GO:0016071 mRNA metabolic process

268 ath genes in this database.
536 gma genes in this database.
310 sly genes in this database.
299 osa genes in this database.
390 zma genes in this database.
498 bra genes in this database.
275 vvi genes in this database.
399 ppo genes in this database.
330 mtr genes in this database.
911 tae genes in this database.
366 hvu genes in this database.
769 ghi genes in this database.
1033 bna genes in this database.
205 cre genes in this database.
317 sbi genes in this database.
317 sot genes in this database.
280 cit genes in this database.
322 bdi genes in this database.
594 nta genes in this database.

[QuickGO]

term: mRNA metabolic process
goid: GO:0016071

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Shaded genes do not have GeneChip data. The output was limited up to 10000.
Species Symbol Gene
coexpression		 Locus
page 		Full name* Entrez Gene ID Evidence*
cit LOC102577999 probable NOT transcription complex subunit VIP2 102577999
cit LOC102606613 hypothetical protein 102606613
cit LOC102606622 cleavage and polyadenylation specificity factor subunit 3-I 102606622
cit LOC102606665 serine/arginine-rich splicing factor RSZ21 102606665
cit LOC102606810 uncharacterized LOC102606810 102606810
cit LOC102606884 SNW/SKI-interacting protein 102606884
cit LOC102606969 serine/arginine-rich splicing factor RSZ22 102606969
cit LOC102607121 multiple organellar RNA editing factor 1, mitochondrial-like 102607121
cit LOC102607308 uncharacterized LOC102607308 102607308
cit LOC102607317 nuclear intron maturase 3, mitochondrial 102607317
cit LOC102607318 nonsense-mediated mRNA decay factor SMG7 102607318
cit LOC102607561 U4/U6 small nuclear ribonucleoprotein Prp31 homolog 102607561
cit LOC102607563 septin and tuftelin-interacting protein 1 homolog 1 102607563
cit LOC102607594 pre-mRNA-processing factor 39-2 102607594
cit LOC102607630 uncharacterized LOC102607630 102607630
cit LOC102607665 uncharacterized LOC102607665 102607665
cit LOC102608089 pre-mRNA-splicing factor SPF27 homolog 102608089
cit LOC102608140 uncharacterized LOC102608140 102608140
cit LOC102608178 uncharacterized LOC102608178 102608178
cit LOC102608207 zinc finger CCCH domain-containing protein 16-like 102608207
cit LOC102608573 H/ACA ribonucleoprotein complex subunit 4 102608573
cit LOC102608683 protein RRP6-like 3 102608683
cit LOC102608898 sm-like protein LSM1A 102608898
cit LOC102609013 zinc finger protein ZOP1 102609013
cit LOC102609201 protein RRP6-like 2 102609201
cit LOC102609240 uncharacterized LOC102609240 102609240
cit LOC102609244 splicing factor U2af large subunit A 102609244
cit LOC102609283 probable small nuclear ribonucleoprotein F 102609283
cit LOC102609391 exosome complex exonuclease RRP46 homolog 102609391
cit LOC102609579 mRNA-decapping enzyme-like protein 102609579
cit LOC102609625 serine/arginine-rich splicing factor RS31 102609625
cit LOC102609677 RNA-binding motif protein 25 102609677
cit LOC102609768 uncharacterized LOC102609768 102609768
cit LOC102609790 uncharacterized LOC102609790 102609790
cit LOC102610236 sm-like protein LSM8 102610236
cit LOC102610331 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6-like 102610331
cit LOC102610349 cell differentiation protein rcd1-like 102610349
cit LOC102610368 5'-3' exoribonuclease 4 102610368
cit LOC102610385 uncharacterized LOC102610385 102610385
cit LOC102610389 uncharacterized LOC102610389 102610389
cit LOC102610476 zinc finger CCCH domain-containing protein 64 102610476
cit LOC102610484 agamous-like MADS-box protein AGL11 102610484
cit LOC102610491 U1 small nuclear ribonucleoprotein A 102610491
cit LOC102610531 uncharacterized LOC102610531 102610531
cit LOC102610569 ATP-dependent RNA helicase DEAH11, chloroplastic-like 102610569
cit LOC102610602 uncharacterized LOC102610602 102610602
cit LOC102610618 serine/arginine-rich splicing factor RS2Z33-like 102610618
cit LOC102610630 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1 102610630
cit LOC102610763 zinc finger CCCH domain-containing protein 5 102610763
cit LOC102610862 splicing factor U2AF-associated protein 2 102610862
cit LOC102610927 uncharacterized LOC102610927 102610927
cit LOC102611390 uncharacterized LOC102611390 102611390
cit LOC102611423 protein pleiotropic regulatory locus 1 102611423
cit LOC102611441 uncharacterized LOC102611441 102611441
cit LOC102611484 protein PAT1 homolog 102611484
cit LOC102611505 uncharacterized LOC102611505 102611505
cit LOC102611778 uncharacterized LOC102611778 102611778
cit LOC102611813 cell division cycle 5-like protein 102611813
cit LOC102611874 uncharacterized LOC102611874 102611874
cit LOC102611919 hypothetical protein 102611919
cit LOC102612008 serine/threonine-protein kinase/endoribonuclease IRE1a 102612008
cit LOC102612069 pentatricopeptide repeat-containing protein At2g15820, chloroplastic 102612069
cit LOC102612141 sm-like protein LSM3B 102612141
cit LOC102612277 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like 102612277
cit LOC102612523 transcription elongation factor SPT4 homolog 2 102612523
cit LOC102612583 uncharacterized LOC102612583 102612583
cit LOC102612593 protein MLN51 homolog 102612593
cit LOC102612717 THO complex subunit 2 102612717
cit LOC102612824 transcriptional repressor ILP1 102612824
cit LOC102612885 DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 102612885
cit LOC102613079 serine/arginine-rich splicing factor SR45-like 102613079
cit LOC102613242 SART-1 family protein DOT2 102613242
cit LOC102613279 general negative regulator of transcription subunit 3 102613279
cit LOC102613308 uncharacterized LOC102613308 102613308
cit LOC102613430 protein BUD31 homolog 2 102613430
cit LOC102613606 uncharacterized LOC102613606 102613606
cit LOC102613621 exosome complex component RRP45A 102613621
cit LOC102613630 probable U6 snRNA-associated Sm-like protein LSm4 102613630
cit LOC102613662 uncharacterized LOC102613662 102613662
cit LOC102613701 serine/arginine-rich SC35-like splicing factor SCL33 102613701
cit LOC102613848 E3 ubiquitin ligase PQT3-like 102613848
cit LOC102613927 protein BUD31 homolog 2 102613927
cit LOC102614033 uncharacterized LOC102614033 102614033
cit LOC102614062 cactin 102614062
cit LOC102614182 multiple organellar RNA editing factor 8, chloroplastic/mitochondrial 102614182
cit LOC102614343 uncharacterized LOC102614343 102614343
cit LOC102614365 uncharacterized LOC102614365 102614365
cit LOC102614394 multiple organellar RNA editing factor 2, chloroplastic 102614394
cit LOC102614429 small nuclear ribonucleoprotein SmD3b 102614429
cit LOC102614437 suppressor of mec-8 and unc-52 protein homolog 2 102614437
cit LOC102614451 pre-mRNA-processing factor 39-1 102614451
cit LOC102614642 mRNA-decapping enzyme-like protein 102614642
cit LOC102614658 protein RDM16 102614658
cit LOC102614661 uncharacterized LOC102614661 102614661
cit LOC102615034 organelle RRM domain-containing protein 6, chloroplastic 102615034
cit LOC102615147 uncharacterized LOC102615147 102615147
cit LOC102615226 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like 102615226
cit LOC102615299 sm-like protein LSM36B 102615299
cit LOC102615436 regulator of nonsense transcripts 1 homolog 102615436
cit LOC102615488 110 kDa U5 small nuclear ribonucleoprotein component CLO 102615488
cit LOC102615618 splicing factor U2af small subunit B 102615618
cit LOC102615651 nuclear intron maturase 1, mitochondrial 102615651
cit LOC102615682 carbon catabolite repressor protein 4 homolog 1 102615682
cit LOC102615699 cleavage stimulating factor 64 102615699
cit LOC102615727 polyribonucleotide nucleotidyltransferase 1, chloroplastic 102615727
cit LOC102615743 nuclear intron maturase 2, mitochondrial 102615743
cit LOC102615861 uncharacterized LOC102615861 102615861
cit LOC102615935 septin and tuftelin-interacting protein 1 homolog 2-like 102615935
cit LOC102615951 zinc finger CCCH domain-containing protein 42 102615951
cit LOC102616006 uncharacterized LOC102616006 102616006
cit LOC102616163 hypothetical protein 102616163
cit LOC102616211 uncharacterized LOC102616211 102616211
cit LOC102616318 splicing factor U2af small subunit B-like 102616318
cit LOC102616360 U4/U6 small nuclear ribonucleoprotein PRP4-like protein 102616360
cit LOC102616474 protein SICKLE 102616474
cit LOC102616588 regulator of nonsense transcripts UPF3 102616588
cit LOC102616591 pre-mRNA-splicing factor SLU7-A 102616591
cit LOC102616738 cleavage and polyadenylation specificity factor subunit 2 102616738
cit LOC102616755 protein PELOTA 1-like 102616755
cit LOC102616760 uncharacterized LOC102616760 102616760
cit LOC102616828 RNA demethylase ALKBH9B 102616828
cit LOC102617043 hypothetical protein 102617043
cit LOC102617109 ribonuclease TUDOR 1 102617109
cit LOC102617205 probable small nuclear ribonucleoprotein G 102617205
cit LOC102617256 protein PELOTA 1 102617256
cit LOC102617412 regulator of nonsense transcripts UPF2 102617412
cit LOC102617436 splicing factor SF3a60 homolog 102617436
cit LOC102617483 uncharacterized LOC102617483 102617483
cit LOC102617595 U11/U12 small nuclear ribonucleoprotein 31 kDa protein 102617595
cit LOC102617640 uncharacterized LOC102617640 102617640
cit LOC102617712 sm-like protein LSM1B 102617712
cit LOC102618037 uncharacterized LOC102618037 102618037
cit LOC102618153 protein PAT1 homolog 1-like 102618153
cit LOC102618278 splicing factor U2af large subunit B 102618278
cit LOC102618357 cleavage stimulation factor subunit 50 102618357
cit LOC102618425 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 102618425
cit LOC102618482 protein STABILIZED1 102618482
cit LOC102618809 uncharacterized LOC102618809 102618809
cit LOC102618872 RNA demethylase ALKBH10B 102618872
cit LOC102619030 spliceosome-associated protein 130 A 102619030
cit LOC102619037 uncharacterized LOC102619037 102619037
cit LOC102619096 uncharacterized LOC102619096 102619096
cit LOC102619264 serine/arginine-rich splicing factor RS40 102619264
cit LOC102619436 U2 small nuclear ribonucleoprotein A' 102619436
cit LOC102619626 uncharacterized LOC102619626 102619626
cit LOC102619642 protein high chlorophyll fluorescent 107 102619642
cit LOC102619652 chloride conductance regulatory protein ICln 102619652
cit LOC102619708 uncharacterized LOC102619708 102619708
cit LOC102619720 SNW/SKI-interacting protein A-like 102619720
cit LOC102619756 probable splicing factor 3A subunit 1 102619756
cit LOC102619789 uncharacterized LOC102619789 102619789
cit LOC102619907 uncharacterized LOC102619907 102619907
cit LOC102619912 zinc finger CCCH domain-containing protein 5-like 102619912
cit LOC102619914 uncharacterized LOC102619914 102619914
cit LOC102619923 pre-mRNA-processing-splicing factor 8A 102619923
cit LOC102620183 coilin 102620183
cit LOC102620269 uncharacterized LOC102620269 102620269
cit LOC102620348 uncharacterized LOC102620348 102620348
cit LOC102620539 polypyrimidine tract-binding protein homolog 3 102620539
cit LOC102620640 hypothetical protein 102620640
cit LOC102620650 uncharacterized LOC102620650 102620650
cit LOC102620834 ribonuclease II, chloroplastic/mitochondrial 102620834
cit LOC102620843 organelle RRM domain-containing protein 1, chloroplastic 102620843
cit LOC102620919 probable U6 snRNA-associated Sm-like protein LSm4 102620919
cit LOC102620951 exosome complex component RRP41-like 102620951
cit LOC102620970 zinc finger CCCH domain-containing protein 5-like 102620970
cit LOC102621015 small nuclear ribonucleoprotein SmD1a 102621015
cit LOC102621058 nonsense-mediated mRNA decay factor SMG7-like 102621058
cit LOC102621252 nuclear cap-binding protein subunit 2 102621252
cit LOC102621258 uncharacterized LOC102621258 102621258
cit LOC102621370 DNA-directed RNA polymerase II subunit 4 102621370
cit LOC102621404 transcription elongation factor SPT6 homolog 102621404
cit LOC102621668 mRNA cap guanine-N7 methyltransferase 1 102621668
cit LOC102621915 U2 small nuclear ribonucleoprotein B'' 2 102621915
cit LOC102622275 exosome complex component RRP41 homolog 102622275
cit LOC102622302 pre-mRNA-processing protein 40A-like 102622302
cit LOC102622361 NAD-capped RNA hydrolase DXO1 102622361
cit LOC102622363 uncharacterized LOC102622363 102622363
cit LOC102622406 U1 small nuclear ribonucleoprotein 70 kDa 102622406
cit LOC102622483 mRNA-decapping enzyme subunit 2 102622483
cit LOC102622499 uncharacterized LOC102622499 102622499
cit LOC102622555 organelle RRM domain-containing protein 2, mitochondrial 102622555
cit LOC102622566 E3 ubiquitin ligase PQT3-like 102622566
cit LOC102622876 uncharacterized LOC102622876 102622876
cit LOC102623051 5'-3' exoribonuclease 3 102623051
cit LOC102623193 nuclear intron maturase 4, mitochondrial-like 102623193
cit LOC102623196 pre-mRNA-processing protein 40A-like 102623196
cit LOC102623674 multiple organellar RNA editing factor 7, mitochondrial 102623674
cit LOC102623698 uncharacterized LOC102623698 102623698
cit LOC102623901 septin and tuftelin-interacting protein 1 homolog 1-like 102623901
cit LOC102624033 U1 small nuclear ribonucleoprotein C 102624033
cit LOC102624141 uncharacterized LOC102624141 102624141
cit LOC102624504 THO complex subunit 7B 102624504
cit LOC102624586 G patch domain-containing protein TGH 102624586
cit LOC102624632 ubiquitin-like protein 5 102624632
cit LOC102624787 uncharacterized LOC102624787 102624787
cit LOC102624825 uncharacterized LOC102624825 102624825
cit LOC102624831 organelle RRM domain-containing protein 1, chloroplastic 102624831
cit LOC102624901 sm-like protein LSM7 102624901
cit LOC102625038 regulator of nonsense transcripts UPF3-like 102625038
cit LOC102625053 U11/U12 small nuclear ribonucleoprotein 25 kDa protein 102625053
cit LOC102625079 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 102625079
cit LOC102625092 serine/arginine-rich SC35-like splicing factor SCL30 102625092
cit LOC102625105 enhancer of mRNA-decapping protein 4-like 102625105
cit LOC102625111 putative tRNA pseudouridine synthase 102625111
cit LOC102625364 SUPPRESSOR OF ABI3-5 102625364
cit LOC102625582 DEAD-box ATP-dependent RNA helicase 35 102625582
cit LOC102625613 13 kDa ribonucleoprotein-associated protein 102625613
cit LOC102626088 uncharacterized LOC102626088 102626088
cit LOC102626112 serine/arginine-rich SC35-like splicing factor SCL33 102626112
cit LOC102626118 U11/U12 small nuclear ribonucleoprotein 25 kDa protein 102626118
cit LOC102626183 serine/threonine-protein kinase/endoribonuclease IRE1b 102626183
cit LOC102626231 nuclear intron maturase 4, mitochondrial-like 102626231
cit LOC102626268 serrate RNA effector molecule 102626268
cit LOC102626500 exosome complex component RRP45A-like 102626500
cit LOC102626596 protein MLN51 homolog 102626596
cit LOC102626653 uncharacterized protein At4g14342 102626653
cit LOC102626739 organelle RRM domain-containing protein 2, mitochondrial 102626739
cit LOC102626806 uncharacterized LOC102626806 102626806
cit LOC102626893 protein PALE CRESS, chloroplastic 102626893
cit LOC102626935 uncharacterized LOC102626935 102626935
cit LOC102626984 protein EARLY FLOWERING 5 102626984
cit LOC102627004 lariat debranching enzyme 102627004
cit LOC102627330 splicing factor 3B subunit 6-like protein 102627330
cit LOC102627416 uncharacterized LOC102627416 102627416
cit LOC102627543 FIP1[V]-like protein 102627543
cit LOC102627562 sm-like protein LSM5 102627562
cit LOC102627702 PHD finger-like domain-containing protein 5A 102627702
cit LOC102627758 uncharacterized LOC102627758 102627758
cit LOC102627798 hypothetical protein 102627798
cit LOC102627854 pre-mRNA-processing factor 19-like 102627854
cit LOC102627969 mRNA cap guanine-N7 methyltransferase 2 102627969
cit LOC102628156 uncharacterized LOC102628156 102628156
cit LOC102628288 multiple organellar RNA editing factor 3, mitochondrial 102628288
cit LOC102628291 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 102628291
cit LOC102628356 uncharacterized LOC102628356 102628356
cit LOC102628439 sm-like protein LSM2 102628439
cit LOC102628495 uncharacterized LOC102628495 102628495
cit LOC102628557 uncharacterized LOC102628557 102628557
cit LOC102628566 uncharacterized LOC102628566 102628566
cit LOC102628771 DEAD-box ATP-dependent RNA helicase 21 102628771
cit LOC102628795 polyribonucleotide nucleotidyltransferase 2, mitochondrial 102628795
cit LOC102628799 nuclear cap-binding protein subunit 1 102628799
cit LOC102628811 DEAD-box ATP-dependent RNA helicase 42-like 102628811
cit LOC102629136 30-kDa cleavage and polyadenylation specificity factor 30 102629136
cit LOC102629476 U11/U12 small nuclear ribonucleoprotein 65 kDa protein 102629476
cit LOC102629532 uncharacterized LOC102629532 102629532
cit LOC102629583 uncharacterized LOC102629583 102629583
cit LOC102629682 cleavage stimulation factor subunit 77 102629682
cit LOC102629695 thioredoxin-like protein YLS8 102629695
cit LOC102629709 uncharacterized LOC102629709 102629709
cit LOC102630036 U11/U12 small nuclear ribonucleoprotein 35 kDa protein 102630036
cit LOC102630212 RNA demethylase ALKBH9B-like 102630212
cit LOC102630388 DExH-box ATP-dependent RNA helicase DExH11 102630388
cit LOC102630435 suppressor of mec-8 and unc-52 protein homolog 1 102630435
cit LOC102630495 pre-mRNA-processing factor 19 homolog 2 102630495
cit LOC102630721 protein MOS2 102630721
cit LOC102630807 uncharacterized LOC102630807 102630807
cit LOC102630810 uncharacterized LOC102630810 102630810
cit LOC102630812 uncharacterized LOC102630812 102630812
cit LOC102630970 uncharacterized LOC102630970 102630970
cit LOC102631022 cleavage and polyadenylation specificity factor subunit 3-I-like 102631022
cit LOC102631062 hypothetical protein 102631062
cit LOC102631146 splicing factor U2af small subunit B-like 102631146
cit LOC102631233 enhancer of mRNA-decapping protein 4-like 102631233
cit LOC102631272 uncharacterized LOC102631272 102631272
cit LOC102631410 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 102631410
cit LOC102631423 DNA-damage-repair/toleration protein DRT111, chloroplastic 102631423
cit LOC107174341 septin and tuftelin-interacting protein 1 homolog 1-like 107174341
cit LOC107175764 U4/U6 small nuclear ribonucleoprotein Prp31 homolog 107175764
cit LOC107176716 uncharacterized LOC107176716 107176716
cit LOC107177484 mRNA-decapping enzyme-like protein 107177484
cit LOC112497546 multiple organellar RNA editing factor 1, mitochondrial-like 112497546
cit LOC127898598 serine/arginine-rich splicing factor RS31-like 127898598
cit LOC127899323 zinc finger CCCH domain-containing protein 5-like 127899323
cit LOC127899997 uncharacterized LOC127899997 127899997
cit LOC127900418 zinc finger CCCH domain-containing protein 16-like 127900418
cit LOC127902132 uncharacterized LOC127902132 127902132
cit LOC127902388 protein STABILIZED1-like 127902388
cit LOC127903706 uncharacterized LOC127903706 127903706


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