GO:0006511 ubiquitin-dependent protein catabolic process

219 ath genes in this database.
481 gma genes in this database.
283 sly genes in this database.
308 osa genes in this database.
319 zma genes in this database.
435 bra genes in this database.
244 vvi genes in this database.
340 ppo genes in this database.
368 mtr genes in this database.
881 tae genes in this database.
333 hvu genes in this database.
782 ghi genes in this database.
910 bna genes in this database.
159 cre genes in this database.
251 sbi genes in this database.
284 sot genes in this database.
223 cit genes in this database.
273 bdi genes in this database.
520 nta genes in this database.

[QuickGO]

term: ubiquitin-dependent protein catabolic process
goid: GO:0006511

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Shaded genes do not have GeneChip data. The output was limited up to 10000.
Species Symbol Gene
coexpression		 Locus
page 		Full name* Entrez Gene ID Evidence*
ath UBC2 ubiquiting-conjugating enzyme 2 814805 IDA,TAS
ath SK14 SKP1-like 14 814846 TAS
ath SK16 SKP1-like 16 814848 TAS
ath AT2G03560 F-box only protein (DUF295) 814885 TAS
ath APC2 anaphase-promoting complex/cyclosome 2 815008 IEA,TAS
ath AT2G04920 F-box and associated interaction domains-containing protein 815039 TAS
ath PAA2 20S proteasome subunit PAA2 815135 TAS
ath MBR1 RING/U-box superfamily protein 816045
ath UBC29 ubiquitin-conjugating enzyme 29 816175 IDA
ath AT2G16810 F-box and associated interaction domains-containing protein 816182 TAS
ath AT2G17020 F-box/RNI-like superfamily protein 816205 TAS
ath APC10 anaphase promoting complex 10 816345
ath LKP2 LOV KELCH protein 2 816408 TAS
ath RPN1A 26S proteasome regulatory subunit S2 1A 816580 TAS
ath UFD1 ubiquitin fusion degradation 1 816666 IEA
ath EBF1 EIN3-binding F box protein 1 817087 TAS
ath AT2G26130 RING/U-box protein with C6HC-type zinc finger 817153 IDA
ath PAG1 20S proteasome alpha subunit G1 817244 TAS
ath UBA1 ubiquitin-activating enzyme 1 817562 TAS
ath AT2G32730 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit 817833 TAS
ath MAC3B MOS4-associated complex 3B 817897 IDA
ath UBQ7 ubiquitin 7 818132 ISS
ath AT2G36370 ubiquitin-protein ligase 818210 TAS
ath AT2G38410 ENTH/VHS/GAT family protein 818422
ath COI1 RNI-like superfamily protein 818581 TAS
ath RHC1A RING-H2 finger C1A 818680 IDA
ath UBP5 ubiquitin-specific protease 5 818691 TAS
ath AT2G41980 Protein with RING/U-box and TRAF-like domain 818798 IEA
ath AT2G42030 RING/U-box superfamily protein 818803 IPI
ath MAX2 RNI-like superfamily protein 818862 TAS
ath AT2G44410 RING/U-box superfamily protein 819048 IGI
ath SK20 SKP1-like 20 819203 IEA
ath UBC6 ubiquitin-conjugating enzyme 6 819211 IDA,ISS,TAS
ath UBQ6 ubiquitin 6 819323 ISS
ath RPT5A regulatory particle triple-A ATPase 5A 819718 TAS
ath APC11 anaphase-promoting complex/cyclosome 11 819756
ath AT3G07200 RING/U-box superfamily protein 819908 IGI
ath AT3G07550 RNI-like superfamily protein 819944 TAS
ath UBC11 ubiquitin-conjugating enzyme 11 820016 IDA,TAS
ath AT3G08790 ENTH/VHS/GAT family protein 820026
ath UBQ8 ubiquitin 8 820137 ISS
ath MEE34 Mov34/MPN/PAD-1 family protein 820298 TAS
ath AT3G13672 TRAF-like superfamily protein 820573 IEA
ath PAE2 20S proteasome alpha subunit E2 820649 TAS
ath UBC32 ubiquitin-conjugating enzyme 32 820956 IDA
ath AT3G03730 F-box/kelch-repeat protein, putative (DUF295) 821173 IDA,ISS
ath RAD23C Rad23 UV excision repair protein family 821195
ath UBC19 ubiquitin-conjugating enzyme19 821545 IDA
ath UBP7 ubiquitin carboxyl-terminal hydrolase 821682
ath AT3G21410 F-box and associated interaction domains-containing protein 821695 TAS
ath SK8 SKP1-like 8 821737 TAS
ath SK7 SKP1-like 7 821738 TAS
ath SK10 SKP1-like 10 821740 TAS
ath PAC1 20S proteasome alpha subunit C1 821774 TAS
ath PBD1 20S proteasome beta subunit D1 821834 TAS
ath XBAT35 uncharacterized protein 821907 IGI
ath PRT1 proteolysis 1 822078 TAS
ath PBB1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein 822364 TAS
ath AT3G42830 RING/U-box superfamily protein 823327 TAS
ath UBC13 ubiquitin-conjugating enzyme 13 823796 IDA,TAS
ath AT3G46910 Cullin family protein 823844 IEA
ath VFB2 VIER F-box protein 2 824170 TAS
ath PAD1 20S proteasome alpha subunit PAD1 824289 TAS
ath ETO1 tetratricopeptide repeat (TPR)-containing protein 824340
ath SK6 SKP1-like 6 824472 IEA
ath AT3G53970 proteasome inhibitor-like protein 824564
ath FBL17 RNI-like superfamily protein 824630 TAS
ath UBC14 ubiquitin-conjugating enzyme 14 824704 IDA,TAS
ath SDIR1 RING/U-box superfamily protein 824718 IMP
ath AT3G58030 RING/U-box superfamily protein 824972 IPI
ath SINAT2 uncharacterized protein 824973 IEA
ath PBF1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein 825253 TAS
ath AT3G61790 Protein with RING/U-box and TRAF-like domain 825352 IEA
ath TIR1 F-box/RNI-like superfamily protein 825473 TAS
ath RMA1 RING membrane-anchor 1 825654 IDA
ath AT4G04690 F-box and associated interaction domains-containing protein 825802 TAS
ath UBQ11 ubiquitin 11 825847 ISS
ath AT4G05460 RNI-like superfamily protein 825896 TAS
ath AT4G05470 RNI-like superfamily protein 825897 TAS
ath AT4G05490 RNI-like superfamily protein 825898 TAS
ath VFB3 VIER F-box protein 3 826171 TAS
ath FBW2 F-BOX WITH WD-40 2 826476 IDA,TAS
ath SGT1B phosphatase-like protein 826728 IMP
ath AT4G12100 Cullin family protein 826818 IEA
ath AT4G12810 F-box family protein 826893 IDA
ath AT4G12820 F-box/kelch-repeat protein, putative (DUF295) 826894 IDA,ISS
ath PBD2 20S proteasome beta subunit D2 827135 TAS
ath AT4G15475 F-box/RNI-like superfamily protein 827219 TAS
ath AT4G15563 F-box-like protein 827231
ath RING SBP (S-ribonuclease binding protein) family protein 827714
ath PUB8 plant U-box 8 827885 IDA
ath GRH1 GRR1-like protein 1 828045 IGI,TAS
ath UBQ14 Ubiquitin family protein 828148 ISS
ath AT4G22820 A20/AN1-like zinc finger family protein 828381
ath SGT1A phosphatase-like protein 828457 ISS
ath AFB4 RNI-like superfamily protein 828541 TAS
ath AT4G24820 26S proteasome regulatory subunit Rpn7 828585 TAS
ath CSN6B COP9 signalosome subunit 6B 828749 ISS
ath AT4G27880 Protein with RING/U-box and TRAF-like domain 828901 IEA
ath UBC9 ubiquitin conjugating enzyme 9 828909 IDA,TAS
ath RPT2a regulatory particle AAA-ATPase 2A 829025 TAS
ath AT4G30640 RNI-like superfamily protein 829187 TAS
ath AT4G30940 BTB/POZ domain with WD40/YVTN repeat-like protein 829219
ath PBA1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein 829257 TAS
ath AT4G32760 ENTH/VHS/GAT family protein 829412
ath AT4G33160 F-box family protein 829453 TAS
ath SLOMO F-box family protein 829457 TAS
ath MBR2 RING/U-box superfamily protein 829550
ath SK12 SKP1-like 12 829598 ISS
ath UBC17 ubiquitin-conjugating enzyme 17 829793 TAS
ath RPN10 regulatory particle non-ATPase 10 830019 TAS
ath UBC22 ubiquitin-conjugating enzyme 22 830390 IDA
ath EMB2771 E3 ubiquitin ligase 830439 TAS
ath RPN8A RP non-ATPase subunit 8A 830463 TAS
ath UBA 2 ubiquitin activating enzyme 2 830534 TAS
ath EMB2107 26S proteasome regulatory subunit, putative (RPN5) 830850 TAS
ath PRT6 proteolysis 6 830916 IDA
ath AT5G15400 U-box domain-containing protein 831392 IGI
ath AT5G02920 F-box/RNI-like superfamily protein 831396 TAS
ath UCH1 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 831492 IEA
ath AT5G16880 Target of Myb protein 1 831551
ath AT5G01760 ENTH/VHS/GAT family protein 831682
ath AT5G01720 RNI-like superfamily protein 831688 IMP,TAS
ath AIRP2 RING/U-box superfamily protein 831747 IMP
ath UBQ3 polyubiquitin 3 831899 ISS
ath RPT6A regulatory particle triple-A ATPase 6A 832121 TAS
ath UBQ4 ubiquitin 4 832184 TAS
ath AT5G23540 Mov34/MPN/PAD-1 family protein 832420 TAS
ath EBF2 EIN3-binding F box protein 2 832607 TAS
ath PAA1 proteasome alpha subunit A1 833524 TAS
ath UBQ9 ubiquitin 9 833742 ISS
ath RAD23D Rad23 UV excision repair protein family 833835
ath PBB2 20S proteasome beta subunit PBB2 834056 TAS
ath UBC4 ubiquitin conjugating enzyme 4 834136 IDA,TAS
ath UBC8 ubiquitin conjugating enzyme 8 834173 IDA,TAS
ath AT5G42190 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein 834224 TAS
ath PAF1 proteasome alpha subunit F1 834290 TAS
ath UBC18 ubiquitin-conjugating enzyme 18 834314 TAS
ath RPT4A regulatory particle triple-A ATPase 4A 834316 TAS
ath AT5G43190 Galactose oxidase/kelch repeat superfamily protein 834337 TAS
ath AT5G45360 F-box family protein 834572 IDA
ath AT5G45620 Proteasome component (PCI) domain protein 834602 TAS
ath AT5G48655 RING/U-box superfamily protein 834923 IGI
ath AT5G48990 Galactose oxidase/kelch repeat superfamily protein 834958 IDA
ath UBC27 ubiquitin-conjugating enzyme 27 835159 IDA
ath BAG1 BCL-2-associated athanogene 1 835281
ath UBC10 ubiquitin-conjugating enzyme 10 835411 IDA,TAS
ath AT5G53330 Ubiquitin-associated/translation elongation factor EF1B protein 835414
ath AT5G53360 TRAF-like superfamily protein 835417 IEA
ath AT5G53840 F-box/RNI-like/FBD-like domains-containing protein 835465 TAS
ath UBC30 ubiquitin-conjugating enzyme 30 835714 IDA
ath CSN6A COP9 signalosome subunit 6A 835727 IMP
ath ZTL Galactose oxidase/kelch repeat superfamily protein 835842 TAS
ath XBAT32 uncharacterized protein 835882 IDA
ath RPT3 regulatory particle triple-A ATPase 3 835941 TAS
ath AT5G59140 BTB/POZ domain-containing protein 836032 IEA
ath UBC7 ubiquitin-conjugating enzyme E2 836048 IDA,ISS,TAS
ath UBC3 ubiquitin-conjugating enzyme 3 836374 IDA,TAS
ath AT5G63640 ENTH/VHS/GAT family protein 836484
ath RPN5B regulatory particle non-ATPase subunit 5B 836597 TAS
ath PAD2 proteasome alpha subunit D2 836746 TAS
ath AT1G06210 ENTH/VHS/GAT family protein 837130
ath AT1G09060 JmjC domain protein JMJ24 837427
ath PBE1 20S proteasome beta subunit E1 837863 TAS
ath UBC1 ubiquitin carrier protein 1 838002 IDA,TAS
ath AT1G15130 Endosomal targeting BRO1-like domain-containing protein 838077
ath RAD23A Rad23 UV excision repair protein family 838188
ath PAB1 proteasome subunit PAB1 838217 TAS
ath UBC36 ubiquitin-conjugating enzyme 36 838260 IDA
ath UBC34 ubiquitin-conjugating enzyme 34 838300 IDA
ath AT1G18910 zinc ion binding protein 838472 IDA
ath SK4 SKP1-like 4 838604 TAS
ath EMB2719 PAM domain (PCI/PINT associated module) protein 838609 TAS
ath AT1G21380 Target of Myb protein 1 838737
ath SKP2A F-box/RNI-like superfamily protein 838740
ath PBC1 proteasome beta subunit C1 838776 TAS
ath AT1G23390 Kelch repeat-containing F-box family protein 838947
ath AT1G26800 RING/U-box superfamily protein 839223
ath CUL3 cullin 3 839226 TAS
ath UBP2 ubiquitin-specific protease 2 839397 TAS
ath AT1G04810 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit 839409 TAS
ath MAC3A MOS4-associated complex 3A 839503 IDA
ath ATS9 non-ATPase subunit 9 839789 TAS
ath UFO F-box family protein 839982 TAS
ath ATUBC2-1 Ubiquitin-conjugating enzyme family protein 841072 IDA,TAS
ath PAF2 20S proteasome alpha subunit F2 841128 TAS
ath AT1G48530 proteasome inhibitor-like protein 841274
ath AT1G51290 F-box and associated interaction domains-containing protein 841552 TAS
ath AT1G51320 F-box and associated interaction domains-containing protein 841555 TAS
ath AT1G51550 Kelch repeat-containing F-box family protein 841580 TAS
ath UBP6 ubiquitin-specific protease 6 841596
ath RPT1A regulatory particle triple-A 1A 841812 TAS
ath PAE1 20S proteasome alpha subunit E1 841822 TAS
ath UBQ12 ubiquitin 12 841949 ISS
ath AT1G55660 FBD, F-box and Leucine Rich Repeat domains containing protein 842015
ath UPL1 LOW protein: E3 ubiquitin ligase-like protein 842036 TAS
ath PBG1 20S proteasome beta subunit G1 842098 TAS
ath AT1G59790 Cullin family protein 842272 IEA
ath AT1G59800 Cullin family protein 842273 IEA
ath UBC5 ubiquitin-conjugating enzyme 5 842683 IDA,TAS
ath UBC28 ubiquitin-conjugating enzyme 28 842728 IDA
ath RPN12a regulatory particle non-ATPase 12A 842760 TAS
ath UBQ13 ubiquitin 13 842845 ISS
ath UCH2 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 842876 IEA
ath AT1G66650 Protein with RING/U-box and TRAF-like domain 842983 IGI
ath AT1G67160 F-box/kelch-repeat protein, putative (DUF295) 843036 IDA,ISS
ath FKF1 flavin-binding, kelch repeat, f box 1 843133 TAS
ath CUL3B cullin 3B 843303 TAS
ath UPL2 ubiquitin-protein ligase 2 843368 TAS
ath AT1G74770 zinc ion binding protein 843816
ath UBC16 ubiquitin-conjugating enzyme 16 843880 TAS
ath SKP1 S phase kinase-associated protein 1 843928 TAS
ath AT1G75990 PAM domain (PCI/PINT associated module) protein 843931 TAS
ath AT1G76920 F-box family protein 844027 IDA,TAS
ath AT1G76970 Target of Myb protein 1 844033
ath SKP2B RNI-like superfamily protein 844036 TAS
ath PBC2 20S proteasome beta subunit C2 844080 TAS
ath UBC35 ubiquitin-conjugating enzyme 35 844224 IDA
ath AT1G80570 RNI-like superfamily protein 844396 TAS


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