GO:0008380 RNA splicing

191 ath genes in this database.
1 osa genes in this database.

[QuickGO]

term: RNA splicing
goid: GO:0008380

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Shaded genes do not have GeneChip data. The output was limited up to 10000.
Species Symbol Gene
coexpression		 Locus
page 		Full name* Entrez Gene ID Evidence*
ath ABH1 ARM repeat superfamily protein 815840
ath OTP51 endonuclease 816078
ath IRE1A Endoribonuclease/protein kinase IRE1-like protein 816258 IMP
ath AT2G18740 Small nuclear ribonucleoprotein family protein 816389 IMP
ath CAF1 RNA-binding CRS1 / YhbY (CRM) domain-containing protein 816521
ath GRP7 cold, circadian rhythm, and rna binding 2 816705
ath SNRNP-G Putative small nuclear ribonucleoprotein G 816925
ath RSZ22a RNA recognition motif and CCHC-type zinc finger domains containing protein 816995 NAS
ath SMU2 RED family protein 817187 IMP
ath SE C2H2 zinc-finger protein SERRATE (SE) 817252 IMP
ath AT2G29210 splicing factor PWI domain-containing protein 817470 NAS
ath U2B'' U2 small nuclear ribonucleoprotein B 817576
ath MAC3B MOS4-associated complex 3B 817897
ath AT2G33730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 817938
ath RS2Z33 arginine/serine-rich zinc knuckle-containing protein 33 818311 NAS
ath EMB2765 P-loop containing nucleoside triphosphate hydrolases superfamily protein 818459
ath WTF9 Ubiquitin carboxyl-terminal hydrolase family protein 818498
ath SAC3A SAC3/GANP/Nin1/mts3/eIF-3 p25 family 818519 IMP
ath AT2G40650 PRP38 family protein 818660 IEA
ath LIS WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-like protein 818748
ath EMB2654 Tetratricopeptide repeat (TPR)-like superfamily protein 818771 IMP
ath AT2G43770 Transducin/WD40 repeat-like superfamily protein 818980 IEA
ath AT2G43960 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 819001
ath U1A spliceosomal protein U1A 819371
ath AT3G05760 C2H2 and C2HC zinc fingers superfamily protein 819745
ath AT3G06980 DEA(D/H)-box RNA helicase family protein 819883 IEA
ath AT3G07860 Ubiquitin-like superfamily protein 819977
ath U11/U12-31K RNA recognition motif and CCHC-type zinc finger domains containing protein 820203
ath SCL30A SC35-like splicing factor 30A 820559 NAS
ath AT3G02490 Pentatricopeptide repeat (PPR) superfamily protein 820563 IEA
ath AT3G16010 Pentatricopeptide repeat (PPR-like) superfamily protein 820846
ath RFC3 Translation elongation factor EF1B/ribosomal protein S6 family protein 820974 IMP
ath AT3G02710 ARM repeat superfamily protein 821269 ISS
ath UNE6 LUC7 related protein 821276
ath CFM2 CRM family member 2 821288
ath PRP40B pre-mRNA-processing protein 40B 821504 IDA
ath PRP40C pre-mRNA-processing protein 40C 821521 IDA
ath AT3G21215 RNA-binding (RRM/RBD/RNP motifs) family protein 821675 IEA
ath PMH2 putative mitochondrial RNA helicase 2 821802
ath CFM3A CRM family member 3A 821881
ath HSP60 heat shock protein 60 821983
ath AT3G24730 mRNA splicing factor, thioredoxin-like U5 snRNP 822071
ath AT3G25840 Protein kinase superfamily protein 822178 IMP
ath AT3G26020 Protein phosphatase 2A regulatory B subunit family protein 822199
ath AT3G27550 RNA-binding CRS1 / YhbY (CRM) domain protein 822377
ath AT3G27600 SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein 822382
ath EMB3123 PPR containing protein 822397
ath AT3G45180 Ubiquitin-like superfamily protein 823654 IMP
ath AT3G48120 serine/arginine-rich splicing factor 823967
ath ATM Serine/Threonine-kinase ATM-like protein 823975 IMP
ath BIR6 Pentatricopeptide repeat (PPR) superfamily protein 823983 IMP
ath AT3G48810 Pentatricopeptide repeat (PPR) superfamily protein 824042 IMP
ath AT3G49130 SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein 824074
ath SR34a SER/ARG-rich protein 34A 824105 NAS
ath U1-70K U1 small nuclear ribonucleoprotein-70K 824230
ath AT3G52250 Duplicated homeodomain-like superfamily protein 824390 ISS
ath CP29 chloroplast RNA-binding protein 29 824514 IMP
ath RS2Z32 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein 824518 NAS
ath SUA suppressor of abi3-5 824590
ath SCL30 SC35-like splicing factor 30 824712 NAS
ath AT3G56790 RNA splicing factor-like protein 824846
ath AT3G61360 Tetratricopeptide repeat (TPR)-like superfamily protein 825308
ath RS31 RNA-binding (RRM/RBD/RNP motifs) family protein 825359 NAS
ath AT3G62310 RNA helicase family protein 825404 IEA
ath AT3G63400 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 825515 NAS
ath CFM3B CRM family member 3B 827098 IMP
ath AT4G16200 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 827313
ath AT4G18520 Pentatricopeptide repeat (PPR) superfamily protein 827584 IMP
ath AT4G18930 RNA ligase/cyclic nucleotide phosphodiesterase family protein 827628
ath smB small nuclear ribonucleoprotein associated protein B 827792
ath EMB2770 pre-mRNA splicing factor-like protein 827925
ath BSM Mitochondrial transcription termination factor family protein 828116 IMP
ath AT4G02840 Small nuclear ribonucleoprotein family protein 828163 IMP
ath AT4G02820 Pentatricopeptide repeat (PPR) superfamily protein 828169 IMP
ath AT4G22350 Ubiquitin C-terminal hydrolases superfamily protein 828330
ath AT4G22410 U4/U6.U5 tri-snRNP-associated-like protein 828336
ath SIC hydroxyproline-rich glycoprotein family protein 828552
ath OTP70 Tetratricopeptide repeat (TPR)-like superfamily protein 828630 IMP
ath RS40 arginine/serine-rich splicing factor 35 828654 NAS
ath PIRL8 plant intracellular ras group-related LRR 8 828711
ath RUXF small nuclear ribonucleoprotein F 829145
ath AT4G31010 RNA-binding CRS1 / YhbY (CRM) domain-containing protein 829228
ath RSZ22 serine/arginine-rich 22 829285 NAS
ath AT4G32270 Ubiquitin-like superfamily protein 829360
ath NRPB1 RNA polymerase II large subunit 829734 IEA
ath ATU2AF65A U2 snRNP auxilliary factor, large subunit, splicing factor 829822
ath SMP2 Pre-mRNA splicing Prp18-interacting factor 829866 TAS
ath BGAL14 beta-galactosidase 14 830016
ath CCR1 cold, circadian rhythm, and RNA binding 1 830082
ath AT5G04050 RNA-directed DNA polymerase (reverse transcriptase) 830284 IMP
ath BTR1L binding to TOMV RNA 1L (long form) 830322 NAS
ath AT5G04810 pentatricopeptide (PPR) repeat-containing protein 830360 IMP,IPI
ath AT5G06520 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 830540
ath AT5G06890 Ubiquitin-like superfamily protein 830579
ath YLS8 mRNA splicing factor, thioredoxin-like U5 snRNP 830725
ath ILP1 GC-rich sequence DNA-binding factor-like protein 830755
ath AT5G09210 GC-rich sequence DNA-binding factor-like protein 830780
ath AT5G12280 SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein 831103
ath EMB3011 RNA helicase family protein 831141 IMP
ath AT5G15980 Pentatricopeptide repeat (PPR) superfamily protein 831455 IEA
ath CRS1 maize chloroplast splicing factor-like protein 831476
ath ELF9 RNA binding (RRM/RBD/RNP motifs) family protein 831486
ath SCL28 SC35-like splicing factor 28 831999
ath AT5G19350 RNA-binding (RRM/RBD/RNP motifs) family protein 832055
ath IRE1-1 inositol requiring 1-1 832507 IMP
ath RRC1 RNA recognition motif (RRM)-containing protein 832577 IEA
ath AT5G25340 Ubiquitin-like superfamily protein 832606
ath emb1138 DEAD box RNA helicase (RH3) 832713
ath EMB976 Tetratricopeptide repeat (TPR)-like superfamily protein 832785
ath UBL5 ubiquitin-like protein 5 834235 IMP
ath CBP20 CAP-binding protein 20 834443
ath AT5G44500 Small nuclear ribonucleoprotein family protein 834477 IEA
ath AT5G46920 Intron maturase, type II family protein 834738
ath LBA1 RNA helicase 834747 IMP
ath AT5G51300 splicing factor-like protein 835204 IEP,IMP,NAS
ath RS41 RNA-binding (RRM/RBD/RNP motifs) family protein 835279 NAS
ath AT5G54890 RNA-binding CRS1 / YhbY (CRM) domain-containing protein 835580
ath AT5G58020 RTF2 RING-finger protein 835914
ath SEN2 splicing endonuclease 2 836145
ath RUG3 Regulator of chromosome condensation (RCC1) family protein 836208 IMP,IMP
ath AT5G62290 nucleotide-sensitive chloride conductance regulator (ICln) family protein 836350
ath AT5G63370 Protein kinase superfamily protein 836456
ath SC35 serine/arginine-rich splicing factor-like protein, putative 836541 NAS
ath AT1G06790 RNA polymerase Rpb7 N-terminal domain-containing protein 837190 IMP
ath AT1G07170 PHF5-like protein 837228
ath SR45a RNA-binding (RRM/RBD/RNP motifs) family protein 837246 NAS
ath RNL RNAligase 837306
ath AT1G09230 RNA-binding (RRM/RBD/RNP motifs) family protein 837443
ath U2A' U2 small nuclear ribonucleoprotein A 837505
ath AT1G14640 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 838026
ath AT1G14650 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 838027
ath SR45 arginine/serine-rich 45 838230 NAS
ath STIPL1 GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain-containing protein 838277
ath AT1G17130 coiled-coil protein (DUF572) 838283 IMP
ath AT1G18050 SWAP/surp RNA-binding domain protein 838385
ath AT1G19290 Pentatricopeptide repeat (PPR) superfamily protein 838511 IMP
ath AT1G20580 Small nuclear ribonucleoprotein family protein 838647
ath CAF2 RNA-binding CRS1 / YhbY (CRM) domain-containing protein 838948
ath RSZ21 RS-containing zinc finger protein 21 838997
ath AT1G25682 coiled-coil protein (DUF572) 839146
ath AT1G25988 coiled-coil protein, putative (DUF572) 839149
ath AT1G01940 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 839309
ath MAC3A MOS4-associated complex 3A 839503
ath AT1G03140 splicing factor Prp18 family protein 839567
ath AT1G29220 transcriptional regulator family protein 839796 IEA
ath nMAT1 Intron maturase, type II family protein 839880
ath DRT111 D111/G-patch domain-containing protein 839927
ath AT1G31870 pre-mRNA-splicing factor of RES complex protein 840077
ath ESP3 RNA helicase family protein 840143 IMP,NAS
ath PRP40A pre-mRNA-processing protein 40A 841057 IDA
ath AT1G49590 C2H2 and C2HC zinc fingers superfamily protein 841383 IMP
ath TAF15 TBP-associated factor 15 841452
ath ABO5 ABA Overly-Sensitive 5 841625 IMP
ath AT1G52620 Pentatricopeptide repeat (PPR) superfamily protein 841694 IDA
ath AT1G54380 spliceosome protein-like protein 841879
ath SCL33 SC35-like splicing factor 33 841976 NAS
ath emb1220 pre-mRNA processing ribonucleoprotein binding region-containing protein 842312 IMP
ath AT1G60900 U2 snRNP auxilliary factor, large subunit, splicing factor 842382
ath APO1 APO RNA-binding protein (DUF794) 842789
ath SMP1 Pre-mRNA splicing Prp18-interacting factor 842877 TAS
ath AT1G66345 Pentatricopeptide repeat (PPR) superfamily protein 842952
ath EMB25 DEAD/DEAH box helicase 843343
ath AT1G70400 NOSIC domain protein 843376
ath RAD52-1 cobalt ion binding protein 843472
ath SMU1 transducin family protein / WD-40 repeat family protein 843707 IMP
ath AT1G74120 Mitochondrial transcription termination factor family protein 843752
ath AT1G74350 Intron maturase, type II family protein 843776
ath OTP43 Pentatricopeptide repeat (PPR) superfamily protein 843829 IGI
ath SmD3 snRNP core protein SMD3 843963
ath SKIP chromatin protein family 844055 IMP,ISS
ath AT1G80060 Ubiquitin-like superfamily protein 844346
ath SUS2 Pre-mRNA-processing-splicing factor 844347
ath U1.5 3766679
ath U12 3767596
ath AT2G29430 coiled-coil protein (DUF572) 3768235
ath U6-26 3768861
ath U2.6 3769727
ath U2.4 3769728
ath U2.2 3769730
ath U2.3 3769731
ath U6acat 3771384
ath U6-29 3771447
ath U2.7 3771548
ath AT2G14285 Small nuclear ribonucleoprotein family protein 5007874
ath AT4G22285 Ubiquitin C-terminal hydrolases superfamily protein 5008155
ath WTF1 Ubiquitin carboxyl-terminal hydrolase family protein 6240517
ath U4.2 28718958
ath U6-1 28719273
ath AT4G01400 oligomeric golgi complex subunit-like protein 28719435
ath AT5G09315 vacuolar sorting protein 9 domain protein 28721089
ath U2.5 28721113


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