GO:0006397 mRNA processing

185 ath genes in this database.
368 gma genes in this database.
211 sly genes in this database.
212 osa genes in this database.
251 zma genes in this database.
329 bra genes in this database.
186 vvi genes in this database.
275 ppo genes in this database.
216 mtr genes in this database.
616 tae genes in this database.
272 hvu genes in this database.
513 ghi genes in this database.
684 bna genes in this database.
143 cre genes in this database.
222 sbi genes in this database.
205 sot genes in this database.
202 cit genes in this database.
225 bdi genes in this database.
391 nta genes in this database.

[QuickGO]

term: mRNA processing
goid: GO:0006397

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Shaded genes do not have GeneChip data. The output was limited up to 10000.
Species Symbol Gene
coexpression		 Locus
page 		Full name* Entrez Gene ID Evidence*
ath EMB2794 Tetratricopeptide repeat (TPR)-like superfamily protein 814746
ath AT2G02570 nucleic acid binding/RNA binding protein 814787 IMP
ath RNEE/G RNAse E/G-like protein 814965
ath HEN2 RNA helicase, ATP-dependent, SK12/DOB1 protein 815269 IMP
ath PFD1 PREFOLDIN 1 815304 ISS
ath OTP51 endonuclease 816078
ath PRORP2 proteinaceous RNase P 2 816166 IMP
ath AT2G16940 Splicing factor, CC1-like protein 816197 IEA
ath GRP7 cold, circadian rhythm, and rna binding 2 816705
ath AT2G28050 Pentatricopeptide repeat (PPR) superfamily protein 817349
ath U2B'' U2 small nuclear ribonucleoprotein B 817576
ath AT2G33730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 817938
ath AT2G35130 Tetratricopeptide repeat (TPR)-like superfamily protein 818079
ath RS2Z33 arginine/serine-rich zinc knuckle-containing protein 33 818311
ath EMB2765 P-loop containing nucleoside triphosphate hydrolases superfamily protein 818459
ath SAC3A SAC3/GANP/Nin1/mts3/eIF-3 p25 family 818519
ath LIS WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-like protein 818748
ath EMB2654 Tetratricopeptide repeat (TPR)-like superfamily protein 818771
ath AT2G43770 Transducin/WD40 repeat-like superfamily protein 818980
ath AT2G43960 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 819001
ath AT2G45620 Nucleotidyltransferase family protein 819170 IMP
ath AT2G47330 P-loop containing nucleoside triphosphate hydrolases superfamily protein 819346 IPI
ath U1A spliceosomal protein U1A 819371
ath PAC pale cress protein (PAC) 819424
ath CLPS3 CLP-similar protein 3 819626 IMP
ath EMB2016 embryo defective 2016 819736 IMP
ath AT3G07790 DGCR14-like protein 819970
ath AT3G07860 Ubiquitin-like superfamily protein 819977
ath HCF152 Tetratricopeptide repeat (TPR)-like superfamily protein 820122 IMP
ath U11/U12-31K RNA recognition motif and CCHC-type zinc finger domains containing protein 820203
ath EMB2769 Cwf15 / Cwc15 cell cycle control family protein 820510
ath SCL30A SC35-like splicing factor 30A 820559
ath LSM1B Small nuclear ribonucleoprotein family protein 820624 IGI
ath AT3G14700 SART-1 family 820698
ath HCF107 high chlorophyll fluorescent 107 820961 IEA,IMP
ath UNE6 LUC7 related protein 821276
ath AT3G18790 pre-mRNA-splicing factor ISY1-like protein 821412
ath EIF4A-III eukaryotic initiation factor 4A-III 821513 IPI
ath PDF2 prefoldin 2 821819 IMP
ath AT3G24730 mRNA splicing factor, thioredoxin-like U5 snRNP 822071
ath AT3G25840 Protein kinase superfamily protein 822178
ath AT3G26020 Protein phosphatase 2A regulatory B subunit family protein 822199
ath AT3G27600 SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein 822382
ath CRR2 Tetratricopeptide repeat (TPR)-like superfamily protein 823832
ath AT3G48120 serine/arginine-rich splicing factor 823967
ath AT3G49130 SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein 824074
ath U1-70K U1 small nuclear ribonucleoprotein-70K 824230
ath CP29 chloroplast RNA-binding protein 29 824514 IPI
ath RS2Z32 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein 824518
ath AT3G53640 Protein kinase superfamily protein 824532
ath MEE40 Pentatricopeptide repeat (PPR) superfamily protein 824537
ath FIP37 FKBP12 interacting protein 37 824584 IMP
ath SUA suppressor of abi3-5 824590 IMP
ath SCL30 SC35-like splicing factor 30 824712
ath AT3G56790 RNA splicing factor-like protein 824846
ath AT3G58560 DNAse I-like superfamily protein 825025 IGI
ath AT3G61360 Tetratricopeptide repeat (TPR)-like superfamily protein 825308
ath RS31 RNA-binding (RRM/RBD/RNP motifs) family protein 825359
ath PCFS4 PCF11P-similar protein 4 825827 IMP
ath EMB1691 Methyltransferase MT-A70 family protein 826589 IMP
ath MTSSB mitochondrially targeted single-stranded DNA binding protein 826707
ath AT4G15640 adenylyl cyclase 827241
ath AT4G16200 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 827313
ath smB small nuclear ribonucleoprotein associated protein B 827792
ath EMB2770 pre-mRNA splicing factor-like protein 827925
ath PRORP3 proteinaceous RNase P 3 828279 IMP,IMP
ath SIC hydroxyproline-rich glycoprotein family protein 828552
ath FC2 LAMMER-type protein kinase AFC2 828576 IDA
ath AT4G25020 D111/G-patch domain-containing protein 828605
ath RS40 arginine/serine-rich splicing factor 35 828654
ath AT4G25550 Cleavage/polyadenylation specificity factor, 25kDa subunit 828660
ath PIRL8 plant intracellular ras group-related LRR 8 828711
ath AT4G28010 Tetratricopeptide repeat (TPR)-like superfamily protein 828915
ath CFIM-25 homolog of CFIM-25 829104
ath RSZ22 serine/arginine-rich 22 829285
ath AT4G32270 Ubiquitin-like superfamily protein 829360
ath AT4G33370 DEA(D/H)-box RNA helicase family protein 829474
ath MRL1 Pentatricopeptide repeat (PPR) superfamily protein 829635 IPI
ath ATU2AF65A U2 snRNP auxilliary factor, large subunit, splicing factor 829822
ath BGAL14 beta-galactosidase 14 830016
ath CCR1 cold, circadian rhythm, and RNA binding 1 830082
ath AT5G04050 RNA-directed DNA polymerase (reverse transcriptase) 830284 IEA
ath AT5G06520 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 830540
ath AT5G06890 Ubiquitin-like superfamily protein 830579
ath Tudor1 TUDOR-SN protein 1 830626 IMP
ath YLS8 mRNA splicing factor, thioredoxin-like U5 snRNP 830725
ath ILP1 GC-rich sequence DNA-binding factor-like protein 830755
ath AT5G08720 polyketide cyclase/dehydrase/lipid transporter 830772
ath AT5G09210 GC-rich sequence DNA-binding factor-like protein 830780
ath AT5G09880 Splicing factor, CC1-like protein 830848 IEA
ath AT5G12280 SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein 831103
ath EMB3011 RNA helicase family protein 831141
ath FY Transducin/WD40 repeat-like superfamily protein 831191 IGI
ath ELF9 RNA binding (RRM/RBD/RNP motifs) family protein 831486
ath DOT2 SART-1 family 831541
ath AT5G17440 LUC7 related protein 831610
ath AT5G01160 RING/U-box superfamily protein 831742 IMP
ath SCL28 SC35-like splicing factor 28 831999
ath AT5G19350 RNA-binding (RRM/RBD/RNP motifs) family protein 832055
ath HUA2 Tudor/PWWP/MBT domain-containing protein 832379 IMP
ath PFD5 prefoldin 5 832393 ISS
ath CPSF100 cleavage and polyadenylation specificity factor 100 832453
ath AT5G25340 Ubiquitin-like superfamily protein 832606
ath EMB976 Tetratricopeptide repeat (TPR)-like superfamily protein 832785
ath AT5G27860 uncharacterized protein 832849
ath AT5G28740 Tetratricopeptide repeat (TPR)-like superfamily protein 832986
ath AT5G39920 pre-mRNA cleavage complex II protein 833989
ath AT5G42310 Pentatricopeptide repeat (PPR-like) superfamily protein 834236
ath AT5G45990 crooked neck protein, putative / cell cycle protein 834639
ath AT5G46920 Intron maturase, type II family protein 834738
ath PFD3 prefoldin 3 835011 ISS
ath AT5G51280 DEAD-box protein abstrakt 835202
ath AT5G51410 LUC7 N terminus domain-containing protein 835215
ath RS41 RNA-binding (RRM/RBD/RNP motifs) family protein 835279
ath AT5G58020 RTF2 RING-finger protein 835914
ath AT5G60940 Transducin/WD40 repeat-like superfamily protein 836215
ath Tudor2 TUDOR-SN protein 2 836300 IMP
ath AT5G62290 nucleotide-sensitive chloride conductance regulator (ICln) family protein 836350
ath AT5G63370 Protein kinase superfamily protein 836456
ath SC35 serine/arginine-rich splicing factor-like protein, putative 836541
ath AT5G64270 splicing factor 836548
ath HEN4 RNA-binding KH domain-containing protein 836560 TAS
ath CDKC2 cyclin dependent kinase group C2 836620 IEP,IMP
ath RHON1 Rho termination factor 837128
ath AT1G07170 PHF5-like protein 837228
ath AIP3 ABI3-interacting protein 3 837400 IMP
ath AT1G09230 RNA-binding (RRM/RBD/RNP motifs) family protein 837443
ath U2A' U2 small nuclear ribonucleoprotein A 837505
ath AT1G10580 Transducin/WD40 repeat-like superfamily protein 837599
ath AT1G12300 Tetratricopeptide repeat (TPR)-like superfamily protein 837784
ath RPF1 RNA processing FACTOR 837825
ath AT1G13350 Protein kinase superfamily protein 837895
ath AT1G14640 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 838026
ath AT1G14650 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 838027
ath SR45 arginine/serine-rich 45 838230
ath STIPL1 GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain-containing protein 838277
ath AT1G17130 coiled-coil protein (DUF572) 838283
ath AT1G18050 SWAP/surp RNA-binding domain protein 838385
ath LSM1A Small nuclear ribonucleoprotein family protein 838495 IGI
ath AT1G20580 Small nuclear ribonucleoprotein family protein 838647
ath emb1507 U5 small nuclear ribonucleoprotein helicase 838690 IMP
ath PAB3 poly(A) binding protein 3 838882 IGI
ath RSZ21 RS-containing zinc finger protein 21 838997
ath AT1G01940 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 839309
ath PRP39 Tetratricopeptide repeat (TPR)-like superfamily protein 839314 IDA
ath AT1G03910 cactus-binding carboxy-terminal, cactin 839371
ath AT1G03140 splicing factor Prp18 family protein 839567
ath AT1G28060 Pre-mRNA-splicing factor 3 839699
ath PFD6 prefoldin 6 839878 IMP
ath nMAT1 Intron maturase, type II family protein 839880
ath CPSF30 cleavage and polyadenylation specificity factor 30 839925
ath DRT111 D111/G-patch domain-containing protein 839927
ath EMB2279 pentatricopeptide (PPR) repeat-containing protein 839941
ath AT1G31870 pre-mRNA-splicing factor of RES complex protein 840077
ath MOS2 D111/G-patch domain-containing protein 840246
ath AT1G54380 spliceosome protein-like protein 841879
ath SCL33 SC35-like splicing factor 33 841976
ath AT1G60200 splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein 842315 IDA,IMP
ath AT1G60900 U2 snRNP auxilliary factor, large subunit, splicing factor 842382
ath AT1G62910 Pentatricopeptide repeat (PPR) superfamily protein 842592
ath RPF3 Tetratricopeptide repeat (TPR)-like superfamily protein 842594 IMP
ath EMB25 DEAD/DEAH box helicase 843343 IMP
ath CSTF64 cleavage stimulating factor 64 843510
ath ESP1 hydroxyproline-rich glycoprotein family protein 843720
ath AT1G74350 Intron maturase, type II family protein 843776
ath SmD3 snRNP core protein SMD3 843963
ath SKIP chromatin protein family 844055
ath AT1G80060 Ubiquitin-like superfamily protein 844346
ath SUS2 Pre-mRNA-processing-splicing factor 844347
ath AT3G44785 Zinc finger C-x8-C-x5-C-x3-H type family protein 2745945
ath U1.5 3766679
ath U12 3767596
ath AT2G29430 coiled-coil protein (DUF572) 3768235
ath U6-26 3768861
ath U2.6 3769727
ath U2.4 3769728
ath U2.2 3769730
ath U2.3 3769731
ath U6acat 3771384
ath U6-29 3771447
ath U2.7 3771548
ath AT2G14285 Small nuclear ribonucleoprotein family protein 5007874
ath U4.2 28718958
ath U6-1 28719273
ath U2.5 28721113


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