GO:0035770 ribonucleoprotein granule
| 226 ath genes in this database. |
| 114 gma genes in this database. |
| 77 sly genes in this database. |
| 71 osa genes in this database. |
| 55 zma genes in this database. |
| 131 bra genes in this database. |
| 62 vvi genes in this database. |
| 93 ppo genes in this database. |
| 29 mtr genes in this database. |
| 87 tae genes in this database. |
| 80 hvu genes in this database. |
| 193 ghi genes in this database. |
| 249 bna genes in this database. |
| 118 cre genes in this database. |
| 76 sbi genes in this database. |
| 39 sot genes in this database. |
| 57 cit genes in this database. |
| 75 bdi genes in this database. |
| 64 nta genes in this database. |
[QuickGO]
term: ribonucleoprotein granule
goid: GO:0035770
Shaded genes do not have GeneChip data. The output was limited up to 10000.
| Species | Symbol | Gene coexpression |
Locus page |
Full name* | Entrez Gene ID | Evidence* |
|---|---|---|---|---|---|---|
| ath | PAHX | phytanoyl-CoA dioxygenase (PhyH) family protein | 814677 | |||
| ath | MLP328 | MLP-like protein 328 | 814681 | |||
| ath | MLP329 | MLP-like protein 329 | 814682 | |||
| ath | NMD3 | nonsense-mediated mRNA decay NMD3 family protein | 814908 | |||
| ath | AT2G05830 | NagB/RpiA/CoA transferase-like superfamily protein | 815134 | |||
| ath | HEN2 | RNA helicase, ATP-dependent, SK12/DOB1 protein | 815269 | |||
| ath | AT2G15560 | Putative endonuclease or glycosyl hydrolase | 816049 | |||
| ath | ROC3 | rotamase CYP 3 | 816161 | |||
| ath | AT2G17970 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | 816307 | |||
| ath | AT2G18110 | Translation elongation factor EF1B/ribosomal protein S6 family protein | 816323 | |||
| ath | LKP2 | LOV KELCH protein 2 | 816408 | |||
| ath | NOP10 | nucleolar RNA-binding Nop10p family protein | 816569 | |||
| ath | PIA1 | PP2C induced by AVRRPM1 | 816590 | |||
| ath | PAB4 | poly(A) binding protein 4 | 816867 | |||
| ath | eIFiso4G2 | MIF4G domain-containing protein / MA3 domain-containing protein | 816939 | |||
| ath | AT2G25450 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | 817083 | |||
| ath | IQD6 | IQ-domain 6 | 817158 | |||
| ath | SMU2 | RED family protein | 817187 | |||
| ath | AGO4 | Argonaute family protein | 817246 | |||
| ath | SE | C2H2 zinc-finger protein SERRATE (SE) | 817252 | |||
| ath | SKD1 | AAA-type ATPase family protein | 817306 | |||
| ath | AXS1 | UDP-D-apiose/UDP-D-xylose synthase 1 | 817332 | |||
| ath | AT2G29210 | splicing factor PWI domain-containing protein | 817470 | |||
| ath | U2B'' | U2 small nuclear ribonucleoprotein B | 817576 | |||
| ath | GPX2 | glutathione peroxidase 2 | 817715 | |||
| ath | ABS2 | AP2/B3-like transcriptional factor family protein | 818181 | |||
| ath | RS2Z33 | arginine/serine-rich zinc knuckle-containing protein 33 | 818311 | |||
| ath | AGD7 | ARF-GAP domain 7 | 818331 | |||
| ath | AT2G38710 | AMMECR1 family | 818453 | |||
| ath | MYB25 | myb domain protein 25 | 818575 | |||
| ath | LIS | WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-like protein | 818748 | |||
| ath | AT2G42520 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | 818852 | |||
| ath | AT2G43160 | ENTH/VHS family protein | 818918 | |||
| ath | AT2G45220 | Plant invertase/pectin methylesterase inhibitor superfamily | 819130 | |||
| ath | ECT1 | evolutionarily conserved C-terminal region 1 | 819550 | |||
| ath | EMB2016 | embryo defective 2016 | 819736 | |||
| ath | AT3G07300 | NagB/RpiA/CoA transferase-like superfamily protein | 819918 | |||
| ath | AT3G07590 | Small nuclear ribonucleoprotein family protein | 819950 | |||
| ath | AT3G07810 | RNA-binding (RRM/RBD/RNP motifs) family protein | 819972 | |||
| ath | ORP3B | OSBP(oxysterol binding protein)-related protein 3B | 820086 | |||
| ath | AT3G09440 | Heat shock protein 70 (Hsp 70) family protein | 820102 | |||
| ath | EIF3G1 | eukaryotic translation initiation factor 3G1 | 820313 | |||
| ath | HSP70 | heat shock protein 70 | 820438 | |||
| ath | VCR | varicose-like protein | 820529 | |||
| ath | VCS | Transducin/WD40 repeat-like superfamily protein | 820530 | |||
| ath | ECT2 | evolutionarily conserved C-terminal region 2 | 820548 | |||
| ath | SCL30A | SC35-like splicing factor 30A | 820559 | |||
| ath | AT3G13610 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | 820564 | |||
| ath | ATBFRUCT1 | Glycosyl hydrolases family 32 protein | 820591 | |||
| ath | LSM1B | Small nuclear ribonucleoprotein family protein | 820624 | |||
| ath | AT3G14100 | RNA-binding (RRM/RBD/RNP motifs) family protein | 820626 | |||
| ath | AT3G14220 | GDSL-like Lipase/Acylhydrolase superfamily protein | 820640 | |||
| ath | GOX2 | Aldolase-type TIM barrel family protein | 820664 | |||
| ath | TCTP | translationally controlled tumor protein | 820916 | |||
| ath | AT3G02790 | zinc finger (C2H2 type) family protein | 820985 | |||
| ath | AT3G03920 | H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein | 821062 | |||
| ath | PTB1 | polypyrimidine tract-binding protein 1 | 821129 | |||
| ath | VMA10 | vacuolar membrane ATPase 10 | 821130 | |||
| ath | HIR2 | SPFH/Band 7/PHB domain-containing membrane-associated protein family | 821309 | |||
| ath | RBP47B | RNA-binding protein 47B | 821447 | |||
| ath | EIF4A-III | eukaryotic initiation factor 4A-III | 821513 | |||
| ath | MKK5 | MAP kinase kinase 5 | 821676 | |||
| ath | VRN5 | Fibronectin type III domain-containing protein | 822034 | |||
| ath | AT3G26450 | Polyketide cyclase/dehydrase and lipid transport superfamily protein | 822250 | |||
| ath | SDR4 | NAD(P)-binding Rossmann-fold superfamily protein | 822580 | |||
| ath | J3 | DNAJ homologue 3 | 823531 | |||
| ath | CEF | uncharacterized protein | 823559 | |||
| ath | MPK3 | mitogen-activated protein kinase 3 | 823706 | |||
| ath | AT3G47020 | F-box and associated interaction domains-containing protein | 823855 | |||
| ath | AT3G47120 | RNA recognition motif (RRM)-containing protein | 823865 | |||
| ath | SUO | protein SUO | 823960 | |||
| ath | CDC2 | cell division control 2 | 824036 | |||
| ath | SCL30 | SC35-like splicing factor 30 | 824712 | |||
| ath | MYB109 | myb domain protein 109 | 824739 | |||
| ath | AT3G58510 | DEA(D/H)-box RNA helicase family protein | 825020 | |||
| ath | AT3G58560 | DNAse I-like superfamily protein | 825025 | |||
| ath | RS31 | RNA-binding (RRM/RBD/RNP motifs) family protein | 825359 | |||
| ath | AT3G63210 | mediator of aba-regulated dormancy protein (DUF581) | 825496 | |||
| ath | MTA | mRNAadenosine methylase | 826670 | |||
| ath | AZI1 | azelaic acid induced 1 | 826859 | |||
| ath | PRR2 | pinoresinol reductase 2 | 827000 | |||
| ath | SBP2 | selenium-binding protein 2 | 827040 | |||
| ath | PRL1 | pleiotropic regulatory locus 1 | 827272 | |||
| ath | AT4G17270 | Mo25 family protein | 827441 | |||
| ath | EIF4E | eukaryotic translation initiation factor 4E | 827529 | |||
| ath | smB | small nuclear ribonucleoprotein associated protein B | 827792 | |||
| ath | MS5 | Tetratricopeptide repeat (TPR)-like superfamily protein | 827838 | |||
| ath | EMB2770 | pre-mRNA splicing factor-like protein | 827925 | |||
| ath | GSTF2 | glutathione S-transferase PHI 2 | 827931 | |||
| ath | AT4G02840 | Small nuclear ribonucleoprotein family protein | 828163 | |||
| ath | AT4G23670 | Polyketide cyclase/dehydrase and lipid transport superfamily protein | 828467 | |||
| ath | AT4G23680 | Polyketide cyclase/dehydrase and lipid transport superfamily protein | 828468 | |||
| ath | ATR1 | P450 reductase 1 | 828554 | |||
| ath | RS40 | arginine/serine-rich splicing factor 35 | 828654 | |||
| ath | ATRBP45C | RNA-binding (RRM/RBD/RNP motifs) family protein | 828808 | |||
| ath | PPI1 | proton pump interactor 1 | 828859 | |||
| ath | PFN2 | profilin 2 | 829056 | |||
| ath | GGP1 | Class I glutamine amidotransferase-like superfamily protein | 829176 | |||
| ath | RSZ22 | serine/arginine-rich 22 | 829285 | |||
| ath | CCoAOMT1 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 829551 | |||
| ath | PAB2 | poly(A) binding protein 2 | 829557 | |||
| ath | ROC5 | rotamase cyclophilin 5 | 829639 | |||
| ath | AT4G38550 | phospholipase-like protein (PEARLI 4) family protein | 830012 | |||
| ath | ROC1 | rotamase CYP 1 | 830029 | |||
| ath | AT4G39520 | GTP-binding protein-like protein | 830106 | |||
| ath | AT5G06110 | DnaJ and myb-like DNA-binding domain-containing protein | 830498 | |||
| ath | Tudor1 | TUDOR-SN protein 1 | 830626 | |||
| ath | SNRK2.1 | SNF1-related protein kinase 2.1 | 830760 | |||
| ath | FHL | far-red-elongated hypocotyl1-like protein | 830832 | |||
| ath | AT5G10350 | RNA-binding (RRM/RBD/RNP motifs) family protein | 830899 | |||
| ath | HSC70-1 | heat shock cognate protein 70-1 | 831020 | |||
| ath | DCP2 | decapping 2 | 831201 | |||
| ath | AT5G16470 | zinc finger (C2H2 type) family protein | 831508 | |||
| ath | BPA1 | binding partner of acd11 1 | 831547 | |||
| ath | SCL28 | SC35-like splicing factor 28 | 831999 | |||
| ath | SPL7 | squamosa promoter binding protein-like 7 | 832001 | |||
| ath | AT5G19350 | RNA-binding (RRM/RBD/RNP motifs) family protein | 832055 | |||
| ath | SMG7 | Telomerase activating protein Est1 | 832060 | |||
| ath | AT5G19510 | Translation elongation factor EF1B/ribosomal protein S6 family protein | 832071 | |||
| ath | XIK | myosin family protein with Dil | 832171 | |||
| ath | AT5G20890 | TCP-1/cpn60 chaperonin family protein | 832213 | |||
| ath | LARP1a | LA RNA-binding protein | 832242 | |||
| ath | SGS3 | XS domain-containing protein / XS zinc finger domain-containing protein-like protein | 832422 | |||
| ath | COL4 | zinc finger CONSTANS-like protein | 832563 | |||
| ath | GME | GDP-D-mannose 3',5'-epimerase | 833002 | |||
| ath | AT5G35430 | Tetratricopeptide repeat (TPR)-like superfamily protein | 833507 | |||
| ath | AT5G44260 | Zinc finger C-x8-C-x5-C-x3-H type family protein | 834449 | |||
| ath | DCP5-L | decapping 5-like protein | 834569 | |||
| ath | LBA1 | RNA helicase | 834747 | |||
| ath | AT5G49120 | DUF581 family protein, putative (DUF581) | 834971 | |||
| ath | PABN1 | polyadenylate-binding protein 1 | 835186 | |||
| ath | PTB2 | polypyrimidine tract-binding protein 2 | 835399 | |||
| ath | RBP45A | RNA-binding protein 45A | 835581 | |||
| ath | OXS3 | oxidative stress 3 | 835756 | |||
| ath | VIN3 | Fibronectin type III domain-containing protein | 835844 | |||
| ath | FIP1[V] | FIP1[V]-like protein | 835916 | |||
| ath | AT5G58620 | zinc finger (CCCH-type) family protein | 835976 | |||
| ath | ORP3C | OSBP(oxysterol binding protein)-related protein 3C | 836061 | |||
| ath | PIF7 | phytochrome-interacting factor7 | 836248 | |||
| ath | Tudor2 | TUDOR-SN protein 2 | 836300 | |||
| ath | AT5G64120 | Peroxidase superfamily protein | 836533 | |||
| ath | SC35 | serine/arginine-rich splicing factor-like protein, putative | 836541 | |||
| ath | HEN4 | RNA-binding KH domain-containing protein | 836560 | |||
| ath | CPR5 | CPR5 protein | 836617 | |||
| ath | ASN2 | asparagine synthetase 2 | 836625 | |||
| ath | AT5G65260 | RNA-binding (RRM/RBD/RNP motifs) family protein | 836651 | |||
| ath | MEE5 | Ribosomal protein S5/Elongation factor G/III/V family protein | 837131 | |||
| ath | AT1G06960 | RNA-binding (RRM/RBD/RNP motifs) family protein | 837206 | |||
| ath | APX1 | ascorbate peroxidase 1 | 837304 | |||
| ath | DCP1 | decapping 1 | 837357 | |||
| ath | ACLA-3 | ATP-citrate lyase A-3 | 837466 | |||
| ath | AT1G09640 | Translation elongation factor EF1B, gamma chain | 837491 | |||
| ath | HYL1 | dsRNA-binding domain-like superfamily protein | 837498 | |||
| ath | U2A' | U2 small nuclear ribonucleoprotein A | 837505 | |||
| ath | iPGAM1 | Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent | 837507 | |||
| ath | MAGO | mago nashi family protein | 837560 | |||
| ath | RBP45B | RNA-binding (RRM/RBD/RNP motifs) family protein | 837708 | |||
| ath | AT1G12010 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | 837753 | |||
| ath | ERF1-2 | eukaryotic release factor 1-2 | 837850 | |||
| ath | SR45 | arginine/serine-rich 45 | 838230 | |||
| ath | DRG1 | developmentally regulated G-protein 1 | 838320 | |||
| ath | LSM1A | Small nuclear ribonucleoprotein family protein | 838495 | |||
| ath | AT1G03230 | Eukaryotic aspartyl protease family protein | 838532 | |||
| ath | AT1G20220 | Alba DNA/RNA-binding protein | 838610 | |||
| ath | IGMT1 | O-methyltransferase family protein | 838706 | |||
| ath | IGMT2 | O-methyltransferase family protein | 838708 | |||
| ath | IGMT4 | O-methyltransferase family protein | 838709 | |||
| ath | AT1G21580 | Zinc finger C-x8-C-x5-C-x3-H type family protein | 838759 | |||
| ath | UGT85A2 | UDP-glucosyl transferase 85A2 | 838843 | |||
| ath | AT1G23440 | Peptidase C15, pyroglutamyl peptidase I-like protein | 838952 | |||
| ath | RSZ21 | RS-containing zinc finger protein 21 | 838997 | |||
| ath | MLP423 | MLP-like protein 423 | 839014 | |||
| ath | AT1G24510 | TCP-1/cpn60 chaperonin family protein | 839066 | |||
| ath | THO2 | THO2 | 839081 | |||
| ath | DCP5 | decapping 5 | 839152 | |||
| ath | FBR12 | Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein | 839203 | |||
| ath | AT1G02080 | transcription regulator | 839244 | |||
| ath | SR34 | RNA-binding (RRM/RBD/RNP motifs) family protein | 839262 | |||
| ath | GSTF7 | glutathione S-transferase 7 | 839295 | |||
| ath | AT1G01940 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein | 839309 | |||
| ath | SPI | BEACH-DOMAIN HOMOLOG A1 | 839323 | |||
| ath | EFE | ethylene-forming enzyme | 839345 | |||
| ath | AT1G02330 | integrator complex subunit-like protein | 839367 | |||
| ath | AN | NAD(P)-binding Rossmann-fold superfamily protein | 839401 | |||
| ath | GSTF6 | glutathione S-transferase 6 | 839515 | |||
| ath | IMPA-6 | importin alpha isoform 6 | 839517 | |||
| ath | AT1G27020 | plant/protein | 839591 | |||
| ath | NTF2B | nuclear transport factor 2B | 839690 | |||
| ath | eEF-1Bb1 | translation elongation factor EF1B/ribosomal protein S6 family protein | 839903 | |||
| ath | PTB3 | polypyrimidine tract-binding protein 3 | 840918 | |||
| ath | RAB18 | RAB GTPASE HOMOLOG B18 | 840987 | |||
| ath | TRX5 | thioredoxin H-type 5 | 841082 | |||
| ath | RD21A | Granulin repeat cysteine protease family protein | 841122 | |||
| ath | RBP47C | RNA-binding protein 47C | 841157 | |||
| ath | RBP47C' | RNA-binding protein 47C' | 841159 | |||
| ath | AT1G49590 | C2H2 and C2HC zinc fingers superfamily protein | 841383 | |||
| ath | RBP47A | RNA-binding protein 47A | 841384 | |||
| ath | PAB8 | poly(A) binding protein 8 | 841399 | |||
| ath | AT1G50670 | OTU-like cysteine protease family protein | 841489 | |||
| ath | AT1G52100 | Mannose-binding lectin superfamily protein | 841640 | |||
| ath | MUM4 | NAD-dependent epimerase/dehydratase family protein | 841785 | |||
| ath | XRN4 | exoribonuclease 4 | 841891 | |||
| ath | SCL33 | SC35-like splicing factor 33 | 841976 | |||
| ath | AT1G55450 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 841992 | |||
| ath | AT1G55460 | DNA/RNA-binding protein Kin17, conserved region | 841993 | |||
| ath | AT1G56310 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | 842084 | |||
| ath | SVB | plant/protein (Protein of unknown function, DUF538) | 842112 | |||
| ath | AT1G57720 | Translation elongation factor EF1B, gamma chain | 842147 | |||
| ath | emb1220 | pre-mRNA processing ribonucleoprotein binding region-containing protein | 842312 | |||
| ath | AtRZ-1b | RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein | 842359 | |||
| ath | AT1G60900 | U2 snRNP auxilliary factor, large subunit, splicing factor | 842382 | |||
| ath | AT1G61620 | phosphoinositide binding protein | 842458 | |||
| ath | ACO2 | ACC oxidase 2 | 842536 | |||
| ath | Phox2 | Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein | 842537 | |||
| ath | NRS/ER | nucleotide-rhamnose synthase/epimerase-reductase | 842603 | |||
| ath | IMP4 | Ribosomal RNA processing Brix domain protein | 842682 | |||
| ath | EMB25 | DEAD/DEAH box helicase | 843343 | |||
| ath | AT1G72730 | DEA(D/H)-box RNA helicase family protein | 843605 | |||
| ath | SMU1 | transducin family protein / WD-40 repeat family protein | 843707 | |||
| ath | AT1G76010 | Alba DNA/RNA-binding protein | 843932 | |||
| ath | AT1G76400 | Ribophorin I | 843972 | |||
| ath | CML38 | calmodulin-like 38 | 843998 | |||
| ath | RHM1 | rhamnose biosynthesis 1 | 844193 | |||
| ath | LZF1 | light-regulated zinc finger protein 1 | 844196 | |||
| ath | AT1G79090 | topoisomerase II-associated protein | 844250 | |||
| ath | AT3G07030 | Alba DNA/RNA-binding protein | 3768790 |
