cis; ACATGCA


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
 CATGCA RYREPEATBNNAPA [ref] [ref]

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of ACATGCA

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of ACATGCA.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.60At1g69570Dof-type zinc finger domain-containing protein C2C2-Dof
-0.56At4g3093050S ribosomal protein L21, mitochondrial (RPL21M) ((WRKY32)) WRKY
0.52At3g15510no apical meristem (NAM) family protein (NAC2) ((ATNAC2)) NAC
0.50At1g50600scarecrow-like transcription factor 5 (SCL5) GRAS
0.49At5g55970zinc finger (C3HC4-type RING finger) family protein C3H
0.49At5g39660Dof-type zinc finger domain-containing protein C2C2-Dof
-0.49At3g57150dyskerin, putative / nucleolar protein NAP57, putative ((NAP57)) NAC
0.48At3g52800zinc finger (AN1-like) family protein C2H2
0.47At5g47390myb family transcription factor MYB-related
0.47At3g19580zinc finger (C2H2 type) protein 2 (AZF2) ((AZF2)) C2H2
-0.47At3g16870zinc finger (GATA type) family protein C2C2-Gata
0.46At4g37790homeobox-leucine zipper protein 22 (HAT22) / HD-ZIP protein 22 ((HAT22)) Homeobox
0.46At5g15850zinc finger protein CONSTANS-LIKE 1 (COL1) ((COL1)) C2C2-CO-like
-0.46At1g71260expressed protein WHIRLY
-0.46At5g16070chaperonin, putative TCP

link to other 304 cis elements in ATTED

similar seq.
ACATGCA
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TGCATGT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
ACATGCA1.000.0641
ATCCACA0.810.0653
TTATCCA0.760.1054
ACCCCAC0.710.0672
CTTATCT0.700.0821
GGATAAG0.700.0689
CTTATCC0.690.1153
AGCCACA0.690.0653
CCACACG0.690.0638
CCACACA0.680.0753