GO:0006511 ubiquitin-dependent protein catabolic process

219 ath genes in this database.
481 gma genes in this database.
283 sly genes in this database.
308 osa genes in this database.
319 zma genes in this database.
435 bra genes in this database.
244 vvi genes in this database.
340 ppo genes in this database.
368 mtr genes in this database.
881 tae genes in this database.
333 hvu genes in this database.
782 ghi genes in this database.
910 bna genes in this database.
159 cre genes in this database.
251 sbi genes in this database.
284 sot genes in this database.
223 cit genes in this database.
273 bdi genes in this database.
520 nta genes in this database.

[QuickGO]

term: ubiquitin-dependent protein catabolic process
goid: GO:0006511

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Shaded genes do not have GeneChip data. The output was limited up to 10000.
Species Symbol Gene
coexpression		 Locus
page 		Full name* Entrez Gene ID Evidence*
sly COP1 putative E3 ubiquitin-protein ligase COP1 543547
sly Coi1 coronatine-insensitive 1 543911
sly LeMA-1 26S protease regulatory subunit 6A homolog 544089
sly PAD1 proteasome alpha subunit 544128 IEA
sly CUL4 cullin 4 544135 IEA
sly LOC778198 uncharacterized LOC778198 778198
sly EBF1 EIN3-binding F-box protein 1 778234
sly EBF2 EIN3-binding F-box protein 2 778235
sly UBC3 ubiquitin conjugating enzyme 100301932 IEA
sly UBC ubiquitin conjugating enzyme E2 100303774 IEA
sly LOC100316892 TIR1-like protein 100316892
sly LOC100316900 LeTIR 100316900
sly LOC100529127 cullin 1 100529127 IEA
sly LOC101243642 E3 ubiquitin-protein ligase RMA3-like 101243642 IEA
sly LOC101243752 F-box/LRR-repeat protein 3 101243752
sly LOC101243848 F-box protein 7 101243848
sly LOC101243883 macrophage erythroblast attacher 101243883
sly LOC101243944 BTB/POZ domain-containing protein FBL11 101243944
sly LOC101243954 SKP1-like protein 1A 101243954
sly LOC101243987 E3 ubiquitin-protein ligase RSL1-like 101243987 IEA
sly LOC101243993 anaphase-promoting complex subunit 2 101243993 IEA
sly UBC11 E2 ubiquitin-conjugating enzyme 101244060 IEA
sly LOC101244442 plant UBX domain-containing protein 4-like 101244442
sly LOC101244518 probable proteasome inhibitor 101244518
sly LOC101244534 PCI superfamily protein 101244534 IEA
sly LOC101244602 cell division cycle 20.2, cofactor of APC complex 101244602
sly LOC101244826 SKP1-like protein 11 101244826
sly LOC101245325 TOM1-like protein 9 101245325
sly LOC101245359 26S proteasome regulatory subunit 8 homolog A 101245359
sly LOC101245450 vacuolar-sorting protein BRO1-like 101245450
sly LOC101245462 ubiquitin-activating enzyme E1 1 101245462 IEA
sly LOC101245649 26S proteasome regulatory subunit 8 homolog A 101245649
sly LOC101245654 26S proteasome non-ATPase regulatory subunit 13 homolog B 101245654 IEA
sly LOC101245688 F-box/LRR-repeat protein 14 101245688
sly LOC101245757 F-box protein At1g47056 101245757
sly LOC101245767 anaphase-promoting complex subunit 1 101245767
sly LOC101245776 plant UBX domain-containing protein 4 101245776
sly LOC101245875 TOM1-like protein 6 101245875
sly LOC101245889 proteasome subunit alpha type-2-A 101245889 IEA
sly LOC101245941 probable E3 ubiquitin-protein ligase ARI2 101245941 IEA
sly RAD23d ubiquitin receptor RAD23d 101246007
sly LOC101246183 cullin-1 101246183 IEA
sly LOC101246287 SKP1-like protein 1B 101246287
sly LOC101246424 F-box/kelch-repeat protein At1g23390 101246424
sly LOC101246489 uncharacterized LOC101246489 101246489
sly LOC101246572 SKP1-like protein 1B 101246572
sly LOC101246723 E3 ubiquitin ligase SINA3 101246723 IEA
sly LOC101246799 uncharacterized LOC101246799 101246799
sly LOC101246856 E3 ubiquitin-protein ligase UPL6 101246856 IEA
sly LOC101246871 SKP1-like protein 1B 101246871
sly LOC101246898 E3 ubiquitin ligase PARAQUAT TOLERANCE 3-like 101246898 IEA
sly LOC101246942 F-box/LRR-repeat MAX2 homolog A 101246942
sly LOC101246945 26S proteasome regulatory subunit 6A homolog 101246945
sly LOC101246998 F-box protein SKIP2-like 101246998
sly LOC101247093 proteasome subunit alpha type-5 101247093
sly LOC101247231 cullin-1-like 101247231 IEA
sly LOC101247325 E3 ubiquitin-protein ligase SDIR1 101247325 IEA
sly LOC101247432 E3 ubiquitin protein ligase RIN2 101247432 IEA
sly LOC101247472 E3 ubiquitin-protein ligase UPL3 101247472
sly LOC101247473 F-box protein At5g51380-like 101247473
sly CSN3 COP9 signalosome complex subunit 3 101247481 IEA
sly LOC101247495 E3 ubiquitin-protein ligase RSL1 101247495 IEA
sly LOC101247552 uncharacterized LOC101247552 101247552
sly LOC101247556 LEC14B homolog 101247556
sly LOC101247773 F-box protein SKIP2 101247773
sly LOC101247803 ubiquitin-conjugating enzyme E2 2 101247803
sly LOC101247839 proteasome subunit alpha type-2-B 101247839 IEA
sly LOC101247956 E3 ubiquitin-protein ligase listerin 101247956
sly LOC101248129 cullin-1-like 101248129 IEA
sly LOC101248131 uncharacterized LOC101248131 101248131
sly LOC101248399 uncharacterized LOC101248399 101248399 IEA
sly LOC101248419 cullin-1-like 101248419 IEA
sly LOC101248534 probable E3 ubiquitin-protein ligase ARI8 101248534 IEA
sly LOC101248688 NPL4-like protein 2 101248688 IEA
sly LOC101248690 EIN3-binding F-box protein 1 101248690
sly LOC101248694 polyubiquitin 101248694
sly LOC101248725 F-box/LRR-repeat protein 10 101248725
sly LOC101248739 cullin-4 101248739 IEA
sly LOC101248949 E3 ubiquitin-protein ligase RMA3 101248949 IEA
sly LOC101248999 cullin-3A 101248999 IEA
sly LOC101249062 E3 ubiquitin-protein ligase RSL1-like 101249062 IEA
sly LOC101249087 ubiquitin-conjugating enzyme E2-17 kDa 101249087 IEA
sly LOC101249287 26S proteasome non-ATPase regulatory subunit 8 homolog A 101249287
sly LOC101249294 cullin-1 101249294 IEA
sly LOC101249347 E3 ubiquitin-protein ligase RKP 101249347 IEA
sly LOC101249355 uncharacterized LOC101249355 101249355
sly LOC101249374 ubiquitin carboxyl-terminal hydrolase 3 101249374 IEA
sly LOC101249452 ubiquitin receptor RAD23c 101249452
sly LOC101249698 E3 ubiquitin-protein ligase COP1-like 101249698
sly LOC101249757 cullin-1 101249757 IEA
sly LOC101249890 RING-box protein 1a 101249890 IEA
sly LOC101249974 protein RMD5 homolog 101249974
sly LOC101249984 E3 ubiquitin-protein ligase RSL1 101249984 IEA
sly LOC101250078 uncharacterized LOC101250078 101250078
sly cdc20-1 cell division control 20-1 101250197
sly LOC101250202 E3 ubiquitin-protein ligase RSL1 101250202 IEA
sly LOC101250370 proteasome subunit alpha type-6 101250370 IEA
sly LOC101250440 uncharacterized LOC101250440 101250440 IEA
sly LOC101250704 probable E3 ubiquitin-protein ligase ARI7 101250704 IEA
sly LOC101250706 probable E3 ubiquitin-protein ligase RHY1A 101250706 IEA
sly ccs52A protein FIZZY-RELATED 2 101250720
sly LOC101250723 ubiquitin carboxyl-terminal hydrolase 2 101250723 IEA
sly LOC101250739 ubiquitin-conjugating enzyme E2 28 101250739 IEA
sly LOC101250790 E3 ubiquitin-protein ligase RSL1-like 101250790 IEA
sly UBC1 E2 ubiquitin-conjugating enzyme 101250809
sly LOC101250834 E3 ubiquitin-protein ligase UPL7 101250834 IEA
sly LOC101251072 cell division cycle 20.2, cofactor of APC complex-like 101251072
sly LOC101251188 SKP1-like protein 1B 101251188
sly LOC101251292 F-box protein At3g58530 101251292
sly LOC101251301 uncharacterized LOC101251301 101251301 IEA
sly LOC101251321 protein N-terminal asparagine amidohydrolase 101251321 IEA
sly LOC101251343 E3 ubiquitin ligase PQT3-like 101251343 IEA
sly LOC101251515 vacuolar protein sorting-associated protein 36 101251515
sly LOC101251588 E3 ubiquitin-protein ligase RSL1-like 101251588 IEA
sly LOC101251658 ubiquitin carboxyl-terminal hydrolase 6 101251658
sly LOC101251966 ubiquitin receptor RAD23b 101251966
sly LOC101252114 cullin-1-like 101252114 IEA
sly LOC101252199 26S proteasome non-ATPase regulatory subunit 2 homolog A 101252199
sly LOC101252287 ubiquitin-conjugating enzyme E2 10 101252287 IEA
sly LOC101252548 protein AUXIN SIGNALING F-BOX 2 101252548
sly LOC101252989 plant UBX domain-containing protein 4 101252989
sly LOC101253241 RING finger superfamily protein 101253241 IEA
sly LOC101253278 APO protein 4, mitochondrial 101253278
sly LOC101253383 F-box/LRR-repeat protein 12 101253383
sly LOC101253493 uncharacterized LOC101253493 101253493
sly LOC101253514 ubiquitin-conjugating enzyme E2 5 101253514 IEA
sly LOC101253520 ubiquitin-activating enzyme E1 2 101253520 IEA
sly LOC101253544 proteasome subunit alpha type-3 101253544 IEA
sly LOC101253689 LEC14B protein 101253689
sly LOC101253775 TOM1-like protein 3 101253775
sly LOC101253813 anaphase-promoting complex subunit 5 101253813
sly LOC101253831 E3 ubiquitin ligase SINA2 101253831 IEA
sly LOC101253906 EIN3-binding F-box protein 1-like 101253906
sly LOC101253976 E3 ubiquitin-protein ligase RMA1H1-like 101253976 IEA
sly LOC101254012 E3 ubiquitin-protein ligase RMA3-like 101254012 IEA
sly LOC101254242 ubiquitin-conjugating enzyme E2-23 kDa 101254242 IEA
sly LOC101254474 plant UBX domain-containing protein 7 101254474
sly LOC101254567 SUMO-conjugating enzyme UBC9 101254567 IEA
sly LOC101254652 cullin-3A-like 101254652 IEA
sly LOC101254909 E3 ubiquitin-protein ligase CHIP 101254909
sly LOC101254956 BTB/POZ domain-containing protein At4g08455 101254956
sly LOC101254991 F-box protein SKP2B 101254991
sly LOC101255129 E3 ubiquitin-protein ligase PRT6 101255129
sly LOC101255151 uncharacterized LOC101255151 101255151 IEA
sly LOC101255157 ubiquitin domain-containing protein DSK2b 101255157 IEA
sly SSK2 SKP1-like protein 11-like 101255260
sly LOC101255378 WD repeat-containing protein ATCSA-1 101255378
sly LOC101255406 arginyl-tRNA--protein transferase 2 101255406
sly LOC101255444 probable 26S proteasome non-ATPase regulatory subunit 3 101255444 IEA
sly LOC101255534 cullin-1 101255534 IEA
sly SSK3 SKP1-like protein 11-like 101255553
sly LOC101255562 vacuolar protein sorting-associated protein 28 homolog 2-like 101255562
sly LOC101255653 anaphase-promoting complex subunit 4 101255653
sly LOC101255960 uncharacterized LOC101255960 101255960
sly LOC101256141 proteasome subunit alpha type-3 101256141 IEA
sly LOC101256150 SKP1-like protein 1 101256150
sly LOC101256289 E3 ubiquitin-protein ligase SDIR1-like 101256289 IEA
sly LOC101256470 SKP1-like protein 1B 101256470
sly LOC101256571 TOM1-like protein 1 101256571
sly LOC101256619 ubiquitin-conjugating enzyme E2 7 101256619 IEA
sly LOC101256837 uncharacterized LOC101256837 101256837 IEA
sly LOC101257034 proteasome subunit alpha type-4 101257034 IEA
sly LOC101257090 ubiquitin-conjugating enzyme E2 10 101257090 IEA
sly LOC101257146 SKP1-like protein 21 101257146
sly LOC101257237 ubiquitin domain-containing protein DSK2b-like 101257237 IEA
sly LOC101257559 F-box protein At3g12350 101257559
sly SlSINA5 E3 ubiquitin ligase SINA5 101257844 IEA
sly LOC101257890 E3 ubiquitin-protein ligase UPL4 101257890
sly LOC101257937 B-type cell cycle switch protein ccs52A-like 101257937
sly LOC101258121 vacuolar protein sorting-associated protein 28 homolog 2 101258121
sly LOC101258124 ubiquitin receptor RAD23c 101258124
sly LOC101258191 E3 ubiquitin-protein ligase At1g12760 101258191 IEA
sly UBC41 E2 ubiquitin-conjugating enzyme UBC41 101258213
sly LOC101258726 ubiquitin domain-containing protein DSK2b-like 101258726 IEA
sly LOC101258750 26S proteasome non-ATPase regulatory subunit 11 homolog 101258750 IEA
sly LOC101258825 F-box/LRR-repeat MAX2 homolog A-like 101258825
sly SINA4 E3 ubiquitin ligase SINA4 101258961 IEA
sly LOC101258980 stress-associated protein 6 101258980
sly LOC101259014 F-box protein FBW2 101259014
sly LOC101259306 uncharacterized LOC101259306 101259306
sly LOC101259528 proteasome subunit beta type-3-A 101259528
sly LOC101259571 ENTH/VHS/ANTH family protein 101259571
sly LOC101259629 26S proteasome non-ATPase regulatory subunit 14 homolog 101259629
sly LOC101259644 uncharacterized LOC101259644 101259644 IEA
sly LOC101259750 26S proteasome non-ATPase regulatory subunit 1 homolog A 101259750
sly LOC101260121 anaphase-promoting complex subunit 8 101260121
sly ccs52B cell cycle switch 52B 101260349
sly LOC101260503 E3 ubiquitin-protein ligase DIS1 101260503 IEA
sly LOC101260701 cell division cycle protein 27 homolog B 101260701
sly LOC101260872 ubiquitin-conjugating enzyme E2 28 101260872 IEA
sly LOC101260958 TOM1-like protein 9 101260958
sly LOC101261084 vacuolar protein-sorting-associated protein 37 homolog 1 101261084
sly LOC101261163 F-box/LRR-repeat protein 3 101261163
sly LOC101261295 ubiquitin-conjugating enzyme E2-23 kDa 101261295 IEA
sly LOC101261334 cell division cycle 20.2, cofactor of APC complex-like 101261334
sly LOC101261464 26S proteasome non-ATPase regulatory subunit 2 homolog A 101261464
sly LOC101261621 vacuolar-sorting protein BRO1 101261621
sly LOC101261665 probable E3 ubiquitin-protein ligase ARI2 101261665 IEA
sly LOC101261856 26S proteasome non-ATPase regulatory subunit 1 homolog A 101261856
sly LOC101261865 E3 ubiquitin-protein ligase PRT6 101261865
sly LOC101261929 26S proteasome regulatory subunit 6B homolog 101261929
sly LOC101261990 anaphase-promoting complex subunit 6 101261990
sly LOC101262146 probable E3 ubiquitin-protein ligase ARI7 101262146 IEA
sly LOC101262151 E3 ubiquitin-protein ligase PRT1 101262151
sly LOC101262152 E3 ubiquitin-protein ligase RMA1H1 101262152 IEA
sly LOC101262418 ubiquitin-conjugating enzyme E2 7 101262418 IEA
sly MKB1 RING-finger E3 ubiquitin ligase Makibishi 1 101262459 IEA
sly LOC101262710 ubiquitin-conjugating enzyme E2 7 101262710 IEA
sly LOC101262721 ubiquitin-conjugating enzyme E2 7 101262721 IEA
sly LOC101262771 protein GID8 homolog 101262771
sly LOC101262927 26S proteasome regulatory subunit 7 homolog A 101262927
sly LOC101262966 uncharacterized LOC101262966 101262966 IEA
sly LOC101263071 26S proteasome non-ATPase regulatory subunit 4 homolog 101263071
sly LOC101263084 protein GID8 homolog 101263084
sly LOC101263135 uncharacterized LOC101263135 101263135 IEA
sly LOC101263175 uncharacterized LOC101263175 101263175 IEA
sly SlSINA1 E3 ubiquitin ligase SINA1 101263446 IEA
sly LOC101263588 E3 ubiquitin-protein ligase At1g63170-like 101263588 IEA
sly LOC101263708 E3 ubiquitin-protein ligase At1g63170 101263708 IEA
sly LOC101263833 uncharacterized LOC101263833 101263833
sly LOC101263913 SKP1-like protein 21 101263913
sly LOC101263953 uncharacterized LOC101263953 101263953
sly LOC101264127 cullin-1-like 101264127 IEA
sly LOC101264159 E3 ubiquitin ligase SINA6 101264159 IEA
sly LOC101264260 uncharacterized LOC101264260 101264260
sly LOC101264381 SKP1-like protein 11 101264381
sly LOC101264732 F-box/LRR-repeat protein 4 101264732
sly LOC101264776 TOM1-like protein 5 101264776
sly LOC101264841 E3 ubiquitin-protein ligase RMA1H1 101264841 IEA
sly LOC101264868 E3 ubiquitin-protein ligase UPL3 101264868
sly LOC101264951 ubiquitin-conjugating enzyme E2 28 101264951 IEA
sly LOC101264976 26S proteasome non-ATPase regulatory subunit 13 homolog B 101264976 IEA
sly LOC101265008 ubiquitin domain-containing protein DSK2b 101265008 IEA
sly LOC101265051 ubiquitin-conjugating enzyme E2 10 101265051 IEA
sly LOC101265083 E3 ubiquitin-protein ligase SINAT2 101265083 IEA
sly LOC101265447 E3 ubiquitin-protein ligase RSL1-like 101265447 IEA
sly LOC101265499 ubiquitin-conjugating enzyme E2 10 101265499 IEA
sly LOC101265760 vacuolar protein sorting-associated protein 25 101265760
sly LOC101265795 ubiquitin-conjugating enzyme E2 2 101265795
sly LOC101265808 F-box protein At5g51370-like 101265808
sly LOC101265863 ubiquitin-conjugating enzyme E2-23 kDa 101265863 IEA
sly LOC101266269 anaphase-promoting complex subunit 11 101266269
sly LOC101266271 vacuolar protein sorting-associated protein 22 homolog 1 101266271
sly LOC101266470 vacuolar protein-sorting-associated protein 37 homolog 1 101266470
sly LOC101266633 proteasome subunit alpha type-1-A 101266633 IEA
sly LOC101266742 proteasome subunit alpha type-5 101266742
sly LOC101267038 DNA repair protein RAD7-like 101267038
sly LOC101267195 anaphase-promoting complex subunit 10 101267195
sly LOC101267277 E3 ubiquitin-protein ligase RSL1-like 101267277 IEA
sly LOC101267293 uncharacterized LOC101267293 101267293 IEA
sly LOC101267337 putative 26S proteasome subunit 101267337
sly LOC101267378 F-box protein At5g67140 101267378
sly LOC101267617 26S proteasome regulatory subunit 4 homolog A 101267617
sly LOC101267619 26S proteasome non-ATPase regulatory subunit 6 homolog 101267619
sly LOC101267784 uncharacterized LOC101267784 101267784
sly LOC101267899 uncharacterized LOC101267899 101267899 IEA
sly LOC101267944 uncharacterized LOC101267944 101267944 IEA
sly LOC101268040 SKP1-like protein 1A 101268040
sly LOC101268289 26S proteasome regulatory subunit 6B homolog 101268289
sly LOC101268302 E3 ubiquitin ligase PQT3-like 101268302 IEA
sly SKP1 S-phase kinase-associated protein 1 101268328
sly LOC101268371 26S proteasome regulatory subunit 7 homolog A 101268371
sly LOC101268382 uncharacterized LOC101268382 101268382
sly LOC101268459 probable E3 ubiquitin-protein ligase ARI2 101268459 IEA
sly LOC101268896 ubiquitin carboxyl-terminal hydrolase 3-like 101268896 IEA
sly LOC104644318 ubiquitin domain-containing protein DSK2b-like 104644318 IEA
sly LOC104644543 ubiquitin domain-containing protein 7SL RNA1-like 104644543
sly LOC104646216 E3 ubiquitin protein ligase RIE1-like 104646216 IEA
sly LOC104648919 F-box protein At3g58530-like 104648919
sly LOC109119090 uncharacterized LOC109119090 109119090 IEA
sly LOC109119473 ubiquitin domain-containing protein DSK2b-like 109119473 IEA
sly LOC109119475 ubiquitin domain-containing protein DSK2b-like 109119475 IEA
sly LOC109119476 ubiquitin domain-containing protein DSK2b-like 109119476 IEA
sly LOC112940981 ubiquitin domain-containing protein DSK2b-like 112940981 IEA
sly LOC138337028 F-box/LRR-repeat protein 4-like 138337028
sly LOC138342131 ubiquitin domain-containing protein DSK2b-like 138342131 IEA
sly LOC138342132 ubiquitin domain-containing protein DSK2b-like 138342132 IEA
sly LOC138342133 ubiquitin domain-containing protein DSK2b-like 138342133 IEA
sly LOC138342137 ubiquitin domain-containing protein DSK2b-like 138342137 IEA
sly LOC138342139 ubiquitin domain-containing protein DSK2b-like 138342139 IEA
sly LOC138342302 ubiquitin domain-containing protein DSK2b-like 138342302 IEA
sly LOC138342304 ubiquitin domain-containing protein DSK2b-like 138342304 IEA
sly LOC138347737 E3 ubiquitin protein ligase RIE1-like 138347737 IEA


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