GO:0016071 mRNA metabolic process

268 ath genes in this database.
536 gma genes in this database.
310 sly genes in this database.
299 osa genes in this database.
390 zma genes in this database.
498 bra genes in this database.
275 vvi genes in this database.
399 ppo genes in this database.
330 mtr genes in this database.
911 tae genes in this database.
366 hvu genes in this database.
769 ghi genes in this database.
1033 bna genes in this database.
205 cre genes in this database.
317 sbi genes in this database.
317 sot genes in this database.
280 cit genes in this database.
322 bdi genes in this database.
594 nta genes in this database.

[QuickGO]

term: mRNA metabolic process
goid: GO:0016071

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Shaded genes do not have GeneChip data. The output was limited up to 10000.
Species Symbol Gene
coexpression		 Locus
page 		Full name* Entrez Gene ID Evidence*
vvi LOC100240818 ribonuclease II, chloroplastic/mitochondrial 100240818
vvi LOC100240847 uncharacterized LOC100240847 100240847
vvi LOC100241010 uncharacterized LOC100241010 100241010
vvi LOC100241076 splicing factor U2af large subunit B 100241076
vvi LOC100241190 enhancer of mRNA-decapping protein 4 100241190
vvi LOC100241331 transcription elongation factor SPT6 homolog 100241331
vvi LOC100241488 uncharacterized LOC100241488 100241488
vvi LOC100241550 suppressor of mec-8 and unc-52 protein homolog 1 100241550
vvi LOC100241658 putative tRNA pseudouridine synthase 100241658
vvi LOC100241659 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 100241659
vvi LOC100241738 probable U6 snRNA-associated Sm-like protein LSm4 100241738
vvi LOC100241884 protein PELOTA 1 100241884
vvi LOC100241918 DEAD-box ATP-dependent RNA helicase 21 100241918
vvi LOC100242311 uncharacterized LOC100242311 100242311
vvi LOC100242352 probable splicing factor 3A subunit 1 100242352
vvi LOC100242404 G patch domain-containing protein TGH 100242404
vvi LOC100242416 uncharacterized LOC100242416 100242416
vvi LOC100242537 mRNA-decapping enzyme-like protein 100242537
vvi LOC100242667 probable U6 snRNA-associated Sm-like protein LSm4 100242667
vvi LOC100242867 multiple organellar RNA editing factor 7, mitochondrial 100242867
vvi LOC100243034 splicing factor U2af large subunit B 100243034
vvi LOC100243162 uncharacterized LOC100243162 100243162
vvi LOC100243186 uncharacterized LOC100243186 100243186
vvi LOC100243262 cell division cycle 5-like protein 100243262
vvi LOC100243429 polypyrimidine tract-binding protein homolog 3 100243429
vvi LOC100243465 pre-mRNA-processing factor 39-2 100243465
vvi LOC100243572 U1 small nuclear ribonucleoprotein A 100243572
vvi LOC100243602 U4/U6 small nuclear ribonucleoprotein PRP4-like protein 100243602
vvi LOC100243611 U11/U12 small nuclear ribonucleoprotein 65 kDa protein 100243611
vvi LOC100243615 mRNA cap guanine-N7 methyltransferase 1 100243615
vvi LOC100243706 uncharacterized LOC100243706 100243706
vvi LOC100243767 protein SICKLE 100243767
vvi LOC100243779 pre-mRNA-processing protein 40A 100243779
vvi LOC100243925 multiple organellar RNA editing factor 1, mitochondrial 100243925
vvi LOC100243992 uncharacterized LOC100243992 100243992
vvi LOC100244222 ribonuclease TUDOR 1 100244222
vvi LOC100244254 uncharacterized LOC100244254 100244254
vvi LOC100244445 U1 small nuclear ribonucleoprotein 70 kDa 100244445
vvi LOC100244562 pre-mRNA-processing factor 39-1 100244562
vvi LOC100244591 uncharacterized LOC100244591 100244591
vvi LOC100244642 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 100244642
vvi LOC100245077 uncharacterized LOC100245077 100245077
vvi LOC100245136 uncharacterized LOC100245136 100245136
vvi LOC100245238 splicing factor Cactin 100245238
vvi LOC100245383 DNA-directed RNA polymerase II subunit 4 100245383
vvi LOC100245538 uncharacterized LOC100245538 100245538
vvi LOC100245730 transcriptional repressor ILP1 100245730
vvi LOC100245841 SNW/SKI-interacting protein A 100245841
vvi LOC100245949 uncharacterized LOC100245949 100245949
vvi LOC100246039 organelle RRM domain-containing protein 6, chloroplastic 100246039
vvi LOC100246290 uncharacterized LOC100246290 100246290
vvi LOC100246500 uncharacterized LOC100246500 100246500
vvi LOC100246531 uncharacterized LOC100246531 100246531
vvi LOC100246732 uncharacterized LOC100246732 100246732
vvi LOC100246760 zinc finger CCCH domain-containing protein 25 100246760
vvi LOC100246948 uncharacterized LOC100246948 100246948
vvi LOC100247160 zinc finger CCCH domain-containing protein 5 100247160
vvi LOC100247346 U11/U12 small nuclear ribonucleoprotein 65 kDa protein 100247346
vvi LOC100247382 uncharacterized LOC100247382 100247382
vvi LOC100247401 uncharacterized LOC100247401 100247401
vvi LOC100247727 splicing factor U2af small subunit B 100247727
vvi LOC100247737 uncharacterized LOC100247737 100247737
vvi LOC100247782 sm-like protein LSM8 100247782
vvi LOC100247783 probable small nuclear ribonucleoprotein G 100247783
vvi LOC100247854 serine/threonine-protein kinase/endoribonuclease IRE1b 100247854
vvi LOC100248018 protein pleiotropic regulatory locus 1 100248018
vvi LOC100248089 chloride conductance regulatory protein ICln 100248089
vvi LOC100248106 protein MOS2 100248106
vvi LOC100248131 multiple organellar RNA editing factor 2, chloroplastic 100248131
vvi LOC100248403 protein RDM16 100248403
vvi LOC100248449 probable NOT transcription complex subunit VIP2 100248449
vvi LOC100248998 NAD-capped RNA hydrolase DXO1 100248998
vvi LOC100249111 serine/threonine-protein kinase/endoribonuclease IRE1a 100249111
vvi LOC100249160 polypyrimidine tract-binding protein homolog 3 100249160
vvi LOC100249172 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 100249172
vvi LOC100249310 thioredoxin-like protein YLS8 100249310
vvi LOC100249345 protein PALE CRESS, chloroplastic 100249345
vvi LOC100249408 pre-mRNA-processing factor 19 100249408
vvi LOC100249416 pre-mRNA-splicing factor SLU7 100249416
vvi LOC100249543 mRNA-decapping enzyme subunit 2 100249543
vvi LOC100249768 uncharacterized LOC100249768 100249768
vvi LOC100249809 DEAD-box ATP-dependent RNA helicase 35 100249809
vvi LOC100249828 sm-like protein LSM1B 100249828
vvi LOC100250127 uncharacterized LOC100250127 100250127
vvi LOC100250252 uncharacterized LOC100250252 100250252
vvi LOC100250416 protein COP1 SUPPRESSOR 2 100250416
vvi LOC100250427 small nuclear ribonucleoprotein SmD3b 100250427
vvi LOC100250525 pre-mRNA-splicing factor ISY1 homolog-like 100250525
vvi LOC100250563 RNA demethylase ALKBH9B 100250563
vvi LOC100250662 SUPPRESSOR OF ABI3-5 100250662
vvi LOC100250806 uncharacterized LOC100250806 100250806
vvi LOC100250857 sm-like protein LSM1B 100250857
vvi LOC100250997 uncharacterized LOC100250997 100250997
vvi LOC100251024 DAG protein, chloroplastic-like 100251024
vvi LOC100251031 septin and tuftelin-interacting protein 1 homolog 1 100251031
vvi LOC100251234 zinc finger CCHC-type and RNA-binding motif-containing protein 1-like 100251234
vvi LOC100251732 protein STABILIZED1 100251732
vvi LOC100251840 exosome complex component RRP41-like 100251840
vvi LOC100251842 protein EARLY FLOWERING 5 100251842
vvi LOC100251856 nuclear intron maturase 4, mitochondrial 100251856
vvi LOC100251887 uncharacterized LOC100251887 100251887
vvi LOC100251921 serine/arginine-rich splicing factor RS2Z32 100251921
vvi LOC100251960 FIP1[V]-like protein 100251960
vvi LOC100251981 serine/arginine-rich splicing factor RSZ22A 100251981
vvi LOC100252074 nuclear intron maturase 1, mitochondrial 100252074
vvi LOC100252096 pre-mRNA-splicing factor prp12 100252096
vvi LOC100252253 mRNA cap guanine-N7 methyltransferase 2 100252253
vvi LOC100252442 uncharacterized LOC100252442 100252442
vvi LOC100252496 uncharacterized LOC100252496 100252496
vvi LOC100252571 E3 ubiquitin ligase PARAQUAT TOLERANCE 3 100252571
vvi LOC100252594 RNA demethylase ALKBH10B 100252594
vvi LOC100253258 30-kDa cleavage and polyadenylation specificity factor 30 100253258
vvi LOC100253367 116 kDa U5 small nuclear ribonucleoprotein component-like 100253367
vvi LOC100253458 DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 100253458
vvi LOC100253568 5'-3' exoribonuclease 3 100253568
vvi LOC100253599 DExH-box ATP-dependent RNA helicase DExH11 100253599
vvi LOC100253705 splicing factor SF3a60 homolog 100253705
vvi LOC100253711 uncharacterized LOC100253711 100253711
vvi LOC100253751 5'-3' exoribonuclease 4 100253751
vvi LOC100253813 uncharacterized LOC100253813 100253813
vvi LOC100253817 uncharacterized LOC100253817 100253817
vvi LOC100253846 organelle RRM domain-containing protein 2, mitochondrial 100253846
vvi LOC100253870 sm-like protein LSM3B 100253870
vvi LOC100254070 ATP-dependent RNA helicase DEAH11, chloroplastic 100254070
vvi LOC100254130 pre-mRNA-splicing factor SPF27 homolog 100254130
vvi LOC100254193 uncharacterized LOC100254193 100254193
vvi LOC100254201 THO complex subunit 2 100254201
vvi LOC100254274 organelle RRM domain-containing protein 6, chloroplastic 100254274
vvi LOC100254333 transcription elongation factor SPT6 homolog 100254333
vvi LOC100254468 uncharacterized LOC100254468 100254468
vvi LOC100254516 organelle RRM domain-containing protein 2, mitochondrial 100254516
vvi LOC100254714 uncharacterized LOC100254714 100254714
vvi LOC100254787 small nuclear ribonucleoprotein SmD3b 100254787
vvi LOC100254803 uncharacterized LOC100254803 100254803
vvi LOC100254817 serrate RNA effector molecule 100254817
vvi LOC100254926 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 100254926
vvi LOC100254937 uncharacterized LOC100254937 100254937
vvi LOC100255210 spliceosome-associated protein 130 A 100255210
vvi LOC100255266 serine/arginine-rich splicing factor RS31 100255266
vvi LOC100255371 crooked neck-like protein 1 100255371
vvi LOC100255521 protein PAT1 homolog 2 100255521
vvi LOC100255597 serine/arginine-rich splicing factor RS41 100255597
vvi LOC100255879 cleavage stimulating factor 64 100255879
vvi LOC100256103 coilin 100256103
vvi LOC100256199 mRNA capping enzyme-like 100256199
vvi LOC100256218 protein BUD31 homolog 2 100256218
vvi LOC100256258 small nuclear ribonucleoprotein SmD1a 100256258
vvi LOC100256296 cleavage stimulating factor 64 100256296
vvi LOC100256341 RNA demethylase ALKBH10B 100256341
vvi LOC100256390 protein PELOTA 1 100256390
vvi LOC100256436 THO complex subunit 7A 100256436
vvi LOC100256571 protein MLN51 homolog 100256571
vvi LOC100256648 ribonuclease TUDOR 1 100256648
vvi LOC100256702 RNA demethylase ALKBH9B 100256702
vvi LOC100256945 uncharacterized LOC100256945 100256945
vvi LOC100257253 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 100257253
vvi LOC100257533 uncharacterized LOC100257533 100257533
vvi LOC100257571 polyribonucleotide nucleotidyltransferase 2, mitochondrial 100257571
vvi LOC100257584 pre-mRNA-processing-splicing factor 8A 100257584
vvi LOC100257667 small nuclear ribonucleoprotein E-like 100257667
vvi LOC100257709 small nuclear ribonucleoprotein-associated protein B'-like 100257709
vvi LOC100257727 uncharacterized LOC100257727 100257727
vvi LOC100258019 H/ACA ribonucleoprotein complex subunit 4 100258019
vvi LOC100258076 BTB/POZ and MATH domain-containing protein 2 100258076
vvi LOC100258101 regulator of nonsense transcripts UPF2 100258101
vvi LOC100258185 uncharacterized LOC100258185 100258185
vvi LOC100258249 splicing factor 3B subunit 6-like protein 100258249
vvi LOC100258386 small nuclear ribonucleoprotein SmD1a 100258386
vvi LOC100258583 FIP1[III]-like protein 100258583
vvi LOC100258584 serine/arginine-rich splicing factor RS2Z32 100258584
vvi LOC100258813 uncharacterized LOC100258813 100258813
vvi LOC100258827 uncharacterized LOC100258827 100258827
vvi LOC100258959 pentatricopeptide repeat-containing protein At2g15820, chloroplastic 100258959
vvi LOC100259239 nuclear intron maturase 2, mitochondrial 100259239
vvi LOC100259266 zinc finger CCCH domain-containing protein 64 100259266
vvi LOC100259432 sm-like protein LSM36B 100259432
vvi LOC100259460 uncharacterized LOC100259460 100259460
vvi LOC100259677 serine/arginine-rich SC35-like splicing factor SCL33 100259677
vvi LOC100259985 enhancer of mRNA-decapping protein 4 100259985
vvi LOC100260003 uncharacterized LOC100260003 100260003
vvi LOC100260049 uncharacterized LOC100260049 100260049
vvi LOC100260062 uncharacterized LOC100260062 100260062
vvi LOC100260164 uncharacterized LOC100260164 100260164
vvi LOC100260219 multiple organellar RNA editing factor 3, mitochondrial 100260219
vvi LOC100260366 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1 100260366
vvi LOC100260373 uncharacterized LOC100260373 100260373
vvi LOC100260455 uncharacterized LOC100260455 100260455
vvi LOC100260579 uncharacterized LOC100260579 100260579
vvi LOC100260845 5'-3' exoribonuclease 3 100260845
vvi LOC100261013 transcription elongation factor SPT4 homolog 2 100261013
vvi LOC100261042 cleavage and polyadenylation specificity factor subunit 3-I 100261042
vvi LOC100261048 uncharacterized LOC100261048 100261048
vvi LOC100261074 U11/U12 small nuclear ribonucleoprotein 35 kDa protein 100261074
vvi LOC100261229 uncharacterized LOC100261229 100261229
vvi LOC100261251 uncharacterized LOC100261251 100261251
vvi LOC100261447 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 100261447
vvi LOC100261590 uncharacterized LOC100261590 100261590
vvi LOC100261955 protein RRP6-like 3 100261955
vvi LOC100262033 cleavage stimulation factor subunit 77 100262033
vvi LOC100262105 mRNA-decapping enzyme-like protein 100262105
vvi LOC100262218 U4/U6 small nuclear ribonucleoprotein Prp31 homolog 100262218
vvi LOC100262258 DEAD-box ATP-dependent RNA helicase 42 100262258
vvi LOC100262399 serine/arginine-rich splicing factor RSZ22 100262399
vvi LOC100262670 serine/arginine-rich splicing factor RS41 100262670
vvi LOC100262712 uncharacterized LOC100262712 100262712
vvi LOC100262803 exosome complex exonuclease RRP46 homolog 100262803
vvi LOC100263028 U1 small nuclear ribonucleoprotein C-like 100263028
vvi LOC100263190 uncharacterized LOC100263190 100263190
vvi LOC100263222 5'-3' exoribonuclease 3 100263222
vvi LOC100263263 DEAD-box ATP-dependent RNA helicase 21 100263263
vvi LOC100263354 probable NOT transcription complex subunit VIP2 100263354
vvi LOC100263596 uncharacterized LOC100263596 100263596
vvi LOC100263733 protein high chlorophyll fluorescent 107 100263733
vvi LOC100263874 RNA-binding motif protein 25 100263874
vvi LOC100263951 serine/arginine-rich SC35-like splicing factor SCL30A 100263951
vvi LOC100263985 small nuclear ribonucleoprotein F-like 100263985
vvi LOC100264128 nuclear intron maturase 3, mitochondrial 100264128
vvi LOC100264171 nonsense-mediated mRNA decay factor SMG7 100264171
vvi LOC100264276 U2 small nuclear ribonucleoprotein A' 100264276
vvi LOC100264324 lariat debranching enzyme 100264324
vvi LOC100264343 regulator of nonsense transcripts 1 homolog 100264343
vvi LOC100264670 suppressor of mec-8 and unc-52 protein homolog 2 100264670
vvi LOC100264750 uncharacterized LOC100264750 100264750
vvi LOC100264807 sm-like protein LSM5 100264807
vvi LOC100265303 DNA-damage-repair/toleration protein DRT111, chloroplastic 100265303
vvi LOC100265341 nuclear cap-binding protein subunit 1 100265341
vvi LOC100265361 organelle RRM domain-containing protein 1, chloroplastic 100265361
vvi LOC100265488 exosome complex component RRP41 homolog 100265488
vvi LOC100265580 protein RRP6-like 2 100265580
vvi LOC100265629 uncharacterized LOC100265629 100265629
vvi LOC100265692 probable polyribonucleotide nucleotidyltransferase 1, chloroplastic 100265692
vvi LOC100265705 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 100265705
vvi LOC100265801 carbon catabolite repressor protein 4 homolog 1 100265801
vvi LOC100265808 multiple organellar RNA editing factor 8, chloroplastic/mitochondrial 100265808
vvi LOC100265860 exosome complex component RRP45A 100265860
vvi LOC100265941 uncharacterized LOC100265941 100265941
vvi LOC100265980 nuclear cap-binding protein subunit 2 100265980
vvi LOC100266053 serrate RNA effector molecule 100266053
vvi LOC100266079 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 100266079
vvi LOC100266252 cleavage and polyadenylation specificity factor subunit 3-I 100266252
vvi LOC100266477 uncharacterized LOC100266477 100266477
vvi LOC100266834 splicing factor U2af small subunit B 100266834
vvi LOC100266959 SART-1 family protein DOT2 100266959
vvi LOC100267046 uncharacterized LOC100267046 100267046
vvi LOC100267056 uncharacterized LOC100267056 100267056
vvi LOC100267161 nonsense-mediated mRNA decay factor SMG7 100267161
vvi LOC100267175 uncharacterized LOC100267175 100267175
vvi LOC100267233 cleavage stimulation factor subunit 50 100267233
vvi LOC100267400 uncharacterized LOC100267400 100267400
vvi LOC100267766 uncharacterized LOC100267766 100267766
vvi LOC100267801 carbon catabolite repressor protein 4 homolog 1 100267801
vvi LOC100267865 cleavage and polyadenylation specificity factor subunit 2 100267865
vvi LOC100267869 protein PAT1 homolog 100267869
vvi LOC100267894 serine/arginine-rich splicing factor SR45 100267894
vvi LOC100268141 uncharacterized LOC100268141 100268141
vvi LOC100852735 regulator of nonsense transcripts UPF3 100852735
vvi LOC100853013 uncharacterized LOC100853013 100853013
vvi LOC100853958 protein PELOTA 1-like 100853958
vvi LOC100854295 uncharacterized LOC100854295 100854295
vvi LOC100854867 E3 ubiquitin ligase PQT3-like 100854867
vvi LOC100855332 sm-like protein LSM7 100855332
vvi LOC100855389 transcription elongation factor SPT6-like 100855389
vvi LOC100855398 uncharacterized LOC100855398 100855398
vvi LOC104878439 nonsense-mediated mRNA decay factor SMG7-like 104878439
vvi LOC104879291 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 104879291
vvi LOC104879512 uncharacterized LOC104879512 104879512
vvi LOC104880649 protein MLN51 homolog 104880649
vvi LOC104880664 uncharacterized LOC104880664 104880664
vvi LOC104880715 uncharacterized LOC104880715 104880715
vvi LOC109121397 U11/U12 small nuclear ribonucleoprotein 25 kDa protein 109121397
vvi LOC109123481 probable NOT transcription complex subunit VIP2 109123481
vvi LOC109123650 THO complex subunit 2-like 109123650
vvi LOC109124003 small nuclear ribonucleoprotein SmD3b 109124003
vvi LOC132254212 protein PELOTA 1-like 132254212
vvi LOC132254654 sm-like protein LSM1B 132254654


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