GO:0006397 mRNA processing

185 ath genes in this database.
368 gma genes in this database.
211 sly genes in this database.
212 osa genes in this database.
251 zma genes in this database.
329 bra genes in this database.
186 vvi genes in this database.
275 ppo genes in this database.
216 mtr genes in this database.
616 tae genes in this database.
272 hvu genes in this database.
513 ghi genes in this database.
684 bna genes in this database.
143 cre genes in this database.
222 sbi genes in this database.
205 sot genes in this database.
202 cit genes in this database.
225 bdi genes in this database.
391 nta genes in this database.

[QuickGO]

term: mRNA processing
goid: GO:0006397

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Shaded genes do not have GeneChip data. The output was limited up to 10000.
Species Symbol Gene
coexpression		 Locus
page 		Full name* Entrez Gene ID Evidence*
ppo LOC7453655 uncharacterized LOC7453655 7453655 IEA
ppo LOC7453827 splicing factor SF3a60 homolog 7453827
ppo LOC7453862 pre-mRNA-splicing factor SLU7-A 7453862
ppo LOC7454302 transcription elongation factor SPT4 homolog 2 7454302 IEA
ppo LOC7454468 serine/arginine-rich splicing factor RS40 7454468
ppo LOC7454684 protein EARLY FLOWERING 5 7454684
ppo LOC7454862 sm-like protein LSM5 7454862
ppo LOC7454882 splicing factor 3B subunit 6-like protein 7454882
ppo LOC7455185 ATP-dependent RNA helicase DEAH12, chloroplastic 7455185
ppo LOC7455213 THO complex subunit 2 7455213 IEA
ppo LOC7455510 transcription elongation factor SPT4 homolog 2 7455510 IEA
ppo LOC7455620 uncharacterized LOC7455620 7455620
ppo LOC7455653 110 kDa U5 small nuclear ribonucleoprotein component CLO-like 7455653
ppo LOC7455695 pre-mRNA-processing factor 39-1 7455695
ppo LOC7455836 uncharacterized LOC7455836 7455836 IEA
ppo LOC7456257 UPF0400 protein C337.03 7456257
ppo LOC7456307 thioredoxin-like protein YLS8 7456307
ppo LOC7456807 splicing factor U2af large subunit A 7456807 IEA
ppo LOC7457417 U4/U6 small nuclear ribonucleoprotein Prp31 homolog 7457417
ppo LOC7457516 pentatricopeptide repeat-containing protein At2g15820, chloroplastic 7457516
ppo LOC7457519 zinc finger protein ZOP1 7457519
ppo LOC7457708 serine/arginine-rich SC35-like splicing factor SCL33 7457708
ppo LOC7457908 spliceosome-associated protein 130 A 7457908
ppo LOC7458142 serine/arginine-rich SC35-like splicing factor SCL30 7458142
ppo LOC7458229 uncharacterized LOC7458229 7458229
ppo LOC7458440 lariat debranching enzyme 7458440
ppo LOC7458613 spliceosome-associated protein 130 A 7458613
ppo LOC7458663 ubiquitin-like protein 5 7458663
ppo LOC7459056 RNA-binding motif protein 25 7459056 IEA
ppo LOC7459112 uncharacterized LOC7459112 7459112
ppo LOC7459186 uncharacterized LOC7459186 7459186
ppo LOC7459203 septin and tuftelin-interacting protein 1 homolog 1 7459203
ppo LOC7459230 uncharacterized LOC7459230 7459230
ppo LOC7459914 uncharacterized LOC7459914 7459914
ppo LOC7459990 pre-mRNA-processing factor 19 homolog 2 7459990
ppo LOC7460090 serrate RNA effector molecule 7460090 IEA
ppo LOC7460223 uncharacterized LOC7460223 7460223
ppo LOC7460377 uncharacterized LOC7460377 7460377
ppo LOC7460729 uncharacterized LOC7460729 7460729
ppo LOC7461259 ATP-dependent RNA helicase DEAH11, chloroplastic 7461259
ppo LOC7461262 uncharacterized LOC7461262 7461262
ppo LOC7461490 pre-mRNA-processing factor 39-1 7461490
ppo LOC7461580 probable small nuclear ribonucleoprotein F 7461580
ppo LOC7461689 uncharacterized LOC7461689 7461689
ppo LOC7462120 splicing factor U2AF-associated protein 2 7462120
ppo LOC7462473 pre-mRNA-splicing factor SPF27 homolog 7462473 IEA
ppo LOC7462542 probable splicing factor 3A subunit 1 7462542
ppo LOC7463454 U11/U12 small nuclear ribonucleoprotein 31 kDa protein 7463454
ppo LOC7463482 mRNA cap guanine-N7 methyltransferase 2 7463482
ppo LOC7463667 uncharacterized LOC7463667 7463667 IEA
ppo LOC7463792 DNA-damage-repair/toleration protein DRT111, chloroplastic 7463792
ppo LOC7463876 splicing factor 3B subunit 6-like protein 7463876
ppo LOC7463897 sm-like protein LSM5 7463897
ppo LOC7463898 sm-like protein LSM8 7463898
ppo LOC7464596 sm-like protein LSM36B 7464596
ppo LOC7464668 small nuclear ribonucleoprotein SmD1a-like 7464668
ppo LOC7464681 uncharacterized LOC7464681 7464681
ppo LOC7464900 serine/arginine-rich splicing factor RS41 7464900
ppo LOC7465017 uncharacterized LOC7465017 7465017
ppo LOC7465260 probable small nuclear ribonucleoprotein G 7465260
ppo LOC7465490 cleavage stimulation factor subunit 77 7465490
ppo LOC7466274 protein PALE CRESS, chloroplastic 7466274
ppo LOC7467054 DNA-damage-repair/toleration protein DRT111, chloroplastic 7467054
ppo LOC7467445 uncharacterized LOC7467445 7467445
ppo LOC7467542 uncharacterized protein At4g14342 7467542
ppo LOC7467590 serine/arginine-rich splicing factor RS2Z33 7467590
ppo LOC7467821 sm-like protein LSM3B 7467821
ppo LOC7468567 zinc finger CCCH domain-containing protein 25 7468567
ppo LOC7468613 uncharacterized LOC7468613 7468613 IEA
ppo LOC7469039 coilin 7469039
ppo LOC7469218 sm-like protein LSM3B 7469218
ppo LOC7469563 nuclear cap-binding protein subunit 2 7469563
ppo LOC7469837 cell division cycle 5-like protein 7469837
ppo LOC7469865 U11/U12 small nuclear ribonucleoprotein 65 kDa protein 7469865
ppo LOC7470775 uncharacterized LOC7470775 7470775
ppo LOC7470909 mRNA cap guanine-N7 methyltransferase 1 7470909
ppo LOC7471597 uncharacterized LOC7471597 7471597
ppo LOC7471615 organelle RRM domain-containing protein 1, chloroplastic 7471615
ppo LOC7471635 E3 ubiquitin ligase PQT3-like 7471635 IEA
ppo LOC7471740 DEAD-box ATP-dependent RNA helicase 42 7471740
ppo LOC7471891 uncharacterized LOC7471891 7471891
ppo LOC7472468 sm-like protein LSM36B 7472468
ppo LOC7473154 splicing factor U2af large subunit B 7473154 IEA
ppo LOC7473166 U1 small nuclear ribonucleoprotein 70 kDa 7473166
ppo LOC7473194 uncharacterized LOC7473194 7473194
ppo LOC7474390 splicing factor U2AF-associated protein 2 7474390
ppo LOC7474543 splicing factor U2af small subunit B 7474543
ppo LOC7474576 small nuclear ribonucleoprotein SmD3b 7474576
ppo LOC7474827 DEAD-box ATP-dependent RNA helicase 21 7474827
ppo LOC7474920 uncharacterized LOC7474920 7474920
ppo LOC7475011 PHD finger-like domain-containing protein 5A 7475011
ppo LOC7475012 PHD finger-like domain-containing protein 5A 7475012
ppo LOC7475394 uncharacterized protein At4g14342 7475394
ppo LOC7475429 uncharacterized LOC7475429 7475429
ppo LOC7475730 U1 small nuclear ribonucleoprotein C 7475730
ppo LOC7475907 protein pleiotropic regulatory locus 1 7475907
ppo LOC7476231 serine/arginine-rich splicing factor RSZ22A 7476231
ppo LOC7476432 uncharacterized LOC7476432 7476432 IEA
ppo LOC7477107 uncharacterized LOC7477107 7477107
ppo LOC7477109 uncharacterized LOC7477109 7477109
ppo LOC7477768 U2 small nuclear ribonucleoprotein A' 7477768
ppo LOC7477810 SART-1 family protein DOT2 7477810
ppo LOC7478372 uncharacterized LOC7478372 7478372
ppo LOC7478385 protein MLN51 homolog 7478385 IEA
ppo LOC7478630 protein BUD31 homolog 2 7478630
ppo LOC7478673 pre-mRNA-processing protein 40A 7478673
ppo LOC7478709 uncharacterized LOC7478709 7478709
ppo LOC7478754 pre-mRNA-processing protein 40A 7478754
ppo LOC7478843 uncharacterized LOC7478843 7478843
ppo LOC7478910 uncharacterized LOC7478910 7478910
ppo LOC7479200 uncharacterized LOC7479200 7479200
ppo LOC7479272 uncharacterized LOC7479272 7479272
ppo LOC7479601 transcriptional repressor ILP1 7479601
ppo LOC7479640 uncharacterized LOC7479640 7479640
ppo LOC7480090 uncharacterized LOC7480090 7480090 IEA
ppo LOC7480092 sm-like protein LSM7 7480092
ppo LOC7480612 uncharacterized LOC7480612 7480612
ppo LOC7480704 small nuclear ribonucleoprotein SmD1a 7480704
ppo LOC7480732 cleavage stimulating factor 64 7480732
ppo LOC7480750 sm-like protein LSM2 7480750
ppo LOC7480889 pre-mRNA-processing factor 19 homolog 2 7480889
ppo LOC7481827 chloride conductance regulatory protein ICln 7481827
ppo LOC7481998 sm-like protein LSM7 7481998
ppo LOC7482121 serine/arginine-rich splicing factor RS40 7482121
ppo LOC7482145 chloride conductance regulatory protein ICln 7482145
ppo LOC7482274 uncharacterized LOC7482274 7482274 IEA
ppo LOC7482439 cleavage and polyadenylation specificity factor subunit 3-I 7482439
ppo LOC7482440 cleavage and polyadenylation specificity factor subunit 3-I 7482440
ppo LOC7483632 30-kDa cleavage and polyadenylation specificity factor 30 7483632
ppo LOC7484452 protein EARLY FLOWERING 5 7484452
ppo LOC7484720 pre-mRNA-splicing factor SLU7-A 7484720
ppo LOC7485126 uncharacterized LOC7485126 7485126
ppo LOC7485155 suppressor of mec-8 and unc-52 protein homolog 1 7485155
ppo LOC7485208 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 7485208
ppo LOC7485226 FIP1[V]-like protein 7485226 IEA
ppo LOC7485563 uncharacterized LOC7485563 7485563
ppo LOC7485685 uncharacterized LOC7485685 7485685 IEA
ppo LOC7485722 small RNA-binding protein 11, chloroplastic 7485722
ppo LOC7485822 protein high chlorophyll fluorescent 107 7485822 IEA
ppo LOC7486030 uncharacterized LOC7486030 7486030
ppo LOC7486391 probable splicing factor 3A subunit 1 7486391
ppo LOC7486549 protein SICKLE 7486549
ppo LOC7486829 protein COP1 SUPPRESSOR 2 7486829
ppo LOC7487072 cleavage stimulating factor 64 7487072
ppo LOC7487417 SUPPRESSOR OF ABI3-5 7487417
ppo LOC7487514 30-kDa cleavage and polyadenylation specificity factor 30 7487514
ppo LOC7487570 DNA-damage-repair/toleration protein DRT111, chloroplastic 7487570
ppo LOC7487586 uncharacterized LOC7487586 7487586
ppo LOC7487702 cell division cycle 5-like protein 7487702
ppo LOC7487777 probable U6 snRNA-associated Sm-like protein LSm4 7487777
ppo LOC7488856 pre-mRNA-processing protein 40A 7488856
ppo LOC7488937 SNW/SKI-interacting protein 7488937
ppo LOC7489356 uncharacterized LOC7489356 7489356
ppo LOC7489372 uncharacterized LOC7489372 7489372
ppo LOC7489480 110 kDa U5 small nuclear ribonucleoprotein component CLO 7489480
ppo LOC7489610 protein RDM16 7489610
ppo LOC7489651 U11/U12 small nuclear ribonucleoprotein 65 kDa protein 7489651
ppo LOC7489700 uncharacterized LOC7489700 7489700
ppo LOC7489842 splicing factor SF3a60 homolog 7489842
ppo LOC7490080 G patch domain-containing protein TGH 7490080 IEA
ppo LOC7490528 suppressor of mec-8 and unc-52 protein homolog 2 7490528
ppo LOC7490613 U11/U12 small nuclear ribonucleoprotein 25 kDa protein 7490613
ppo LOC7490793 uncharacterized LOC7490793 7490793
ppo LOC7490813 uncharacterized LOC7490813 7490813
ppo LOC7490930 uncharacterized LOC7490930 7490930
ppo LOC7490969 uncharacterized LOC7490969 7490969
ppo LOC7491301 uncharacterized LOC7491301 7491301
ppo LOC7491308 probable U6 snRNA-associated Sm-like protein LSm4 7491308
ppo LOC7491913 protein MOS2 7491913
ppo LOC7491956 serine/arginine-rich splicing factor RS2Z33 7491956
ppo LOC7492130 uncharacterized LOC7492130 7492130
ppo LOC7492248 probable small nuclear ribonucleoprotein G 7492248
ppo LOC7492794 serine/arginine-rich splicing factor RS31 7492794
ppo LOC7492800 U4/U6 small nuclear ribonucleoprotein Prp31 homolog 7492800
ppo LOC7492959 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 7492959
ppo LOC7493407 FIP1[V]-like protein 7493407 IEA
ppo LOC7493486 DEAD-box ATP-dependent RNA helicase 21 7493486
ppo LOC7493893 septin and tuftelin-interacting protein 1 homolog 1 7493893
ppo LOC7493911 THO complex subunit 7A 7493911 IEA
ppo LOC7494037 serine/arginine-rich splicing factor RS41 7494037
ppo LOC7494232 uncharacterized LOC7494232 7494232 IEA
ppo LOC7494417 protein STABILIZED1 7494417
ppo LOC7494696 small nuclear ribonucleoprotein SmD3b 7494696
ppo LOC7494711 serine/threonine-protein kinase/endoribonuclease IRE1b 7494711 IEA
ppo LOC7494729 DEAD-box ATP-dependent RNA helicase 42 7494729
ppo LOC7494732 splicing factor U2af small subunit B 7494732
ppo LOC7494756 uncharacterized LOC7494756 7494756
ppo LOC7494952 ubiquitin-like protein 5 7494952
ppo LOC7495243 U1 small nuclear ribonucleoprotein A 7495243
ppo LOC7496110 U4/U6 small nuclear ribonucleoprotein PRP4-like protein 7496110
ppo LOC7496780 PHD finger-like domain-containing protein 5A 7496780
ppo LOC7497271 serine/arginine-rich splicing factor RS31 7497271
ppo LOC18094007 uncharacterized LOC18094007 18094007
ppo LOC18094055 protein MOS2 18094055
ppo LOC18094222 nuclear intron maturase 2, mitochondrial-like 18094222 IEA
ppo LOC18094602 E3 ubiquitin ligase PQT3-like 18094602 IEA
ppo LOC18094746 protein MLN51 homolog 18094746 IEA
ppo LOC18095012 cleavage and polyadenylation specificity factor subunit 2 18095012
ppo LOC18095770 uncharacterized LOC18095770 18095770
ppo LOC18095870 mRNA cap guanine-N7 methyltransferase 1-like 18095870
ppo LOC18095883 uncharacterized LOC18095883 18095883
ppo LOC18096022 suppressor of mec-8 and unc-52 protein homolog 1 18096022
ppo LOC18096260 protein SICKLE 18096260
ppo LOC18096703 pre-mRNA-processing-splicing factor 8A 18096703
ppo LOC18096927 uncharacterized LOC18096927 18096927
ppo LOC18097234 serine/arginine-rich SC35-like splicing factor SCL33 18097234
ppo LOC18097832 pentatricopeptide repeat-containing protein At2g15820, chloroplastic 18097832
ppo LOC18097968 protein BUD31 homolog 2 18097968
ppo LOC18097994 splicing factor U2af small subunit B 18097994
ppo LOC18098008 uncharacterized LOC18098008 18098008
ppo LOC18098063 serrate RNA effector molecule 18098063 IEA
ppo LOC18098202 ubiquitin-like protein 5 18098202
ppo LOC18098278 sm-like protein LSM2 18098278
ppo LOC18098319 DEAD-box ATP-dependent RNA helicase 35 18098319
ppo LOC18098363 zinc finger CCCH domain-containing protein 5 18098363
ppo LOC18099289 U1 small nuclear ribonucleoprotein 70 kDa 18099289
ppo LOC18099301 splicing factor U2af large subunit B 18099301 IEA
ppo LOC18099398 uncharacterized LOC18099398 18099398
ppo LOC18100001 uncharacterized LOC18100001 18100001
ppo LOC18100077 splicing factor U2af small subunit B 18100077
ppo LOC18100088 uncharacterized LOC18100088 18100088
ppo LOC18100098 cactin 18100098
ppo LOC18100124 uncharacterized LOC18100124 18100124
ppo LOC18100387 zinc finger CCCH domain-containing protein 64 18100387
ppo LOC18100540 uncharacterized LOC18100540 18100540
ppo LOC18100727 serine/arginine-rich splicing factor RSZ22A 18100727
ppo LOC18100947 DNA-damage-repair/toleration protein DRT111, chloroplastic 18100947
ppo LOC18100965 uncharacterized LOC18100965 18100965
ppo LOC18101071 serine/threonine-protein kinase/endoribonuclease IRE1a 18101071 IEA
ppo LOC18101239 uncharacterized LOC18101239 18101239 IEA
ppo LOC18101260 transcriptional repressor ILP1 18101260
ppo LOC18101398 DNA-damage-repair/toleration protein DRT111, chloroplastic 18101398
ppo LOC18101498 uncharacterized LOC18101498 18101498
ppo LOC18101545 RNA-binding motif protein 25 18101545 IEA
ppo LOC18102411 coilin 18102411
ppo LOC18102501 DNA-damage-repair/toleration protein DRT111, chloroplastic 18102501
ppo LOC18102611 FIP1[III]-like protein 18102611 IEA
ppo LOC18103001 splicing factor U2af large subunit A 18103001 IEA
ppo LOC18103443 serine/arginine-rich splicing factor SR45 18103443
ppo LOC18103474 uncharacterized LOC18103474 18103474
ppo LOC18103743 uncharacterized LOC18103743 18103743
ppo LOC18104189 THO complex subunit 7A 18104189 IEA
ppo LOC18104226 uncharacterized LOC18104226 18104226
ppo LOC18104229 THO complex subunit 2 18104229 IEA
ppo LOC18104451 E3 ubiquitin ligase PQT3-like 18104451 IEA
ppo LOC18104497 uncharacterized LOC18104497 18104497
ppo LOC18105660 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 18105660
ppo LOC18105827 uncharacterized LOC18105827 18105827
ppo LOC18106260 uncharacterized LOC18106260 18106260
ppo LOC18106297 uncharacterized LOC18106297 18106297
ppo LOC18106558 SUPPRESSOR OF ABI3-5 18106558
ppo LOC18106795 nuclear cap-binding protein subunit 2 18106795
ppo LOC18106951 U11/U12 small nuclear ribonucleoprotein 35 kDa protein 18106951
ppo LOC18106971 uncharacterized LOC18106971 18106971
ppo LOC18107108 uncharacterized LOC18107108 18107108
ppo LOC18107772 uncharacterized LOC18107772 18107772
ppo LOC18108299 serine/arginine-rich splicing factor RSZ21 18108299
ppo LOC18108997 protein RDM16 18108997
ppo LOC18109761 U2 small nuclear ribonucleoprotein A' 18109761
ppo LOC18109788 U1 small nuclear ribonucleoprotein A 18109788
ppo LOC112323620 polyadenylate-binding protein 2 112323620 IEA
ppo LOC112326780 nuclear intron maturase 2, mitochondrial-like 112326780 IEA
ppo LOC112327186 nuclear intron maturase 1, mitochondrial 112327186 IEA
ppo LOC112327491 nuclear intron maturase 4, mitochondrial 112327491 IEA
ppo LOC112327869 SNW/SKI-interacting protein 112327869
ppo LOC112327903 nuclear intron maturase 3, mitochondrial 112327903 IEA
ppo LOC112328229 cactin 112328229
ppo LOC127903864 PHD finger-like domain-containing protein 5A 127903864
ppo LOC127904126 uncharacterized LOC127904126 127904126 IEA
ppo LOC127904388 DNA-damage-repair/toleration protein DRT111, chloroplastic-like 127904388
ppo LOC127904764 U4/U6 small nuclear ribonucleoprotein Prp31 homolog 127904764
ppo LOC127905363 maturase K 127905363 IEA
ppo LOC127905542 uncharacterized LOC127905542 127905542 IEA
ppo LOC127905683 DNA-damage-repair/toleration protein DRT111, chloroplastic-like 127905683
ppo LOC127905775 DNA-damage-repair/toleration protein DRT111, chloroplastic-like 127905775


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