GO:0005654 nucleoplasm

253 ath genes in this database.

[QuickGO]

term: nucleoplasm
goid: GO:0005654

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Shaded genes do not have GeneChip data. The output was limited up to 10000.
Species Symbol Gene
coexpression		 Locus
page 		Full name* Entrez Gene ID Evidence*
ath AT2G03470 ELM2 domain-containing protein 814876
ath NRPB6B RNA polymerase Rpb6 815006
ath ELF8 binding protein 815177
ath HEN2 RNA helicase, ATP-dependent, SK12/DOB1 protein 815269 IDA
ath NRPB3 DNA-directed RNA polymerase family protein 816035
ath EMB2762 CCAAT-binding factor 816230 IDA
ath AT2G17930 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain-containing protein 816303
ath AT2G18220 Noc2p family 816337 IDA
ath PPa2 pyrophosphorylase 2 816338 IDA
ath APC10 anaphase promoting complex 10 816345
ath PHYB phytochrome B 816394
ath LKP2 LOV KELCH protein 2 816408
ath FVE Transducin family protein / WD-40 repeat family protein 816471
ath AT2G19730 Ribosomal L28e protein family 816492 IDA
ath NOP10 nucleolar RNA-binding Nop10p family protein 816569
ath IQD6 IQ-domain 6 817158
ath SMU2 RED family protein 817187
ath AGO4 Argonaute family protein 817246 IDA
ath SE C2H2 zinc-finger protein SERRATE (SE) 817252
ath U2B'' U2 small nuclear ribonucleoprotein B 817576 IDA
ath AT2G31580 tRNAHis guanylyltransferase 817716 IDA
ath ATX1 homologue of trithorax 817721
ath AT2G32320 tRNAHis guanylyltransferase 817793 IDA
ath COP1 Transducin/WD40 repeat-like superfamily protein 817857
ath GIK Putative AT-hook DNA-binding family protein 818094 IDA
ath SWC2 DNA binding protein SWC2 818246
ath RS2Z33 arginine/serine-rich zinc knuckle-containing protein 33 818311
ath MYB25 myb domain protein 25 818575
ath NRPD1B nuclear RNA polymerase D1B 818591
ath AT2G40430 Nop53 protein 818636 IDA,ISS
ath AT2G40620 Basic-leucine zipper (bZIP) transcription factor family protein 818657 IDA
ath LIS WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-like protein 818748
ath AT2G42780 transcription elongation factor B polypeptide 818878
ath AT2G44770 ELMO/CED-12 family protein 819086 IDA
ath AT2G46040 ARID/BRIGHT AND ELM2 DNA-binding domain-containing protein 819212
ath SPA1 SPA (suppressor of phyA-105) protein family 819242
ath PPa3 pyrophosphorylase 3 819299 IDA
ath AT2G47210 myb-like transcription factor family protein 819334
ath AT2G47820 arginine-glutamic acid dipeptide repeat protein 819394
ath AT3G05430 Tudor/PWWP/MBT superfamily protein 819708
ath EMB2016 embryo defective 2016 819736 IDA
ath AT3G05830 spindle pole body component-like protein 819752 IDA
ath CHR11 chromatin-remodeling protein 11 819814
ath AT3G06670 binding protein 819852
ath AT3G07590 Small nuclear ribonucleoprotein family protein 819950
ath OBE1 potyvirus VPg interacting protein (DUF1423) 819969 IDA
ath AT3G07930 DNA glycosylase superfamily protein 819984 IDA
ath AT3G09670 Tudor/PWWP/MBT superfamily protein 820124
ath BZIP28 Basic-leucine zipper (bZIP) transcription factor family protein 820249 IDA
ath AT3G11100 sequence-specific DNA binding transcription factor 820281 IDA
ath ARP5 actin-related protein 5 820416 IDA
ath PIE1 SNF2 domain-containing protein / helicase domain-containing protein 820463
ath SCL30A SC35-like splicing factor 30A 820559
ath AT3G14750 structural maintenance of chromosomes domain protein 820703
ath ERF4 ethylene responsive element binding factor 4 820752
ath NRPB9A RNA polymerases M/15 Kd subunit 820954
ath TDX tetraticopeptide domain-containing thioredoxin 821056
ath MBD9 methyl-CPG-binding domain 9 821132
ath SNL1 SIN3-like 1 821265
ath AT3G02160 Bromodomain transcription factor 821295
ath AT3G18210 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 821348 IDA
ath VRN1 AP2/B3-like transcriptional factor family protein 821432 IDA
ath HAF2 histone acetyltransferase of the TAFII250 family 2 821437
ath KRP6 KIP-related protein 6 821449 IDA
ath EIF4A-III eukaryotic initiation factor 4A-III 821513 IDA
ath RBL Transducin/WD40 repeat-like superfamily protein 821658
ath NRPB5 Eukaryotic rpb5 RNA polymerase subunit family protein 821801
ath PHP PLANT HOMOLOGOUS TO PARAFIBROMIN 821831
ath VRN5 Fibronectin type III domain-containing protein 822034
ath ATL5 ribosomal protein L5 822138 IDA
ath AT3G27100 transcription/mRNA export factor 822329 IDA,IDA
ath AT3G27860 Tudor/PWWP/MBT superfamily protein 822406
ath HMG high mobility group 822505
ath ARP6 actin-related protein 6 823150
ath AT3G47120 RNA recognition motif (RRM)-containing protein 823865
ath WDR5a Transducin/WD40 repeat-like superfamily protein 824128
ath NRPB11 DNA-directed RNA polymerase, RBP11-like protein 824372
ath AtCDC48B ATPase, AAA-type, CDC48 protein 824489 IDA
ath PPa4 pyrophosphorylase 4 824530 IDA
ath AT3G55350 PIF / Ping-Pong family of plant transposase 824701
ath SCL30 SC35-like splicing factor 30 824712
ath RBL Noc2p family 824716 IDA
ath MYB109 myb domain protein 109 824739
ath NRPB8B RNA polymerase Rpb8 825129
ath AT3G60260 ELMO/CED-12 family protein 825197 IDA
ath SDG14 SET domain protein 14 825347
ath RS31 RNA-binding (RRM/RBD/RNP motifs) family protein 825359
ath MBD4 methyl-CPG-binding domain 4 825478
ath AT3G63270 nuclease 825502
ath CRY1 cryptochrome 1 826470
ath SPT16 global transcription factor C 826665
ath MTA mRNAadenosine methylase 826670
ath AT4G11400 ARID/BRIGHT DNA-binding, ELM2 domain and myb-like DNA-binding domain-containing protein 826744
ath AHL1 AT-hook motif nuclear-localized protein 1 826816 IDA
ath AT4G15890 binding protein 827271 IDA
ath PRL1 pleiotropic regulatory locus 1 827272
ath NRPB9B RNA polymerases M/15 Kd subunit 827321
ath FCA flowering time control protein FCA 827323
ath smB small nuclear ribonucleoprotein associated protein B 827792 IDA
ath B160 protein B160 827895
ath EMB2770 pre-mRNA splicing factor-like protein 827925
ath PPa5 pyrophosphorylase 5 827962 IDA
ath AT4G00810 60S acidic ribosomal protein family 828004 IDA
ath AT4G02840 Small nuclear ribonucleoprotein family protein 828163
ath NRPB2 DNA-directed RNA polymerase family protein 828259
ath HIP1 HSP70-interacting protein 1 828363
ath MBD1 methyl-CPG-binding domain 1 828371
ath SIC hydroxyproline-rich glycoprotein family protein 828552
ath AT4G24970 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein 828599 IDA
ath RS40 arginine/serine-rich splicing factor 35 828654
ath SDG16 SET domain protein 16 828904
ath NFC5 nucleosome/chromatin assembly factor group C5 829094
ath VIP3 Transducin/WD40 repeat-like superfamily protein 829105
ath RSZ22 serine/arginine-rich 22 829285
ath La1 La protein 1 829408 IDA
ath TAF8 TBP-associated factor 8 829584
ath NRPB1 RNA polymerase II large subunit 829734
ath AT4G36080 phosphotransferases/inositol or phosphatidylinositol kinase 829764
ath ATU2AF65A U2 snRNP auxilliary factor, large subunit, splicing factor 829822 IDA
ath HD1 histone deacetylase 1 829969
ath KTF1 kow domain-containing transcription factor 1 830308 IDA
ath AT5G08450 zinc finger CCCH domain protein 830744
ath FHL far-red-elongated hypocotyl1-like protein 830832
ath NRPB4 RNA polymerase II, Rpb4, core protein 830853
ath AT5G10350 RNA-binding (RRM/RBD/RNP motifs) family protein 830899
ath YUC4 Flavin-binding monooxygenase family protein 831003 IDA
ath ABAP1 ARMADILLO BTB protein 1 831145
ath DRM2 domains rearranged methyltransferase 2 831315 IDA
ath SNL2 SIN3-like 2 831354
ath AT5G15570 Bromodomain transcription factor 831410
ath AT5G02950 Tudor/PWWP/MBT superfamily protein 831728
ath AT5G02520 dentin sialophosphoprotein-like protein 831892 IDA
ath AT5G02530 RNA-binding (RRM/RBD/RNP motifs) family protein 831923 IDA
ath SCL28 SC35-like splicing factor 28 831999
ath SPL7 squamosa promoter binding protein-like 7 832001
ath RIN1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 832293
ath COL4 zinc finger CONSTANS-like protein 832563
ath AT5G26770 myosin heavy chain, cardiac protein 832735 IDA
ath AT5G27650 Tudor/PWWP/MBT superfamily protein 832827
ath MBD02 methyl-CPG-binding domain protein 02 833487
ath SEF HIT-type Zinc finger family protein 833676
ath ALY4 ALWAYS EARLY 4 833750 IDA
ath AT5G40340 Tudor/PWWP/MBT superfamily protein 834032
ath NRPB12 DNA directed RNA polymerase, 7 kDa subunit 834103
ath AT5G41190 RNA-binding NOB1-like protein 834121 IDA
ath RPS10B RNA binding Plectin/S10 domain-containing protein 834154 IDA
ath GAS41 YEATS family protein 834599
ath AT5G47700 60S acidic ribosomal protein family 834821 IDA
ath SLD5 DNA replication protein-like protein 834960
ath AT5G50780 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein 835150 IDA
ath PABN1 polyadenylate-binding protein 1 835186
ath AT5G51300 splicing factor-like protein 835204 IDA
ath NRPB6A RNA polymerase Rpb6 835269
ath RS41 RNA-binding (RRM/RBD/RNP motifs) family protein 835279
ath RCF3 RNA-binding KH domain-containing protein 835386
ath SDG29 SET domain group 29 835424
ath OXS3 oxidative stress 3 835756
ath VIN3 Fibronectin type III domain-containing protein 835844
ath FIP1[V] FIP1[V]-like protein 835916
ath ROS3 RNA-binding (RRM/RBD/RNP motifs) family protein 835925 IDA
ath NRPB7 DNA-directed RNA polymerase II 836036
ath AT5G59230 transcription factor-like protein 836041
ath ZEU1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 836063 IDA
ath AT5G59950 RNA-binding (RRM/RBD/RNP motifs) family protein 836117 IDA
ath HDA05 histone deacetylase 5 836227
ath VIP4 leo1-like family protein 836236
ath PIF7 phytochrome-interacting factor7 836248
ath HDA6 histone deacetylase 6 836431
ath SC35 serine/arginine-rich splicing factor-like protein, putative 836541
ath HEN4 RNA-binding KH domain-containing protein 836560
ath CPR5 CPR5 protein 836617
ath CDKC2 cyclin dependent kinase group C2 836620
ath AT5G65260 RNA-binding (RRM/RBD/RNP motifs) family protein 836651
ath AT5G65530 Protein kinase superfamily protein 836679 IDA
ath AT5G67630 P-loop containing nucleoside triphosphate hydrolases superfamily protein 836899
ath AT1G05410 CDPK adapter, putative (DUF1423) 837042
ath ATX2 trithorax-like protein 2 837093
ath MEE5 Ribosomal protein S5/Elongation factor G/III/V family protein 837131
ath AT1G06960 RNA-binding (RRM/RBD/RNP motifs) family protein 837206 ISS
ath AT1G07470 Transcription factor IIA, alpha/beta subunit 837259
ath AT1G07480 Transcription factor IIA, alpha/beta subunit 837262
ath AMI1 amidase 1 837418 IDA
ath AT1G09040 arginine-glutamic acid dipeptide repeat protein 837425
ath AT1G09050 arginine-glutamic acid dipeptide repeat protein 837426
ath AT1G09060 JmjC domain protein JMJ24 837427
ath AT1G09470 myosin heavy chain, cardiac protein 837470 IDA
ath PHYA phytochrome A 837483
ath HYL1 dsRNA-binding domain-like superfamily protein 837498
ath U2A' U2 small nuclear ribonucleoprotein A 837505 IDA
ath MAGO mago nashi family protein 837560 HDA
ath SNL6 paired amphipathic helix Sin3-like protein 837584
ath PYM partner of Y14-MAGO 837682 IDA
ath NRPB10 RNA polymerases N / 8 kDa subunit 837690
ath AT1G11950 Transcription factor jumonji (jmjC) domain-containing protein 837747
ath LINC2 nuclear matrix constituent protein-like protein 837882 IDA
ath AT1G13880 ELM2 domain-containing protein 837947
ath SR45 arginine/serine-rich 45 838230 IDA
ath ARP4 actin-related protein 4 838425
ath TTN10 GINS complex protein 838490
ath AT1G20910 ARID/BRIGHT DNA-binding domain-containing protein 838684
ath AT1G21580 Zinc finger C-x8-C-x5-C-x3-H type family protein 838759
ath GI gigantea protein (GI) 838883 IDA
ath AT1G22950 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 838902 IDA
ath RSZ21 RS-containing zinc finger protein 21 838997
ath SNL3 SIN3-like 3 839032
ath THO2 THO2 839081
ath TPX2 targeting protein for XKLP2 839140 IMP
ath SR34 RNA-binding (RRM/RBD/RNP motifs) family protein 839262
ath GTF2H2 general transcription factor II H2 839332
ath AT1G02330 integrator complex subunit-like protein 839367
ath AT1G01100 60S acidic ribosomal protein family 839410 IDA
ath RRP4 ribosomal RNA processing 4 839521 IDA
ath CRY2 cryptochrome 2 839529
ath DCL1 dicer-like 1 839574
ath PPa1 pyrophosphorylase 1 839579 IDA
ath ATU2AF35A U2 snRNP auxiliary factor small subunit 839657 IDA
ath AT1G28060 Pre-mRNA-splicing factor 3 839699 IDA
ath AT1G31240 Bromodomain transcription factor 840012
ath AT1G31660 bystin-like protein 840053 IDA
ath AT1G49590 C2H2 and C2HC zinc fingers superfamily protein 841383
ath TRO TRAUCO 841570
ath Y14 RNA-binding (RRM/RBD/RNP motifs) family protein 841576 HDA
ath NRPB8A RNA polymerase Rpb8 841866
ath AT1G54440 Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein 841886 IDA
ath AT1G55050 uncharacterized protein 841948
ath SCL33 SC35-like splicing factor 33 841976
ath AT1G55460 DNA/RNA-binding protein Kin17, conserved region 841993
ath MTR4 RNA helicase, ATP-dependent, SK12/DOB1 protein 842269 IDA
ath SNL5 SIN3-like 5 842283
ath emb1220 pre-mRNA processing ribonucleoprotein binding region-containing protein 842312
ath AtRZ-1b RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein 842359
ath AT1G60900 U2 snRNP auxilliary factor, large subunit, splicing factor 842382
ath VIP5 plus-3 domain-containing protein 842395
ath AT1G61620 phosphoinositide binding protein 842458
ath NRPD1A nuclear RNA polymerase D1A 842605 IDA
ath IMP4 Ribosomal RNA processing Brix domain protein 842682
ath AS2 Lateral organ boundaries (LOB) domain family protein 842873 IDA
ath AT1G66260 RNA-binding (RRM/RBD/RNP motifs) family protein 842943 IDA
ath AT1G67170 sarcolemmal membrane-associated protein 843037
ath LINC1 little nuclei1 843043 IDA
ath ASY1 DNA-binding HORMA family protein 843058 IDA
ath LINC3 little nuclei3 843210 IDA
ath AT1G72390 nuclear receptor coactivator 843571
ath EDA25 CCAAT-binding factor 843576 IDA
ath SMU1 transducin family protein / WD-40 repeat family protein 843707
ath SmD3 snRNP core protein SMD3 843963
ath AT1G76510 ARID/BRIGHT DNA-binding domain-containing protein 843984
ath LZF1 light-regulated zinc finger protein 1 844196
ath AT1G79150 binding protein 844256 IDA
ath ELF7 hydroxyproline-rich glycoprotein family protein 844312
ath La2 RNA recognition motif (RRM)-containing protein 844327 ISS
ath PSF1 partner of SLD five 1 844359
ath FHY1 far-red elongated hypocotyl 1 5007942


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