ATTED-II : GeneID search result

[←][→] ath AT1G78815 Gene

functional annotation

Function

LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)

GO BP

GO:0009416 [list] [network] response to light stimulus	(700 genes)	IBA
GO:0007275 [list] [network] multicellular organism development	(2714 genes)	IEA

GO CC

GO:0005634 [list] [network] nucleus

(10793 genes)

IBA ISM

GO MF

GO:0003677 [list] [network] DNA binding

(2280 genes)

IEA

KEGG

Protein

NP_565190.1

BLAST

NP_565190.1

Orthologous

[Ortholog page] LSH3 (ath) LSH10 (ath) LSH2 (ath) LSH4 (ath) LSH1 (ath) LSH6 (ath) LSH8 (ath) LOC4330024 (osa) LOC4331099 (osa) LOC4336401 (osa) LOC4338491 (osa) LOC7454352 (ppo) LOC7455945 (ppo) LOC7467540 (ppo) LOC7471962 (ppo) LOC7474992 (ppo) LOC7487181 (ppo) LOC7487704 (ppo) LOC7489106 (ppo) LOC9266624 (osa) LOC11407427 (mtr) LOC11408401 (mtr) LOC11408456 (mtr) LOC11409774 (mtr) LOC11410018 (mtr) LOC11410358 (mtr) LOC11419093 (mtr) LOC11434608 (mtr) LOC25484251 (mtr) LOC25485780 (mtr) LOC25485963 (mtr) LOC25499270 (mtr) LOC25499718 (mtr) LSH5 (ath) LOC100192901 (zma) LOC100217086 (zma) LOC100244642 (vvi) LOC100249172 (vvi) LOC100254926 (vvi) LOC100257253 (vvi) LOC100260366 (vvi) LOC100265705 (vvi) LOC100266079 (vvi) LOC100274783 (zma) LOC100275232 (zma) LOC100276429 (zma) LOC100278049 (zma) LOC100278742 (zma) LOC100304411 (zma) LOC100306082 (gma) LOC100306225 (gma) LOC100527164 (gma) LOC100527409 (gma) LOC100527554 (gma) LOC100778283 (gma) LOC100778886 (gma) LOC100780494 (gma) LOC100786135 (gma) LOC100789834 (gma) LOC100791424 (gma) LOC100802715 (gma) LOC100802937 (gma) LOC100803605 (gma) LOC100803965 (gma) LOC100806134 (gma) LOC100806493 (gma) LOC100806497 (gma) LOC100810655 (gma) LOC100815968 (gma) TFAM1 (sly) LOC101246185 (sly) LOC101247206 (sly) TFAM2 (sly) LOC101252299 (sly) LOC101253723 (sly) LOC101256738 (sly) LOC101260873 (sly) LOC101261831 (sly) LOC101262247 (sly) LOC101263979 (sly) LOC102663941 (gma) LOC103636537 (zma) LOC103651051 (zma) LOC103828755 (bra) LOC103832357 (bra) LOC103833736 (bra) LOC103837296 (bra) LOC103843480 (bra) LOC103843985 (bra) LOC103845277 (bra) LOC103848911 (bra) LOC103851635 (bra) LOC103853147 (bra) LOC103854635 (bra) LOC103858024 (bra) LOC103859037 (bra) LOC103865110 (bra) LOC103865960 (bra) LOC103866652 (bra) LOC103867894 (bra) LOC103867981 (bra) LOC103874577 (bra) LOC104879291 (vvi) LOC107276238 (osa) LOC107278610 (osa)

Subcellular
localization
wolf

nucl 10

(predict for NP_565190.1)

Subcellular
localization
TargetP

chlo 8, other 3

(predict for NP_565190.1)

Gene coexpression

Network^*for
coexpressed
genes

Coexpressed
gene list

[Coexpressed gene list for LSH7]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

264305_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

264305_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

264305_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	844218
Refseq ID (protein)	NP_565190.1

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