribonucleoprotein complex subunit 4 103853527
bra LOC103854050 putative ribosome biogenesis protein slx9-like 103854050
bra LOC103854070 methyltransferase-like protein 5 103854070
bra LOC103854107 zinc finger HIT domain-containing protein 3 103854107
bra LOC103854209 RNA exonuclease 4 103854209 IEA
bra LOC103854246 ATP-dependent RNA helicase DEAH13 103854246
bra LOC103854669 40S ribosomal protein S21-2 103854669
bra LOC103854703 probable 28S rRNA (cytosine-C(5))-methyltransferase 103854703
bra LOC103854704 periodic tryptophan protein 1 homolog 103854704 IEA
bra LOC103855007 protein EMBRYO DEFECTIVE 514 103855007
bra LOC103855542 40S ribosomal protein S28-1 103855542
bra LOC103855657 protein SLOW WALKER 1 103855657 IEA
bra LOC103855764 H/ACA ribonucleoprotein complex subunit 2-like protein 103855764
bra LOC103855960 uncharacterized LOC103855960 103855960
bra LOC103856024 eukaryotic translation initiation factor 6-2 103856024
bra LOC103856085 pescadillo homolog 103856085
bra LOC103856160 U3 small nucleolar ribonucleoprotein protein IMP3 103856160 IEA
bra LOC103856182 40S ribosomal protein S7-3 103856182 IEA
bra LOC103856285 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 103856285
bra LOC103856304 40S ribosomal protein S16-3-like 103856304
bra LOC103856428 NHP2-like protein 1 103856428
bra LOC103856438 40S ribosomal protein S8-1 103856438
bra LOC103856762 18S rRNA (guanine-N(7))-methyltransferase RID2 103856762
bra LOC103856920 periodic tryptophan protein 1 homolog 103856920 IEA
bra LOC103857404 RAP domain-containing protein, chloroplastic 103857404
bra LOC103857606 40S ribosomal protein S14-2 103857606
bra LOC103857753 ribosome biogenesis regulatory protein homolog 103857753
bra LOC103857864 60S ribosomal protein L35-2 103857864
bra LOC103858087 something about silencing protein 10 103858087
bra LOC103858117 60S ribosomal protein L7-3 103858117
bra LOC103858155 ribosome biogenesis protein BOP1 homolog 103858155
bra LOC103858246 ribosomal RNA small subunit methyltransferase 103858246
bra LOC103858433 ribosomal RNA small subunit methyltransferase G 103858433 IEA
bra LOC103858643 NHP2-like protein 1 103858643
bra LOC103858678 U3 small nucleolar RNA-associated protein 21 homolog 103858678 IEA
bra LOC103858970 40S ribosomal protein S7 103858970 IEA
bra LOC103859025 40S ribosomal protein S16-3 103859025
bra LOC103859164 uncharacterized protein At3g06530 103859164
bra LOC103859293 60S ribosomal protein L35-1 103859293
bra LOC103859321 ribonuclease III domain-containing protein RNC1, chloroplastic 103859321 IEA
bra LOC103859393 40S ribosomal protein S14-2 103859393
bra LOC103859624 ribosome biogenesis protein BRX1 homolog 1 103859624 IEA
bra LOC103859759 DEAD-box ATP-dependent RNA helicase 51 103859759
bra LOC103859819 dual-specificity RNA methyltransferase RlmN 1 103859819
bra LOC103859967 probable rRNA-processing protein EBP2 homolog 103859967 IEA
bra LOC103859984 protein MAK16 homolog 103859984
bra LOC103860007 NHP2-like protein 1 103860007
bra LOC103860702 serine/threonine-protein kinase rio2 103860702
bra LOC103861448 UDP-glucose 4-epimerase 2 103861448 IEA
bra LOC103861558 UDP-glucose 4-epimerase 2 103861558 IEA
bra LOC103861582 mediator of RNA polymerase II transcription subunit 36a 103861582
bra LOC103861588 pre-rRNA 2'-O-ribose RNA methyltransferase 103861588
bra LOC103861832 DDB1- and CUL4-associated factor 13 103861832
bra LOC103861854 zinc finger HIT domain-containing protein 3 103861854
bra LOC103861855 methyltransferase-like protein 5 103861855
bra LOC103862372 probable ribosome-binding factor A, chloroplastic 103862372 IEA
bra LOC103862714 chloroplast stem-loop binding protein of 41 kDa a, chloroplastic 103862714 IEA
bra LOC103862887 probable U3 small nucleolar RNA-associated protein 11 103862887 IEA
bra LOC103862924 sm-like protein LSM6A 103862924
bra LOC103863145 eukaryotic translation initiation factor 6-2 103863145
bra LOC103863277 40S ribosomal protein S21-2 103863277
bra LOC103863368 probable mediator of RNA polymerase II transcription subunit 36b 103863368
bra LOC103863799 calponin homology domain-containing protein DDB_G0272472 103863799 IEA
bra LOC103864065 20S-pre-rRNA D-site endonuclease nob1 103864065
bra LOC103864230 RNA exonuclease 4-like 103864230 IEA
bra LOC103864244 RNA N6-adenosine-methyltransferase mettl16 103864244
bra LOC103864697 endoribonuclease YBEY, chloroplastic 103864697 IEA
bra LOC103865199 protein RRP6-like 3 103865199
bra LOC103865520 40S ribosomal protein S14-2 103865520
bra LOC103865644 ribosome biogenesis regulatory protein homolog 103865644
bra LOC103865796 ribosome biogenesis protein NOP53 103865796 IEA
bra LOC103866009 60S ribosomal protein L35-2-like 103866009
bra LOC103866093 uncharacterized LOC103866093 103866093
bra LOC103866124 60S ribosomal protein L7-3 103866124
bra LOC103866328 RNA exonuclease 4 103866328 IEA
bra LOC103866354 DExH-box ATP-dependent RNA helicase DExH8 103866354
bra LOC103866374 25S rRNA (cytosine-C(5))-methyltransferase nop2 103866374
bra LOC103866382 ribosomal RNA small subunit methyltransferase 103866382
bra LOC103866501 ribosome biogenesis protein NOP53 103866501 IEA
bra LOC103866705 uncharacterized LOC103866705 103866705 IEA
bra LOC103866760 uncharacterized LOC103866760 103866760
bra LOC103866768 60S ribosomal protein L7-3 103866768
bra LOC103866841 uncharacterized LOC103866841 103866841
bra LOC103866863 ribosome biogenesis protein BOP1 homolog 103866863
bra LOC103867024 probable dual-specificity RNA methyltransferase RlmN 103867024
bra LOC103867060 putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic 103867060
bra LOC103867311 40S ribosomal protein S14-2 103867311
bra LOC103867585 uncharacterized LOC103867585 103867585
bra LOC103867839 protein RRP6-like 3 103867839
bra LOC103868091 RNA cytidine acetyltransferase 1 103868091
bra LOC103868150 NHP2-like protein 1 103868150
bra LOC103868214 U3 small nucleolar RNA-associated protein 14 103868214 IEA
bra LOC103868297 protein RRP6-like 2 103868297
bra LOC103868493 uncharacterized protein At4g26485 103868493
bra LOC103869018 probable rRNA-processing protein EBP2 homolog 103869018 IEA
bra LOC103869034 pre-rRNA-processing protein TSR2 homolog 103869034
bra LOC103869062 multifunctional methyltransferase subunit TRM112 homolog A 103869062
bra LOC103869547 DEAD-box ATP-dependent RNA helicase 51 103869547
bra LOC103869918 ribosome biogenesis protein BRX1 homolog 2 103869918 IEA
bra LOC103869953 uncharacterized exonuclease domain-containing protein At3g15140 103869953
bra LOC103869958 RNA exonuclease 4 103869958 IEA
bra LOC103870001 SART-1 family protein DOT2 103870001
bra LOC103870291 rRNA biogenesis protein RRP5 103870291 IEA
bra LOC103870337 40S ribosomal protein S14-2 103870337
bra LOC103870457 probable U3 small nucleolar RNA-associated protein 7 103870457
bra LOC103870525 DExH-box ATP-dependent RNA helicase DExH10 103870525
bra LOC103870540 60S ribosomal protein L35-1 103870540
bra LOC103870639 exosome complex component RRP42 103870639
bra LOC103870740 uncharacterized protein At3g06530 103870740
bra LOC103870858 WD repeat-containing protein 3 103870858
bra LOC103870906 40S ribosomal protein S7 103870906 IEA
bra LOC103870952 pre-rRNA-processing protein ESF1 103870952 IEA
bra LOC103871023 heavy metal-associated isoprenylated plant protein 41 103871023
bra LOC103871149 uncharacterized protein At4g26485 103871149
bra LOC103871373 ribosomal RNA small subunit methyltransferase E 103871373
bra LOC103871382 pre-rRNA-processing protein TSR1 homolog 103871382
bra LOC103871443 box C/D snoRNA protein 1 103871443
bra LOC103871528 neuroguidin 103871528
bra LOC103871660 chloroplast stem-loop binding protein of 41 kDa b, chloroplastic 103871660 IEA
bra LOC103871744 double-stranded RNA-binding protein 1 103871744 IEA
bra LOC103872151 putative pre-16S rRNA nuclease 103872151
bra LOC103872336 WD repeat-containing protein 43 103872336
bra LOC103872338 periodic tryptophan protein 2 103872338
bra LOC103872527 serine/threonine-protein kinase rio2 103872527
bra LOC103873471 peter Pan-like protein 103873471 IEA
bra LOC103873593 protein DCL homolog, chloroplastic 103873593
bra LOC103873833 40S ribosomal protein S28-2 103873833
bra LOC103874030 DEAD-box ATP-dependent RNA helicase 27 103874030
bra LOC103874375 nuclear nucleic acid-binding protein C1D 103874375
bra LOC103874516 40S ribosomal protein S21-2 103874516
bra LOC103874678 protein EMBRYO DEFECTIVE 514 103874678
bra LOC103874831 pre-rRNA-processing protein TSR2 homolog 103874831
bra LOC103874938 RRP15-like protein 103874938
bra LOC103875138 protein ROOT INITIATION DEFECTIVE 3 103875138 IEA
bra LOC103875150 putative rRNA methyltransferase YlbH 103875150
bra LOC103875174 RNA exonuclease 4 103875174 IEA
bra LOC103875414 40S ribosomal protein S21-2-like 103875414
bra LOC108869700 uncharacterized LOC108869700 108869700
bra LOC117132552 40S ribosomal protein S14-2 117132552
bra LOC117132553 40S ribosomal protein S14-2 117132553
bra LOC117134271 ribosome biogenesis protein BOP1 homolog 117134271


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