GO:0010015 root morphogenesis

324 ath genes in this database.
19 gma genes in this database.
9 sly genes in this database.
5 osa genes in this database.
9 zma genes in this database.
6 bra genes in this database.
1 vvi genes in this database.
7 ppo genes in this database.
11 mtr genes in this database.
17 tae genes in this database.
2 hvu genes in this database.
19 ghi genes in this database.
12 bna genes in this database.
3 cre genes in this database.
3 sbi genes in this database.
12 sot genes in this database.
4 cit genes in this database.
2 bdi genes in this database.
22 nta genes in this database.

[QuickGO]

term: root morphogenesis
goid: GO:0010015

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Shaded genes do not have GeneChip data. The output was limited up to 10000.
Species Symbol Gene
coexpression		 Locus
page 		Full name* Entrez Gene ID Evidence*
ath AT2G01060 myb-like HTH transcriptional regulator family protein 814630
ath WOL CHASE domain containing histidine kinase protein 814714
ath AL6 alfin-like 6 814776
ath MRH6 Adenine nucleotide alpha hydrolases-like superfamily protein 814899
ath RGF8 root meristem growth factor 814909
ath RGF3 root meristem growth factor 814929
ath AIR3 Subtilisin-like serine endopeptidase family protein 814953
ath AT2G17500 Auxin efflux carrier family protein 816256
ath P4H5 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 816281
ath AT2G18480 Major facilitator superfamily protein 816363
ath AT2G18840 Integral membrane Yip1 family protein 816399
ath HBT CDC27 family protein 816519
ath RPT2b AAA-type ATPase family protein 816533
ath GEM GRAM domain family protein 816780
ath IAA8 indoleacetic acid-induced protein 8 816798
ath P4H13 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 816841
ath ICK1 Cyclin-dependent kinase inhibitor family protein 816875
ath LRL1 LJRHL1-like 1 816961
ath AT2G25010 Aminotransferase-like, plant mobile domain family protein 817040
ath RR12 response regulator 12 817056
ath PIP5K3 1-phosphatidylinositol-4-phosphate 5-kinase 3 817182
ath KT1 K+ transporter 1 817206
ath LHW transcription factor-like protein 817265
ath LBD13 LOB domain-containing protein 13 817584
ath ETC2 Homeodomain-like superfamily protein 817593
ath SKdZeta SHAGGY-related protein kinase dZeta 817649
ath AT2G33680 Tetratricopeptide repeat (TPR)-like superfamily protein 817933
ath CIPK13 CBL-interacting protein kinase 13 817979
ath PID Protein kinase superfamily protein 818030
ath AIR9 Outer arm dynein light chain 1 protein 818033
ath SRO1 uncharacterized protein 818116
ath XEG113 xyloglucanase 113 818128
ath ACT1 actin 1 818339
ath AUX1 Transmembrane amino acid transporter family protein 818390
ath AT2G41970 Protein kinase superfamily protein 818797
ath LBD16 lateral organ boundaries-domain 16 818843
ath AT2G42490 Copper amine oxidase family protein 818849
ath MPK6 MAP kinase 6 818982
ath HAM1 GRAS family transcription factor 819124
ath LBD18 LOB domain-containing protein 18 819150
ath ROPGEF4 RHO guanyl-nucleotide exchange factor 4 819197
ath ABCB4 ATP binding cassette subfamily B4 819314
ath WDL1 WVD2-like 1 819621 IMP
ath Cand2 Protein of unknown function, transmembrane-40 819662 IMP
ath LRS1 Transducin/WD40 repeat-like superfamily protein 819671
ath TOPP9 Calcineurin-like metallo-phosphoesterase superfamily protein 819724
ath ATCHR12 SNF2/Brahma-type chromatin-remodeling protein CHR12 819772
ath P4H2 P4H isoform 2 819804
ath AT3G06440 Galactosyltransferase family protein 819820
ath IBR3 acyl-CoA dehydrogenase-like protein 819865
ath AIR12 auxin-induced in root cultures-like protein 819927
ath OBE1 potyvirus VPg interacting protein (DUF1423) 819969
ath SCN1 Immunoglobulin E-set superfamily protein 819979
ath KOB1 elongation defective 1 protein / ELD1 protein 820002
ath WOX5 WUSCHEL related homeobox 5 820297
ath AT3G11600 E3 ubiquitin-protein ligase 820333
ath RGF7 root meristem growth factor-like protein 820386
ath BIG auxin transport protein (BIG) 820398
ath ARP5 actin-related protein 5 820416
ath VCS Transducin/WD40 repeat-like superfamily protein 820530
ath RHD3 Root hair defective 3 GTP-binding protein (RHD3) 820600
ath PME3 pectin methylesterase 3 820651
ath HPY2 RING/U-box superfamily protein 820746
ath TCTP translationally controlled tumor protein 820916
ath RR1 response regulator 1 820940
ath RFC3 Translation elongation factor EF1B/ribosomal protein S6 family protein 820974
ath AT3G01730 uncharacterized protein 821089
ath CYP38 cyclophilin 38 821137
ath ILR2 iaa-leucine resistant 2 821378
ath ACT2 actin 2 821411
ath PMT5 polyol/monosaccharide transporter 5 821416
ath ATM1 myosin 1 821534
ath UBP14 ubiquitin-specific protease 14 821610
ath NEK5 Serine/Threonine kinase catalytic domain protein 821634
ath MKK5 MAP kinase kinase 5 821676
ath ATXR2 histone-lysine N-methyltransferase ATXR2 821736
ath LOX5 PLAT/LH2 domain-containing lipoxygenase family protein 821808
ath CEG F-box and associated interaction domains-containing protein 821836
ath CLE19 CLAVATA3/ESR-RELATED 19 822009
ath AT3G24240 Leucine-rich repeat receptor-like protein kinase family protein 822011
ath AMT1;3 ammonium transporter 1;3 822018
ath CLE41 CLAVATA3/ESR-RELATED 41 822075
ath ATL5 ribosomal protein L5 822138 IMP
ath BHLH32 basic helix-loop-helix 32 822159
ath ATN1 Protein kinase superfamily protein 822378
ath CLE25 CLAVATA3/ESR-RELATED 25 822475
ath VTI13 vesicle transport V-snare 13 822557
ath AGL79 AGAMOUS-like 79 822726
ath AT3G43960 Cysteine proteinases superfamily protein 823513
ath CYP71 cyclophilin71 823585
ath MAPKKK20 mitogen-activated protein kinase kinase kinase 20 824193
ath RHD4 Phosphoinositide phosphatase family protein 824309
ath NodGS nodulin/glutamine synthase-like protein 824484
ath HAG1 histone acetyltransferase of the GNAT family 1 824626 IMP
ath MRH2 Armadillo/beta-catenin repeat family protein / kinesin motor family protein 824652
ath AT3G56930 DHHC-type zinc finger family protein 824860
ath AT3G57630 exostosin family protein 824932
ath LBD29 lateral organ boundaries-domain 29 824988
ath CR4 crinkly4 825111
ath HAM2 GRAS family transcription factor 825234
ath CYSC1 cysteine synthase C1 825317
ath TUBG1 gamma-tubulin 825338
ath PRP3 proline-rich protein 3 825442
ath XT1 xylosyltransferase 1 825446
ath TIR1 F-box/RNI-like superfamily protein 825473
ath IBR1 indole-3-butyric acid response 1 825905
ath PCN Transducin family protein / WD-40 repeat family protein 826172
ath ELP6 elongator protein 6 826600 IMP
ath AGL14 AGAMOUS-like 14 826795
ath AIR1 Auxin-Induced in Root cultures 1 826868
ath CLE44 CLAVATA3/ESR-RELATED 44 826934
ath AMT1;1 ammonium transporter 1;1 826983
ath RLP48 receptor like protein 48 827022
ath IBR10 indole-3-butyric acid response 10 827088
ath IAA14 indole-3-acetic acid inducible 14 827102
ath ATCSLB05 Cellulose synthase family protein 827195
ath RR2 response regulator 2 827297
ath COBL7 COBRA-like protein-7 precursor 827298
ath AT4G16444 tail-anchored protein insertion receptor WRB-like protein 827341
ath RGF6 root meristem growth factor 827350
ath HB-2 homeobox protein 2 827384
ath AT4G17810 C2H2 and C2HC zinc fingers superfamily protein 827503
ath MRH1 Leucine-rich repeat protein kinase family protein 827598
ath BIN2 Protein kinase superfamily protein 827605
ath BAM3 Leucine-rich receptor-like protein kinase family protein 827774
ath JMJ14 JUMONJI 14 827788
ath AT4G21060 Galactosyltransferase family protein 827853
ath CPL3 CAPRICE-like MYB3 827917
ath XT2 UDP-xylosyltransferase 2 827940
ath EXPA17 expansin A17 827983
ath ANL2 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 828022
ath RHS13 root hair specific 13 828083
ath HAM3 GRAS family transcription factor 828208
ath TAR2 tryptophan aminotransferase related 2 828569
ath PFK3 phosphofructokinase 3 828733
ath AT4G26540 Leucine-rich repeat receptor-like protein kinase family protein 828760
ath SHV3 PLC-like phosphodiesterase family protein 828776
ath HAE Leucine-rich receptor-like protein kinase family protein 828967
ath CAK1AT CDK-activating kinase 1AT 829019
ath RPT2a regulatory particle AAA-ATPase 2A 829025 IMP
ath ADS1 MATE efflux family protein 829035 IMP
ath VLN4 villin 4 829139
ath AT4G30260 Integral membrane Yip1 family protein 829149
ath LRL2 LJRHL1-like 2 829223
ath AT4G31170 Protein kinase superfamily protein 829245
ath AT4G31230 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein 829250
ath UTr7 UDP-N-acetylglucosamine (UAA) transporter family 829287
ath RR10 response regulator 10 829322
ath RPD1 Ubiquitin carboxyl-terminal hydrolase family protein 829487
ath RSL2 ROOT HAIR DEFECTIVE 6-LIKE 2 829531
ath COW1 Sec14p-like phosphatidylinositol transfer family protein 829610
ath RAC3 RAC-like 3 829654
ath AT4G35910 Adenine nucleotide alpha hydrolases-like superfamily protein 829746
ath AT4G35987 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 829754
ath PLP5 PATATIN-like protein 5 829860
ath PLP1 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein 829861
ath RPN10 regulatory particle non-ATPase 10 830019
ath HB16 homeobox protein 16 830169
ath MOP10 Pollen Ole e 1 allergen and extensin family protein 830433
ath GCP2 gamma-tubulin complex protein 2 830445
ath ASA1 anthranilate synthase alpha subunit 1 830457
ath DFB DHFS-FPGS homolog B 830484
ath AT5G06270 uncharacterized protein 830515
ath PI-4KBETA2 phosphatidylinositol 4-OH kinase beta2 830794
ath RLF reduced lateral root formation 830827
ath ACT7 actin 7 830841
ath AIL6 AINTEGUMENTA-like 6 830915
ath ALF4 aberrant root formation protein 830970
ath NOXY2 uncharacterized protein 831035
ath CLE22 CLAVATA3/ESR-RELATED 22 831098
ath CLE40 CLAVATA3/ESR-RELATED 40 831139
ath EMB3011 RNA helicase family protein 831141
ath WRKY75 WRKY DNA-binding protein 75 831147
ath CRN Protein kinase superfamily protein 831170
ath MYB66 myb domain protein 66 831327
ath CSLD2 cellulose-synthase like D2 831554
ath EXO70A1 exocyst subunit exo70 family protein A1 831809
ath NAKR1 Heavy metal transport/detoxification superfamily protein 831874 IMP
ath EIN2 NRAMP metal ion transporter family protein 831889
ath Cand7 Lung seven transmembrane receptor family protein 831970 IMP
ath PUCHI Integrase-type DNA-binding superfamily protein 831974
ath CHR23 homeotic protein regulator 832051
ath AT5G19700 MATE efflux family protein 832090 IMP
ath XIK myosin family protein with Dil 832171
ath NPH4 Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein 832196
ath AT5G24740 vacuolar protein sorting-associated protein, putative (DUF1162) 832543 IMP
ath DGR2 transmembrane protein, putative (Protein of unknown function, DUF642) 832620 IMP
ath IAA28 indole-3-acetic acid inducible 28 832658
ath TOPP8 Calcineurin-like metallo-phosphoesterase superfamily protein 832846
ath RSL1 RHD SIX-LIKE 1 833758
ath SOS4 pfkB-like carbohydrate kinase family protein 833763
ath MYB23 myb domain protein 23 834031
ath AT5G41950 Tetratricopeptide repeat (TPR)-like superfamily protein 834200
ath DL1 dynamin-like protein 834213
ath MYA2 myosin 2 834412
ath MAP18 microtubule-associated protein 18 834489
ath maMYB Duplicated homeodomain-like superfamily protein 834578
ath AT5G46520 Disease resistance protein (TIR-NBS-LRR class) family 834695
ath TRN2 Tetraspanin family protein 834713 IMP
ath OBE2 potyvirus VPg interacting protein (DUF1423) 834868
ath AT5G48940 Leucine-rich repeat transmembrane protein kinase family protein 834952
ath SHV2 COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family 834987
ath XIP1 Leucine-rich repeat transmembrane protein kinase family protein 835028
ath AT5G49680 SABRE-like protein 835031
ath RHD2 NADPH/respiratory burst oxidase protein D 835179
ath AT5G51310 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 835205
ath AT5G52050 MATE efflux family protein 835280 IMP
ath D6PK D6 protein kinase 835689
ath OLI2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 835690 IMP
ath AT5G56040 Leucine-rich receptor-like protein kinase family protein 835702
ath EXPA14 expansin A14 835731
ath AGP14 arabinogalactan protein 14 835755
ath MKK6 MAP kinase kinase 6 835759
ath RID2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 835833
ath AIL5 AINTEGUMENTA-like 5 835845
ath XBAT32 uncharacterized protein 835882
ath LRL3 LJRHL1-like 3 835913
ath PSY1 plant peptide containing sulfated tyrosine 1 835979
ath PIP2;4 plasma membrane intrinsic protein 2;4 836187
ath RGF1 root meristem growth factor 1 836202
ath HDA18 histone deacetylase of the RPD3/HDA1 superfamily 18 836228
ath AT5G61350 Protein kinase superfamily protein 836256
ath AGD1 ARF-GAP domain 1 836319
ath AT5G63220 golgi-to-ER traffic-like protein 836442
ath PI-4KBETA1 phosphatidylinositol 4-OH kinase beta1 836528
ath RGF9 root meristem growth factor 836598
ath BST1 DNAse I-like superfamily protein 836633
ath AIL7 AINTEGUMENTA-like 7 836677
ath HSL2 HAESA-like 2 836700
ath AT5G66815 uncharacterized protein 836815
ath POM1 Chitinase family protein 837095
ath GSK1 GSK3/SHAGGY-like protein kinase 1 837150
ath ATMPK13 Protein kinase superfamily protein 837303
ath TPST tyrosylprotein sulfotransferase 837318
ath TIL1 DNA polymerase epsilon catalytic subunit 837346
ath ZFP5 zinc finger protein 5 837588
ath SUB Leucine-rich repeat protein kinase family protein 837654
ath LRX1 leucine-rich repeat/extensin 1 837756
ath AT1G12470 zinc ion binding protein 837804 IMP
ath EXPA7 expansin A7 837813
ath RSH2 root hair specific 2 837853
ath RGF2 root meristem growth factor-like protein 837923
ath GN sec7 domain-containing protein 837958
ath ETC1 Homeodomain-like superfamily protein 838096
ath CYCA2;3 CYCLIN A2;3 838127
ath RSH3 root hair specific 3 838214
ath UBC36 ubiquitin-conjugating enzyme 36 838260
ath NRP2 NAP1-related protein 2 838462
ath ARF19 auxin response factor 19 838505
ath RRA3 Nucleotide-diphospho-sugar transferase family protein 838519
ath ROP2 RHO-related protein from plants 2 838598
ath SKP2A F-box/RNI-like superfamily protein 838740
ath AT1G22860 Vacuolar sorting protein 39 838891 IMP
ath TNO1 TGN-related, localized SYP41 interacting protein 839062 IMP
ath AT1G24620 EF hand calcium-binding protein family 839076
ath ASB1 anthranilate synthase beta subunit 1 839103
ath CLE9 CLAVATA3/ESR-RELATED 9 839200
ath XIB myosin XI B 839246
ath AT1G01910 P-loop containing nucleoside triphosphate hydrolases superfamily protein 839305
ath AT1G02410 cytochrome c oxidase assembly protein CtaG / Cox11 family 839364
ath AtHB23 homeobox protein 23 839587
ath RSL4 root hair defective 6-like 4 839667
ath SRD2 snRNA activating complex family protein 839756
ath CIPK18 CBL-interacting protein kinase 18 839797
ath BRX DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein 840078
ath RCD1 WWE protein-protein interaction domain protein family 840115
ath AT1G34110 Leucine-rich receptor-like protein kinase family protein 840310
ath MCM2 minichromosome maintenance (MCM2/3/5) family protein 841056
ath NRAMP2 NRAMP metal ion transporter 2 841127 IGI
ath RHL1 root hair initiation protein root hairless 1 (RHL1) 841258
ath AT1G48550 Vacuolar protein sorting-associated protein 26 841276
ath CLE11 CLAVATA3/ESR-RELATED 11 841323
ath ACT8 actin 8 841347
ath LACS2 long-chain acyl-CoA synthetase 2 841367
ath HKL1 hexokinase-like 1 841468
ath ROPGEF11 rop guanine nucleotide exchange factor-like protein 841654
ath LOX1 lipoxygenase 1 841944
ath ZF14 MATE efflux family protein 842203 IMP
ath DL3 dynamin-like 3 842251
ath PEN3 ABC-2 and Plant PDR ABC-type transporter family protein 842281
ath RHS8 root hair specific 8 842651
ath RHD1 NAD(P)-binding Rossmann-fold superfamily protein 842752
ath CLV2 Leucine-rich repeat (LRR) family protein 842849
ath CLE18 CLAVATA3/ESR-RELATED 18 842929
ath RHD6 ROOT HAIR DEFECTIVE6 842965
ath GCS1 glucosidase 1 843070
ath ARR11 response regulator 11 843096
ath MYB62 myb domain protein 62 843161 IMP
ath TADA tRNA arginine adenosine deaminase 843202
ath IDA Putative membrane lipoprotein 843208
ath CLE10 CLAVATA3/ESR-RELATED 10 843263
ath RRG sporulation protein (DUF155) 843270
ath CLE26 CLAVATA3/ESR-RELATED 26 843334
ath TAA1 uncharacterized protein 843393
ath CLE17 CLAVATA3/ESR-RELATED 17 843428
ath PIN3 Auxin efflux carrier family protein 843432
ath AT1G71090 Auxin efflux carrier family protein 843449
ath AT1G71410 ARM repeat superfamily protein 843482
ath SOL1 carboxypeptidase D 843499
ath AT1G72490 uncharacterized protein 843581
ath CLE13 CLAVATA3/ESR-RELATED 13 843734
ath XXT5 xyloglucan xylosyltransferase 5 843779
ath BS1 activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1 843791
ath NRP1 NAP1-related protein 1 843797
ath AT1G74800 Galactosyltransferase family protein 843819
ath RRA2 Nucleotide-diphospho-sugar transferase family protein 843848
ath RRA1 Nucleotide-diphospho-sugar transferase family protein 843849
ath ARAC5 RAC-like GTP binding protein 5 843917
ath AT1G76880 Duplicated homeodomain-like superfamily protein 844023
ath PIN6 Auxin efflux carrier family protein 844046
ath LAX3 uncharacterized protein 844105
ath PIP5K2 phosphatidylinositol-4-phosphate 5-kinase 2 844110
ath UBC35 ubiquitin-conjugating enzyme 35 844224
ath CLE8 CLAVATA3/ESR-RELATED 8 3767662
ath AT2G12646 PLATZ transcription factor family protein 3768403
ath CLE45 CLAVATA3/ESR-RELATED 45 5007842
ath AT3G02242 root meristem growth factor-like protein 6240491
ath AT5G44585 uncharacterized protein 6241037
ath RGF5 root meristem growth factor 6241076
ath MIR2111b 10723137
ath CLE20 CLAVATA3/ESR-RELATED 20 28716239
ath CLE14 CLAVATA3/ESR-RELATED 14 28717391
ath CLE16 CLAVATA3/ESR-RELATED 16 28717514
ath CLE21 CLAVATA3/ESR-RELATED 21 28721288


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