GO:0006397 mRNA processing

185 ath genes in this database.
368 gma genes in this database.
211 sly genes in this database.
212 osa genes in this database.
251 zma genes in this database.
329 bra genes in this database.
186 vvi genes in this database.
275 ppo genes in this database.
216 mtr genes in this database.
616 tae genes in this database.
272 hvu genes in this database.
513 ghi genes in this database.
684 bna genes in this database.
143 cre genes in this database.
222 sbi genes in this database.
205 sot genes in this database.
202 cit genes in this database.
225 bdi genes in this database.
391 nta genes in this database.

[QuickGO]

term: mRNA processing
goid: GO:0006397

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Shaded genes do not have GeneChip data. The output was limited up to 10000.
Species Symbol Gene
coexpression		 Locus
page 		Full name* Entrez Gene ID Evidence*
mtr LOC11405190 U1 small nuclear ribonucleoprotein 70 kDa 11405190
mtr LOC11405241 serrate RNA effector molecule 11405241 IEA
mtr LOC11405354 splicing factor U2af large subunit B 11405354 IEA
mtr LOC11405588 serine/threonine-protein kinase fray2 11405588
mtr LOC11406304 zinc finger CCCH domain-containing protein 25 11406304
mtr LOC11406364 protein CWC15 homolog 11406364
mtr LOC11406496 small nuclear ribonucleoprotein E 11406496
mtr LOC11406805 serine/arginine-rich splicing factor SR45 11406805
mtr LOC11406899 E3 ubiquitin ligase PQT3-like 11406899 IEA
mtr LOC11407370 sm-like protein LSM7 11407370
mtr LOC11407458 uncharacterized protein At4g14342 11407458
mtr LOC11408066 septin and tuftelin-interacting protein 1 homolog 2 11408066
mtr LOC11408840 cleavage stimulation factor subunit 77 11408840
mtr LOC11409732 protein BUD31 homolog 2 11409732
mtr LOC11410144 THO complex subunit 2 11410144 IEA
mtr LOC11410596 SRSF protein kinase 1 11410596
mtr LOC11410940 serine/threonine-protein kinase/endoribonuclease IRE1a 11410940 IEA
mtr LOC11411154 cyclin-K 11411154
mtr LOC11411169 probable splicing factor 3A subunit 1 11411169
mtr LOC11411312 E3 ubiquitin ligase PQT3-like 11411312 IEA
mtr LOC11413208 FIP1[III]-like protein 11413208 IEA
mtr LOC11413607 pre-mRNA-splicing factor CWC25 homolog 11413607
mtr LOC11414393 pre-mRNA-splicing factor SPF27 homolog 11414393 IEA
mtr LOC11414620 PHD finger-like domain-containing protein 5A 11414620
mtr LOC11415167 pre-mRNA-splicing factor clf1 11415167
mtr LOC11415940 SNW/SKI-interacting protein 11415940
mtr LOC11416194 uncharacterized protein At4g14342 11416194
mtr LOC11416372 mRNA-capping enzyme 11416372
mtr LOC11417811 coiled-coil domain-containing protein 130 11417811
mtr LOC11417846 polypyrimidine tract-binding protein homolog 3 11417846 IEA
mtr LOC11418483 splicing factor SF3a60 homolog 11418483
mtr LOC11418562 serine/threonine-protein kinase/endoribonuclease IRE1a 11418562 IEA
mtr LOC11419557 cleavage stimulation factor subunit 50 11419557
mtr LOC11420271 sm-like protein LSM6A 11420271
mtr LOC11420807 small nuclear ribonucleoprotein SmD1a 11420807
mtr LOC11421150 zinc finger CCCH domain-containing protein 5 11421150
mtr LOC11421211 thioredoxin-like protein YLS8 11421211
mtr LOC11421219 pre-mRNA-processing-splicing factor 8A 11421219
mtr LOC11421963 SART-1 family protein DOT2 11421963
mtr LOC11422191 regulation of nuclear pre-mRNA domain-containing protein 1B 11422191
mtr LOC11422418 DEAD-box ATP-dependent RNA helicase 35 11422418
mtr LOC11422865 uncharacterized protein At4g14342 11422865
mtr LOC11423131 pre-mRNA-processing factor 17 11423131
mtr LOC11423679 RNA-binding protein 39 11423679 IEA
mtr LOC11424069 E3 ubiquitin ligase PQT3-like 11424069 IEA
mtr LOC11424192 cleavage and polyadenylation specificity factor subunit 3-I 11424192
mtr LOC11424216 splicing factor 3B subunit 1 11424216
mtr LOC11424433 protein PALE CRESS, chloroplastic 11424433
mtr LOC11425048 cactin 11425048
mtr LOC11425250 suppressor of mec-8 and unc-52 protein homolog 1 11425250
mtr LOC11425876 protein suppressor of white apricot 11425876
mtr LOC11425902 pre-mRNA-processing-splicing factor 8A 11425902
mtr LOC11426052 luc7-like protein 11426052
mtr LOC11426059 sm-like protein LSM4 11426059
mtr LOC11426089 WD repeat domain-containing protein 83 11426089
mtr LOC11426099 crooked neck-like protein 1 11426099
mtr LOC11426586 uncharacterized LOC11426586 11426586
mtr LOC11426884 small nuclear ribonucleoprotein SmD3b 11426884
mtr LOC11426905 RNA-binding protein 39 11426905 IEA
mtr LOC11427208 small nuclear ribonucleoprotein E 11427208
mtr LOC11427699 regulation of nuclear pre-mRNA domain-containing protein 1A 11427699
mtr LOC11427783 coilin 11427783
mtr LOC11427918 protein high chlorophyll fluorescent 107 11427918 IEA
mtr LOC11428338 protein RDM16 11428338
mtr LOC11428339 protein CLP1 homolog 11428339
mtr LOC11428365 probable small nuclear ribonucleoprotein F 11428365
mtr LOC11428554 protein MOS2 11428554
mtr LOC11428818 uncharacterized LOC11428818 11428818
mtr LOC11429105 cell division cycle 5-like protein 11429105
mtr LOC11429844 splicing factor U2af large subunit A 11429844 IEA
mtr LOC11429905 cactin 11429905
mtr LOC11430696 sm-like protein LSM4 11430696
mtr LOC11430831 pre-mRNA-processing factor 39 11430831
mtr LOC11430926 E3 ubiquitin ligase PQT3-like 11430926 IEA
mtr LOC11431087 pre-mRNA-processing factor 19 11431087
mtr LOC11431415 splicing factor 3B subunit 6-like protein 11431415
mtr LOC11431976 small nuclear ribonucleoprotein-associated protein B 11431976
mtr LOC11432857 uncharacterized LOC11432857 11432857
mtr LOC11433035 thioredoxin-like protein YLS8 11433035
mtr LOC11433350 protein STABILIZED1 11433350
mtr LOC11433399 chloride conductance regulatory protein ICln 11433399
mtr LOC11433508 lariat debranching enzyme 11433508
mtr LOC11434131 SRSF protein kinase 1 11434131
mtr LOC11434456 U4/U6 small nuclear ribonucleoprotein PRP4-like protein 11434456
mtr LOC11434705 uncharacterized LOC11434705 11434705
mtr LOC11434840 pre-mRNA-splicing factor SYF1 11434840
mtr LOC11434844 splicing factor U2af large subunit A 11434844 IEA
mtr LOC11434991 splicing factor YJU2 11434991
mtr LOC11435146 THO complex subunit 2 11435146 IEA
mtr LOC11435271 uncharacterized LOC11435271 11435271
mtr LOC11435645 uncharacterized LOC11435645 11435645
mtr LOC11435764 U11/U12 small nuclear ribonucleoprotein 65 kDa protein 11435764
mtr LOC11435944 regulation of nuclear pre-mRNA domain-containing protein 1A 11435944
mtr LOC11437138 protein SICKLE 11437138
mtr LOC11437391 pre-mRNA-splicing factor ISY1 homolog 11437391
mtr LOC11437418 transcriptional repressor ILP1 11437418
mtr LOC11437498 cleavage stimulation factor subunit 50 11437498
mtr LOC11437744 U4/U6.U5 tri-snRNP-associated protein 2 11437744 IEA
mtr LOC11437938 pre-mRNA-splicing factor cwc22 11437938
mtr LOC11438189 110 kDa U5 small nuclear ribonucleoprotein component CLO 11438189
mtr LOC11439028 crooked neck-like protein 1 11439028
mtr LOC11439395 protein AAR2 homolog 11439395
mtr LOC11440004 U4/U6 small nuclear ribonucleoprotein Prp31 homolog 11440004
mtr LOC11440579 polypyrimidine tract-binding protein homolog 3 11440579 IEA
mtr LOC11441386 DNA-damage-repair/toleration protein DRT111, chloroplastic 11441386
mtr LOC11441585 G patch domain-containing protein TGH 11441585 IEA
mtr LOC11441608 thioredoxin-like protein YLS8 11441608
mtr LOC11441838 THO complex subunit 7A 11441838 IEA
mtr LOC11442020 sm-like protein LSM2 11442020
mtr LOC11442022 probable small nuclear ribonucleoprotein G 11442022
mtr LOC11442053 mRNA cap guanine-N7 methyltransferase 1 11442053
mtr LOC11442373 U11/U12 small nuclear ribonucleoprotein 35 kDa protein 11442373
mtr LOC11442951 regulation of nuclear pre-mRNA domain-containing protein 1A 11442951
mtr LOC11443469 mRNA cap guanine-N7 methyltransferase 2 11443469
mtr LOC11443480 pre-mRNA-splicing factor cwf22 11443480
mtr LOC11443762 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 11443762
mtr LOC11443981 flowering time control protein FY 11443981
mtr LOC11445329 SRSF protein kinase 1 11445329
mtr LOC11445628 protein pleiotropic regulatory locus 1 11445628
mtr LOC11445730 zinc finger protein ZOP1 11445730
mtr LOC11446023 gem-associated protein 2 11446023
mtr LOC11446185 sm-like protein LSM3A 11446185
mtr LOC11446596 U11/U12 small nuclear ribonucleoprotein 25 kDa protein 11446596
mtr LOC25479448 luc7-like protein 3 25479448
mtr LOC25479578 U4/U6 small nuclear ribonucleoprotein PRP4-like protein 25479578
mtr LOC25480493 nuclear intron maturase 2, mitochondrial 25480493 IEA
mtr LOC25480900 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 25480900 IEA
mtr LOC25482046 pre-mRNA-processing protein 40A 25482046
mtr LOC25482189 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 25482189
mtr LOC25482209 pentatricopeptide repeat-containing protein At2g15820, chloroplastic 25482209
mtr LOC25482250 DEAD-box ATP-dependent RNA helicase 35 25482250
mtr LOC25482516 SART-1 family protein DOT2 25482516
mtr LOC25482853 RNA helicase aquarius 25482853
mtr LOC25483257 cleavage and polyadenylation specificity factor subunit 2 25483257
mtr LOC25483290 uncharacterized LOC25483290 25483290
mtr LOC25483891 uncharacterized LOC25483891 25483891
mtr LOC25484390 splicing factor YJU2 25484390
mtr LOC25484593 splicing factor U2AF-associated protein 2 25484593
mtr LOC25484638 thioredoxin-like protein 4B 25484638
mtr LOC25484718 protein COP1 SUPPRESSOR 2 25484718
mtr LOC25484722 pre-mRNA-splicing factor SLU7-A 25484722
mtr LOC25484788 U1 small nuclear ribonucleoprotein C 25484788
mtr LOC25485016 cleavage stimulating factor 64 25485016
mtr LOC25485080 pre-mRNA cleavage factor Im 25 kDa subunit 2 25485080
mtr LOC25485314 pre-mRNA-processing protein 40A 25485314
mtr LOC25485437 CWF19-like protein 2 homolog 25485437
mtr LOC25485518 serine/threonine-protein kinase prpf4B 25485518
mtr LOC25485884 nuclear intron maturase 2, mitochondrial 25485884 IEA
mtr LOC25485926 heterogeneous nuclear ribonucleoprotein U-like protein 1 25485926
mtr LOC25486300 30-kDa cleavage and polyadenylation specificity factor 30 25486300
mtr LOC25486436 pre-mRNA cleavage factor Im 25 kDa subunit 1 25486436
mtr LOC25486758 serine-threonine kinase receptor-associated protein 25486758
mtr LOC25486837 cleavage stimulation factor subunit 50 25486837
mtr LOC25487079 splicing factor YJU2 25487079
mtr LOC25487481 SRSF protein kinase 3 25487481
mtr LOC25487504 splicing factor U2af small subunit B 25487504
mtr LOC25487697 nuclear cap-binding protein subunit 2 25487697
mtr LOC25488112 protein pleiotropic regulatory locus 1 25488112
mtr LOC25488312 FIP1[V]-like protein 25488312 IEA
mtr LOC25488483 serrate RNA effector molecule 25488483 IEA
mtr LOC25488880 U4/U6 small nuclear ribonucleoprotein PRP4-like protein 25488880
mtr LOC25490373 pre-mRNA-splicing factor CWC22 homolog 25490373
mtr LOC25490917 PHD finger-like domain-containing protein 5A 25490917
mtr LOC25491282 DExH-box ATP-dependent RNA helicase DExH12 25491282
mtr LOC25491383 protein MLN51 homolog 25491383 IEA
mtr LOC25492350 SRSF protein kinase 2 25492350
mtr LOC25492882 U4/U6.U5 tri-snRNP-associated protein 2 25492882 IEA
mtr LOC25493016 sm-like protein LSM8 25493016
mtr LOC25493392 sm-like protein LSM5 25493392
mtr LOC25493639 pre-mRNA-processing factor 17 25493639
mtr LOC25494003 protein BUD31 homolog 2 25494003
mtr LOC25494010 glycine-rich RNA-binding protein 4, mitochondrial 25494010
mtr LOC25494066 crooked neck-like protein 1 25494066
mtr LOC25494236 zinc finger CCCH domain-containing protein 64 25494236
mtr LOC25495070 mRNA cap guanine-N7 methyltransferase 1 25495070
mtr LOC25495091 U2 small nuclear ribonucleoprotein A' 25495091
mtr LOC25495279 polyadenylation and cleavage factor homolog 4 25495279
mtr LOC25496157 polypyrimidine tract-binding protein homolog 3 25496157 IEA
mtr LOC25496613 probable small nuclear ribonucleoprotein G 25496613
mtr LOC25498713 mRNA-capping enzyme 25498713
mtr LOC25498758 protein STABILIZED1 25498758
mtr LOC25499092 sm-like protein LSM2 25499092
mtr LOC25499104 small nuclear ribonucleoprotein SmD1b 25499104
mtr LOC25499124 pre-mRNA-splicing factor 18 25499124
mtr LOC25499261 pre-mRNA-splicing factor SLU7-A 25499261
mtr LOC25499390 splicing factor U2af small subunit B 25499390
mtr LOC25499578 U1 small nuclear ribonucleoprotein C 25499578
mtr LOC25499650 zinc finger matrin-type protein 2 25499650
mtr LOC25499707 cell division cycle 5-like protein 25499707
mtr LOC25500193 splicing factor 3A subunit 2 25500193
mtr LOC25500227 septin and tuftelin-interacting protein 1 homolog 1 25500227
mtr LOC25500254 pre-mRNA-processing-splicing factor 8A 25500254
mtr LOC25500876 BUD13 homolog 25500876
mtr LOC25501029 sm-like protein LSM7 25501029
mtr LOC25501545 SUPPRESSOR OF ABI3-5 25501545
mtr LOC25501710 small nuclear ribonucleoprotein-associated protein B' 25501710
mtr LOC25502435 BUD13 homolog 25502435
mtr LOC112416516 mRNA-capping enzyme 112416516
mtr LOC112416696 crooked neck-like protein 1 112416696
mtr LOC112417170 RNA-binding protein 39 112417170 IEA
mtr LOC112419501 nuclear intron maturase 1, mitochondrial 112419501 IEA
mtr LOC112419897 nuclear intron maturase 4, mitochondrial 112419897
mtr LOC112420380 U11/U12 small nuclear ribonucleoprotein 31 kDa protein 112420380
mtr LOC112421304 nuclear intron maturase 3, mitochondrial 112421304
mtr LOC112421393 protein RDM16 112421393
mtr LOC112422184 uncharacterized LOC112422184 112422184
mtr LOC112422573 uncharacterized LOC112422573 112422573
mtr LOC112422675 uncharacterized LOC112422675 112422675
mtr LOC112422855 nuclear intron maturase 3, mitochondrial 112422855
mtr LOC120575992 maturase K-like 120575992 IEA
mtr LOC120576919 uncharacterized LOC120576919 120576919
mtr LOC120577112 thioredoxin-like protein 4B 120577112
mtr LOC120577398 pre-mRNA-processing-splicing factor 8A-like 120577398
mtr LOC120578017 pre-mRNA-splicing factor syf1 120578017
mtr LOC120579655 maturase K 120579655 IEA
mtr LOC120580880 probable cyclic nucleotide-gated ion channel 20, chloroplastic 120580880


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