KEGG 00906 Carotenoid biosynthesis

32  ath genes in this database.
72  gma genes in this database.
39  sly genes in this database.
40  osa genes in this database.
50  zma genes in this database.
54  bra genes in this database.
39  vvi genes in this database.
54  ppo genes in this database.
45  mtr genes in this database.
107  tae genes in this database.
40  hvu genes in this database.
92  ghi genes in this database.
106  bna genes in this database.
13  cre genes in this database.
39  sbi genes in this database.
40  sot genes in this database.
40  cit genes in this database.
35  bdi genes in this database.
74  nta genes in this database.

List of genes in ath


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
817157 S, Y CYP711A1 cytochrome P450, family 711, subfamily A, polypeptide 1
817257 O, N AAO3 abscisic aldehyde oxidase 3
817457 S, C CYP707A2 cytochrome P450, family 707, subfamily A, polypeptide 2
819107 C, N CCD7 carotenoid cleavage dioxygenase 7
819647 C, C ZDS zeta-carotene desaturase
820185 O, Y LYC lycopene cyclase
820667 C, C NCED3 nine-cis-epoxycarotenoid dioxygenase 3
821461 S, C CYP707A4 cytochrome P450, family 707, subfamily A, polypeptide 4
821696 O, N LBO1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
822008 M, C_M NCED6 nine-cis-epoxycarotenoid dioxygenase 6
824479 C, C LUT1 Cytochrome P450 superfamily protein
827061 C, C PDS3 phytoene desaturase 3
827562 O, C NCED2 nine-cis-epoxycarotenoid dioxygenase 2
827655 C, C NCED4 nine-cis-epoxycarotenoid dioxygenase 4
827663 S, C CYP707A1 cytochrome P450, family 707, subfamily A, polypeptide 1
828675 C, C BETA-OHASE 1 beta-hydroxylase 1
829417 C, C CCD8 carotenoid cleavage dioxygenase 8
829799 O, N AT4G36470 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
831587 C, C PSY PHYTOENE SYNTHASE
834570 S, C CYP707A3 cytochrome P450, family 707, subfamily A, polypeptide 3
835334 C, C BETA-OHASE 2 beta-carotene hydroxylase 2
835806 C, C LUT2 Lycopene beta/epsilon cyclase protein
836838 C, C ABA1 zeaxanthin epoxidase (ZEP) (ABA1)
837193 O, Y CRTISO carotenoid isomerase
837377 O, Y NPQ1 non-photochemical quenching 1
837626 C, C Z-ISO 15-cis-zeta-carotene isomerase
838334 M, N D27 beta-carotene isomerase D27-like protein
839889 C, N NCED5 nine-cis-epoxycarotenoid dioxygenase 5
840067 C, C CYP97A3 cytochrome P450, family 97, subfamily A, polypeptide 3
841665 O, Y ABA2 NAD(P)-binding Rossmann-fold superfamily protein
841670 S, V BGLU18 beta glucosidase 18
844175 O, C NCED9 nine-cis-epoxycarotenoid dioxygenase 9


List of genes in gma


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
547758 C, C BCH3 beta-carotene hydroxylase BCH3
547970 C, C PDS1 phytoene desaturase
100127420 C, C LOC100127420 15-cis-phytoene desaturase, chloroplastic/chromoplastic
100170649 O, K SABATH1 salicylic acid methyl transferase-like protein
100170674 S, C LOC100170674 abscisic acid 8'-hydroxylase
100776502 C, C LOC100776502 zeta-carotene desaturase, chloroplastic/chromoplastic
100776503 C, C LOC100776503 phytoene synthase, chloroplastic-like
100776690 O, C LOC100776690 phytoene synthase 2, chloroplastic
100777166 C, C LOC100777166 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic
100777875 C, Y LOC100777875 probable carotenoid cleavage dioxygenase 4, chloroplastic
100778086 S, C LOC100778086 abscisate beta-glucosyltransferase
100778118 O, C LOC100778118 violaxanthin de-epoxidase, chloroplastic-like
100778602 M, C LOC100778602 zeaxanthin epoxidase, chloroplastic
100779087 S, C LOC100779087 cytochrome P450 711A1
100779810 S, C LOC100779810 abscisic acid 8'-hydroxylase CYP707A2
100779978 S, C LOC100779978 abscisic acid 8'-hydroxylase CYP707A1
100780284 C, X LOC100780284 probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic-like
100780737 S, C CYP707A1A abscisic acid 8'-hydroxylase CYP707A2
100780770 C, C CYP97C10 protein LUTEIN DEFICIENT 5, chloroplastic
100780932 O, C LOC100780932 phytoene synthase, chloroplastic-like
100781113 O, Y LOC100781113 abscisic-aldehyde oxidase
100781659 O, Y LOC100781659 abscisic-aldehyde oxidase
100782394 C, C LOC100782394 phytoene synthase 2, chloroplastic
100782541 S, C LOC100782541 abscisic acid 8'-hydroxylase 2
100782912 O, C LOC100782912 beta-carotene isomerase D27, chloroplastic
100783830 O, Y LOC100783830 lycopene beta cyclase, chloroplastic
100785152 O, Y LOC100785152 protein SRG1
100785541 C, C BCH2 beta-carotene hydroxylase BCH2
100786428 S, C LOC100786428 abscisic acid 8'-hydroxylase CYP707A2
100786658 O, C LOC100786658 xanthoxin dehydrogenase
100786911 O, C LOC100786911 phytoene synthase 2, chloroplastic
100788180 C, C LOC100788180 lycopene epsilon cyclase, chloroplastic
100790686 C, C LOC100790686 lycopene epsilon cyclase, chloroplastic
100791400 C, C LOC100791400 protein LUTEIN DEFICIENT 5, chloroplastic
100793868 S, C LOC100793868 abscisic acid 8'-hydroxylase 4
100793910 C, C LOC100793910 15-cis-zeta-carotene isomerase
100794831 O, Y CCD8 carotenoid cleavage dioxygenase
100795056 C, X LOC100795056 carotenoid cleavage dioxygenase 7, chloroplastic
100795360 C, C LOC100795360 capsanthin/capsorubin synthase, chromoplastic
100797221 C, C LOC100797221 carotene epsilon-monooxygenase, chloroplastic
100797803 S, P LOC100797803 cytochrome P450 711A1
100797882 C, C NCED2 9-cis-epoxycarotenoid dioxygenase 2
100798275 C, C LOC100798275 prolycopene isomerase, chloroplastic
100798525 S, Y LOC100798525 abscisic acid 8'-hydroxylase CYP707A1
100800186 C, C ZEP zeaxanthin epoxidase
100801691 O, C LOC100801691 xanthoxin dehydrogenase
100802219 C, X CCD7 carotenoid cleavage dioxygenase 7
100802778 C, C BCH4 beta-carotene hydroxylase 4
100803324 C, C LOC100803324 carotene epsilon-monooxygenase, chloroplastic
100805689 S, C LOC100805689 cytochrome P450 711A1
100806350 S, C LOC100806350 abscisic acid 8'-hydroxylase 4
100807446 S, C LOC100807446 abscisic acid 8'-hydroxylase CYP707A2
100807453 C, C LOC100807453 phytoene synthase 2, chloroplastic
100808297 S, Y LOC100808297 cytochrome P450 711A1
100810895 O, Y LOC100810895 lycopene beta cyclase, chloroplastic
100811518 C, C LOC100811518 phytoene synthase 2, chloroplastic
100811616 C, C LOC100811616 prolycopene isomerase, chloroplastic
100811700 O, N LOC100811700 abscisate beta-glucosyltransferase
100812604 O, E LOC100812604 abscisic-aldehyde oxidase
100813368 M, C BCH5 beta-carotene hydroxylase 5
100813404 O, C LOC100813404 beta-carotene isomerase D27, chloroplastic
100814148 C, C LOC100814148 carotenoid cleavage dioxygenase 8 homolog B, chloroplastic
100814399 C, C LOC100814399 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic
100814646 M, C LOC100814646 beta-carotene isomerase D27, chloroplastic
100815135 S, P LOC100815135 abscisic acid 8'-hydroxylase CYP707A1
100815146 O, C LOC100815146 abscisate beta-glucosyltransferase
100816085 M, C LOC100816085 violaxanthin de-epoxidase, chloroplastic-like
100816122 C, C LOC100816122 zeta-carotene desaturase, chloroplastic/chromoplastic
100817119 C, C LOC100817119 phytoene synthase 2, chloroplastic
100820171 O, Y LOC100820171 zeaxanthin epoxidase, chloroplastic-like
100820290 O, Y LOC100820290 protein SRG1
100820507 C, C LOC100820507 15-cis-zeta-carotene isomerase, chloroplastic


List of genes in sly


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
543629 C, C zds zeta-carotene desaturase
543649 C, C NSY lycopene beta-cyclase, chromoplastic
543650 O, N AO1 aldehyde oxidase
543651 O, N TAO2 aldehyde oxidase
543652 O, N TAO3 aldehyde oxidase
543696 C, C VDE violaxanthin de-epoxidase
543964 O, C PSY2 phytoene synthase 2, chloroplastic
543988 C, C Psy1 phytoene synthase 1, chloroplastic
544073 C, C pds phytoene desaturase
544104 O, C LCY1 lycopene beta-cyclase
544129 C, C CrtL-e-1 lycopene epsilon-cyclase
544133 C, C CrtR-b1 beta-carotene hydroxylase
544162 C, M ZEP zeaxanthin epoxidase, chloroplastic
544163 C, M NCED1 9-cis-epoxycarotenoid dioxygenase
544297 C, M CrtR-b2 beta-carotene hydroxylase
100136887 S, K CYP707A1 abscisic acid 8'-hydroxylase CYP707A1
100313501 C, M CCD7 carotenoid cleavage dioxygenase 7
100316877 C, C NCED2 9-cis-epoxycarotenoid dioxygenase 2
100322875 C, C CYP97A29 cytochrome P450-type monooxygenase 97A29
100322877 C, C CYP97C11 cytochrome P450-type monooxygenase 97C11
101246826 C, C LOC101246826 9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic
101249565 S, C CYP707A2 abscisic acid 8'-hydroxylase CYP707A2
101250328 O, Y LOC101250328 ABA aldehyde oxidase
101250535 C, C LOC101250535 probable carotenoid cleavage dioxygenase 4, chloroplastic
101250828 O, C LOC101250828 probable carotenoid cleavage dioxygenase 4, chloroplastic
101253762 C, C Z-ISO 15-cis-zeta-carotene isomerase
101254297 O, Y LOC101254297 (+)-borneol dehydrogenase 2
101254591 O, Y LOC101254591 xanthoxin dehydrogenase
101254620 O, Y LOC101254620 carotenoid cleavage dioxygenase 8, chloroplastic-like
101254720 S, C LOC101254720 abscisic acid 8'-hydroxylase 3
101254924 S, C LOC101254924 cytochrome P450 711A1
101256252 O, N LOC101256252 abscisic-aldehyde oxidase-like
101265985 O, K LOC101265985 probable methyltransferase TCM_000336
101266560 O, M LOC101266560 beta-carotene isomerase D27, chloroplastic
101266767 S, N LOC101266767 abscisic acid 8'-hydroxylase 4
101266862 O, Y LOC101266862 protein LATERAL BRANCHING OXIDOREDUCTASE 1
101267662 O, E LOC101267662 lycopene beta cyclase, chloroplastic
101267734 C, C LOC101267734 phytoene synthase 3
101267857 O, Y CRTISO prolycopene isomerase, chloroplastic


List of genes in osa


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
4324196 C, C LOC4324196 lycopene epsilon cyclase, chloroplastic
4326177 C, C LOC4326177 carotenoid cleavage dioxygenase 8 homolog B, chloroplastic
4326792 O, Y LOC4326792 protein LATERAL BRANCHING OXIDOREDUCTASE 1
4326926 S, C LOC4326926 cytochrome P450 711A1
4326929 S, C LOC4326929 cytochrome P450 711A1
4326930 O, Y LOC4326930 probable methyltransferase TCM_000336
4327933 C, C LOC4327933 carotenoid cleavage dioxygenase 8 homolog A, chloroplastic-like
4328572 C, C LOC4328572 lycopene beta cyclase, chloroplastic
4328761 O, C LOC4328761 cytochrome P450 711A1
4330451 C, C LOC4330451 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic-like
4331152 C, C LOC4331152 protein LUTEIN DEFICIENT 5, chloroplastic
4331460 M, C LOC4331460 beta-carotene hydroxylase 2, chloroplastic
4331854 C, C LOC4331854 15-cis-phytoene desaturase, chloroplastic/chromoplastic
4333566 M, C LOC4333566 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic-like
4334535 C, Y LOC4334535 zerumbone synthase
4335625 M, C LOC4335625 violaxanthin de-epoxidase, chloroplastic
4335984 C, Y LOC4335984 zeaxanthin epoxidase, chloroplastic-like
4336591 C, C LOC4336591 carotenoid cleavage dioxygenase 7, chloroplastic-like
4336753 C, C LOC4336753 beta-carotene hydroxylase 2, chloroplastic
4341325 M, C LOC4341325 cytochrome P450 711A1
4342137 C, Y LOC4342137 phytoene synthase 2, chloroplastic
4342424 C, C LOC4342424 9-cis-epoxycarotenoid dioxygenase NCED4, chloroplastic
4342479 O, C LOC4342479 indole-3-acetaldehyde oxidase
4342680 C, C LOC4342680 zeta-carotene desaturase, chloroplastic/chromoplastic
4342930 S, N LOC4342930 putative aldehyde oxidase-like protein
4342932 O, Y LOC4342932 probable aldehyde oxidase 4
4345810 S, C LOC4345810 abscisic acid 8'-hydroxylase 2-like
4347261 S, C LOC4347261 abscisic acid 8'-hydroxylase 3-like
4347813 C, C LOC4347813 phytoene synthase 2, chloroplastic
4349224 M, C LOC4349224 beta-carotene hydroxylase 2, chloroplastic
4349290 C, C LOC4349290 carotene epsilon-monooxygenase, chloroplastic
4350758 M, C LOC4350758 prolycopene isomerase 1, chloroplastic
4352042 C, C LOC4352042 15-cis-zeta-carotene isomerase, chloroplastic
4352125 C, C LOC4352125 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic-like
4352846 C, C LOC4352846 phytoene synthase 2, chloroplastic
9269315 O, C LOC9269315 cytochrome P450 711A1
9269675 S, C LOC9269675 abscisic acid 8'-hydroxylase 1-like
9270250 C, C LOC9270250 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic-like
107275747 M, C LOC107275747 probable methyltransferase TCM_000336
107276001 C, C LOC107276001 beta-carotene isomerase D27, chloroplastic


List of genes in zma


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
542329 C, C LOC542329 phytoene desaturase
542604 C, C LOC542604 zeta carotene desaturase candidate
542686 C, C LOC542686 phytoene synthase 2
732775 C, C LOC732775 beta-carotene hydroxylase
732819 C, C LOC732819 viviparous14
732825 C, C LOC732825 beta-carotene hydroxylase
100136882 C, C LOC100136882 yellow endosperm 1
100191697 S, C LOC100191697 uncharacterized LOC100191697
100194203 C, C LOC100194203 15-cis-zeta-carotene isomerase, chloroplastic
100273156 M, C LOC100273156 uncharacterized LOC100273156
100273597 O, C LOC100273597 putative cytochrome P450 superfamily protein
100274595 S, C LOC100274595 uncharacterized LOC100274595
100277925 C, C LOC100277925 uncharacterized LOC100277925
100279319 S, C LOC100279319 putative cytochrome P450 superfamily protein
100280091 O, Y LOC100280091 uncharacterized LOC100280091
100280448 C, C LOC100280448 uncharacterized LOC100280448
100281136 C, C LOC100281136 uncharacterized LOC100281136
100281366 M, C LOC100281366 violaxanthin de-epoxidase
100281391 C, C LOC100281391 uncharacterized LOC100281391
100281663 M, C LOC100281663 carotenoid isomerase 2
100281693 M, C LOC100281693 beta-carotene hydroxylase
100281747 M, C LOC100281747 carotenoid isomerase
100281774 M, C LOC100281774 taxane 13-alpha-hydroxylase
100282128 O, Y LOC100282128 uncharacterized LOC100282128
100285076 O, Y LOC100285076 zeaxanthin epoxidase
100383002 M, C LOC100383002 pink scutellum 1
100383693 S, C LOC100383693 putative cytochrome P450 superfamily protein
100384384 O, C LOC100384384 uncharacterized LOC100384384
100501444 M, Y LOC100501444 9-cis-epoxycarotenoid dioxygenase 1, chloroplastic-like
100501454 C, C LOC100501454 nine-cis-epoxycarotenoid dioxygenase6
100502521 C, C LOC100502521 uncharacterized LOC100502521
100502522 C, C LOC100502522 uncharacterized LOC100502522
103626043 C, C LOC103626043 9-cis-epoxycarotenoid dioxygenase 1, chloroplastic-like
103627610 M, C LOC103627610 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic
103627895 C, C LOC103627895 protein LUTEIN DEFICIENT 5, chloroplastic
103631225 M, C LOC103631225 beta-carotene 3-hydroxylase, chloroplastic
103631977 C, C LOC103631977 indole-3-acetaldehyde oxidase-like
103634160 O, Y LOC103634160 9-cis-epoxycarotenoid dioxygenase NCED4, chloroplastic-like
103634451 C, C LOC103634451 9-cis-epoxycarotenoid dioxygenase NCED4, chloroplastic
103637620 C, C LOC103637620 carotene epsilon-monooxygenase, chloroplastic
103641704 C, C_M LOC103641704 zeaxanthin epoxidase, chloroplastic
103643016 O, Y LOC103643016 salicylate carboxymethyltransferase
103647484 S, C LOC103647484 abscisic acid 8'-hydroxylase 3
103648116 C, C LOC103648116 beta-carotene isomerase D27, chloroplastic
103648268 C, C LOC103648268 9-cis-epoxycarotenoid dioxygenase NCED4, chloroplastic
103649702 O, Y LOC103649702 salicylate carboxymethyltransferase
103649703 S, C LOC103649703 uncharacterized LOC103649703
103652265 C, C LOC103652265 9-cis-epoxycarotenoid dioxygenase NCED4, chloroplastic
103653298 S, C LOC103653298 abscisic acid 8'-hydroxylase 3-like
109940986 M, C LOC109940986 phytoene synthase 3, chloroplastic-like


List of genes in bra


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
103827806 S, C LOC103827806 abscisic acid 8'-hydroxylase 3
103828685 M, C LOC103828685 9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic
103829545 O, C LOC103829545 zeaxanthin epoxidase, chloroplastic
103832319 O, N LOC103832319 9-cis-epoxycarotenoid dioxygenase NCED9, chloroplastic
103832798 O, C LOC103832798 xanthoxin dehydrogenase
103833794 C, C LOC103833794 protein LUTEIN DEFICIENT 5, chloroplastic
103834110 C, C LOC103834110 probable carotenoid cleavage dioxygenase 4, chloroplastic
103835193 C, C LOC103835193 15-cis-phytoene desaturase, chloroplastic/chromoplastic
103835211 O, N LOC103835211 protein SRG1
103835514 O, Y LOC103835514 salicylate carboxymethyltransferase
103835539 O, K LOC103835539 salicylate carboxymethyltransferase
103837729 C, C LOC103837729 zeaxanthin epoxidase, chloroplastic
103839129 S, C LOC103839129 abscisic acid 8'-hydroxylase 3
103840429 C, C LOC103840429 probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic
103842019 C, C LOC103842019 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic
103843494 C, C LOC103843494 prolycopene isomerase, chloroplastic
103843711 M, C LOC103843711 beta-carotene isomerase D27, chloroplastic
103844746 C, C LOC103844746 beta-carotene 3-hydroxylase 2, chloroplastic
103845139 C, C LOC103845139 lycopene epsilon cyclase, chloroplastic
103846262 C, C LOC103846262 phytoene synthase, chloroplastic
103849152 C, C LOC103849152 zeta-carotene desaturase, chloroplastic/chromoplastic
103849374 S, C LOC103849374 abscisic acid 8'-hydroxylase 2
103850280 C, C LOC103850280 carotene epsilon-monooxygenase, chloroplastic
103850421 C, C LOC103850421 carotenoid cleavage dioxygenase 8, chloroplastic
103851090 C, C LOC103851090 phytoene synthase, chloroplastic
103853125 C, C LOC103853125 9-cis-epoxycarotenoid dioxygenase NCED9, chloroplastic
103853629 S, C LOC103853629 abscisic acid 8'-hydroxylase 3
103856237 C, C LOC103856237 phytoene synthase, chloroplastic
103856252 O, C LOC103856252 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic
103856778 C, C LOC103856778 lycopene epsilon cyclase, chloroplastic
103857159 C, C LOC103857159 probable carotenoid cleavage dioxygenase 4, chloroplastic
103857276 S, C LOC103857276 abscisic acid 8'-hydroxylase 1
103858373 S, P LOC103858373 cytochrome P450 711A1
103859576 C, C LOC103859576 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic-like
103859803 S, C LOC103859803 abscisic acid 8'-hydroxylase 4
103860984 O, C LOC103860984 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic
103861043 M, C LOC103861043 abscisic acid 8'-hydroxylase 1
103861586 C, C BCH beta-carotene 3-hydroxylase 1, chloroplastic
103862473 O, Y LOC103862473 salicylate carboxymethyltransferase-like
103863442 C, C LOC103863442 beta-carotene 3-hydroxylase 1, chloroplastic
103863556 C, C PDS 15-cis-phytoene desaturase, chloroplastic/chromoplastic
103864755 O, Y LOC103864755 abscisic-aldehyde oxidase
103866186 C, C LOC103866186 carotenoid cleavage dioxygenase 7, chloroplastic
103867926 O, N LOC103867926 salicylate carboxymethyltransferase
103868505 S, V LOC103868505 beta-D-glucopyranosyl abscisate beta-glucosidase
103869174 O, Y LOC103869174 protein SRG1
103869474 S, C LOC103869474 abscisic acid 8'-hydroxylase 4
103870025 C, M LOC103870025 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic
103870482 O, Y LOC103870482 lycopene beta cyclase, chloroplastic
103871211 S, V LOC103871211 beta-D-glucopyranosyl abscisate beta-glucosidase
103871215 O, Y LOC103871215 xanthoxin dehydrogenase
103871599 S, C LOC103871599 violaxanthin de-epoxidase, chloroplastic
103871859 C, C LOC103871859 15-cis-zeta-carotene isomerase, chloroplastic
117126611 O, C LOC117126611 zeaxanthin epoxidase, chloroplastic


List of genes in vvi


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
100232875 C, M BCH1 beta-carotene hydroxylase
100232942 C, C NCED1 9-cis-epoxycarotenoid dioxygenase 1
100232943 C, C NCED2 9-cis-epoxycarotenoid dioxygenase 2
100232944 O, C ZEP zeaxanthin epoxidase
100240685 M, C PDS1 phytoene desaturase
100240996 O, C LOC100240996 protein LUTEIN DEFICIENT 5, chloroplastic
100241069 O, Y LOC100241069 probable methyltransferase TCM_000336
100242750 C, C LOC100242750 carotenoid cleavage dioxygenase 7, chloroplastic
100243621 C, C LOC100243621 carotene epsilon-monooxygenase, chloroplastic
100243924 S, Y LOC100243924 cytochrome P450 711A1
100244362 C, C LOC100244362 9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic
100245154 C, C LOC100245154 zeta-carotene desaturase, chloroplastic/chromoplastic
100245540 S, C LOC100245540 abscisic acid 8'-hydroxylase CYP707A1
100246195 O, N LOC100246195 phytoene synthase 2, chloroplastic
100246737 C, C LOC100246737 capsanthin/capsorubin synthase, chromoplast
100246968 O, C LOC100246968 abscisic acid 8'-hydroxylase 4
100248565 M, C LOC100248565 abscisate beta-glucosyltransferase-like
100250765 C, C LOC100250765 carotenoid cleavage dioxygenase 8 homolog B, chloroplastic
100251100 C, C LOC100251100 probable carotenoid cleavage dioxygenase 4, chloroplastic
100252133 O, C LOC100252133 lycopene beta cyclase, chloroplastic
100252385 C, C LOC100252385 phytoene synthase 2, chloroplastic
100252859 C, C LOC100252859 probable carotenoid cleavage dioxygenase 4, chloroplastic
100254497 C, C LOC100254497 probable carotenoid cleavage dioxygenase 4, chloroplastic
100255199 O, Y LOC100255199 abscisic-aldehyde oxidase
100257861 S, C HYD3 abscisic acid 8'-hydroxylase 3-like
100257865 C, Y LOC100257865 violaxanthin de-epoxidase, chloroplastic
100257960 O, C LOC100257960 zeaxanthin epoxidase, chloroplastic
100258367 C, C LOC100258367 15-cis-zeta-carotene isomerase, chloroplastic
100259482 C, C LECY1 lycopene epsilon cyclase, chloroplastic-like
100260462 S, C LOC100260462 abscisic acid 8'-hydroxylase 2
100262162 C, C LOC100262162 phytoene synthase 2, chloroplastic
100263198 O, Y LOC100263198 protein SRG1
100263250 O, C LOC100263250 prolycopene isomerase, chloroplastic
100264783 S, C HYD2 hypodontia, autosomal recessive (2)
100265098 O, N LOC100265098 abscisic-aldehyde oxidase
100265470 O, Y LOC100265470 (+)-borneol dehydrogenase 2
100267042 O, N LOC100267042 abscisic-aldehyde oxidase
100268009 C, M LOC100268009 beta-carotene hydroxylase 2, chloroplastic
100853223 M, C LOC100853223 beta-carotene isomerase D27, chloroplastic


List of genes in ppo


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
7457533 M, C LOC7457533 abscisic acid 8'-hydroxylase 4
7457714 C, C LOC7457714 phytoene synthase 2, chloroplastic
7458943 O, C LOC7458943 lycopene beta cyclase, chloroplastic/chromoplastic
7460121 O, N LOC7460121 zeaxanthin 7,8(7',8')-cleavage dioxygenase, chromoplastic
7461370 C, C LOC7461370 phytoene synthase 2, chloroplastic
7462030 C, C LOC7462030 15-cis-phytoene desaturase, chloroplastic/chromoplastic
7462440 S, E LOC7462440 15-cis-phytoene desaturase, chloroplastic/chromoplastic
7462609 C, C LOC7462609 zeaxanthin epoxidase, chloroplastic
7462884 S, C LOC7462884 abscisic acid 8'-hydroxylase CYP707A1
7462922 C, Y LOC7462922 carotenoid cleavage dioxygenase 8 homolog B, chloroplastic
7463709 S, P LOC7463709 cytochrome P450 711A1
7464659 C, C LOC7464659 phytoene synthase 2, chloroplastic
7465099 S, C LOC7465099 abscisic acid 8'-hydroxylase 2
7466321 C, C LOC7466321 15-cis-zeta-carotene isomerase, chloroplastic
7468341 C, C LOC7468341 beta-carotene hydroxylase 2, chloroplastic
7468629 S, C LOC7468629 abscisic acid 8'-hydroxylase 2
7470691 S, P LOC7470691 cytochrome P450 711A1
7470743 C, C LOC7470743 carotenoid cleavage dioxygenase 8 homolog B, chloroplastic
7472358 C, C LOC7472358 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic
7473341 C, C LOC7473341 zeta-carotene desaturase, chloroplastic/chromoplastic
7474648 C, C LOC7474648 violaxanthin de-epoxidase, chloroplastic
7475370 O, Y LOC7475370 protein SRG1
7477718 C, C LOC7477718 protein LUTEIN DEFICIENT 5, chloroplastic
7478577 C, C LOC7478577 capsanthin/capsorubin synthase, chromoplastic
7479294 C, C LOC7479294 beta-carotene hydroxylase 2, chloroplastic
7479491 C, C LOC7479491 prolycopene isomerase, chloroplastic
7480715 C, C LOC7480715 phytoene synthase 2, chloroplastic
7487015 O, Y LOC7487015 (+)-borneol dehydrogenase 2
7488070 C, C LOC7488070 prolycopene isomerase, chloroplastic
7489733 C, C LOC7489733 zeaxanthin epoxidase, chloroplastic
7493195 C, C LOC7493195 9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic
7494613 C, C LOC7494613 probable carotenoid cleavage dioxygenase 4, chloroplastic
7495493 O, C LOC7495493 probable methyltransferase TCM_000336
7496096 O, Y LOC7496096 lycopene beta cyclase, chloroplastic/chromoplastic
7497045 C, M LOC7497045 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic
18094985 M, C LOC18094985 zeaxanthin epoxidase, chloroplastic
18095516 C, C LOC18095516 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic
18096146 M, C LOC18096146 beta-carotene isomerase D27, chloroplastic
18097235 C, C LOC18097235 phytoene synthase 2, chloroplastic-like
18097786 S, C LOC18097786 abscisic acid 8'-hydroxylase 4
18098019 O, N LOC18098019 abscisic-aldehyde oxidase
18098070 C, C LOC18098070 capsanthin/capsorubin synthase, chromoplastic
18098425 S, C LOC18098425 abscisic acid 8'-hydroxylase CYP707A2
18098943 C, C LOC18098943 zeta-carotene desaturase, chloroplastic/chromoplastic
18100110 C, C LOC18100110 carotene epsilon-monooxygenase, chloroplastic
18100367 C, C LOC18100367 lycopene epsilon cyclase, chloroplastic
18102197 C, C LOC18102197 zeaxanthin 7,8(7',8')-cleavage dioxygenase, chromoplastic
18102202 O, Y LOC18102202 indole-3-acetaldehyde oxidase
18104892 S, C LOC18104892 abscisic acid 8'-hydroxylase CYP707A1
18105151 C, C LOC18105151 carotenoid cleavage dioxygenase 7, chloroplastic
18106473 C, C LOC18106473 beta-carotene hydroxylase 2, chloroplastic
18106554 O, C LOC18106554 phytoene synthase 2, chloroplastic
112327632 C, C LOC112327632 probable carotenoid cleavage dioxygenase 4, chloroplastic
112327644 M, C LOC112327644 beta-carotene isomerase D27, chloroplastic


List of genes in mtr


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
11408134 C, C LOC11408134 capsanthin/capsorubin synthase, chromoplastic
11408584 C, C LOC11408584 zeaxanthin epoxidase, chloroplastic
11409428 C, C LOC11409428 probable carotenoid cleavage dioxygenase 4, chloroplastic
11409691 C, C LOC11409691 protein LUTEIN DEFICIENT 5, chloroplastic
11413490 C, C LOC11413490 probable carotenoid cleavage dioxygenase 4, chloroplastic
11414529 S, C LOC11414529 abscisic acid 8'-hydroxylase CYP707A1
11414690 O, Y LOC11414690 xanthoxin dehydrogenase
11415276 S, C LOC11415276 cytochrome P450 711A1
11415565 S, C LOC11415565 abscisic acid 8'-hydroxylase CYP707A2
11415648 C, C LOC11415648 zeta-carotene desaturase, chloroplastic/chromoplastic
11416550 O, C LOC11416550 probable carotenoid cleavage dioxygenase 4, chloroplastic
11417046 C, C LOC11417046 neoxanthin synthase, chloroplastic
11419142 O, C LOC11419142 lycopene beta cyclase, chloroplastic/chromoplastic
11419279 O, C LOC11419279 zeaxanthin epoxidase, chloroplastic
11421788 C, C LOC11421788 phytoene synthase 2, chloroplastic
11423389 C, Y LOC11423389 carotenoid cleavage dioxygenase 8 homolog B, chloroplastic
11424160 C, C LOC11424160 beta-carotene hydroxylase 2, chloroplastic
11426660 O, K LOC11426660 probable methyltransferase TCM_000336
11426744 C, C LOC11426744 phytoene synthase 2, chloroplastic
11429551 C, C LOC11429551 carotene epsilon-monooxygenase, chloroplastic
11429816 O, C LOC11429816 violaxanthin de-epoxidase, chloroplastic
11430619 O, N LOC11430619 abscisic-aldehyde oxidase
11430637 S, Y LOC11430637 cytochrome P450 711A1
11431387 O, N LOC11431387 indole-3-acetaldehyde oxidase
11432737 C, C LOC11432737 15-cis-phytoene desaturase, chloroplastic/chromoplastic
11436315 C, C LOC11436315 15-cis-zeta-carotene isomerase, chloroplastic
11437285 C, C LOC11437285 phytoene synthase 2, chloroplastic
11437558 C, C LOC11437558 15-cis-zeta-carotene isomerase, chloroplastic
11438775 C, C LOC11438775 lycopene epsilon cyclase, chloroplastic
11438975 C, C LOC11438975 carotenoid cleavage dioxygenase 7, chloroplastic
11440521 S, S LOC11440521 abscisic acid 8'-hydroxylase CYP707A2
11444685 S, C LOC11444685 abscisic acid 8'-hydroxylase 4
11445728 S, C LOC11445728 abscisic acid 8'-hydroxylase 4
25482830 S, C LOC25482830 abscisic acid 8'-hydroxylase 2
25483622 C, C LOC25483622 prolycopene isomerase, chloroplastic
25485781 O, C LOC25485781 beta-carotene isomerase D27, chloroplastic-like
25487063 C, C LOC25487063 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic
25488175 C, Y LOC25488175 protein SRG1
25490580 M, C LOC25490580 phytoene synthase 2, chloroplastic
25496443 M, C LOC25496443 beta-carotene hydroxylase 2, chloroplastic
25498599 O, Y LOC25498599 carotenoid cleavage dioxygenase 8 homolog B, chloroplastic
25499185 M, C LOC25499185 beta-carotene isomerase D27, chloroplastic-like
112421126 O, Y LOC112421126 abscisate beta-glucosyltransferase
120577445 C, C LOC120577445 zeaxanthin epoxidase, chloroplastic
120577706 C, C LOC120577706 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic


List of genes in tae


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
542859 C, C LOC542859 violaxanthin de-epoxidase, chloroplastic
542878 O, E LOC542878 zeaxanthin epoxidase, chloroplastic
100037655 C, C LOC100037655 15-cis-phytoene desaturase, chloroplastic/chromoplastic
100270658 M, C LOC100270658 zeta-carotene desaturase, chloroplastic/chromoplastic
100415846 C, C LOC100415846 beta-carotene 3-hydroxylase, chloroplastic
100682449 S, C LOC100682449 abscisic acid 8'-hydroxylase 3
101290666 C, C LOC101290666 lycopene beta cyclase, chloroplastic
123041264 C, C LOC123041264 9-cis-epoxycarotenoid dioxygenase NCED4, chloroplastic-like
123044758 C, C LOC123044758 zeta-carotene desaturase, chloroplastic/chromoplastic
123045021 O, C LOC123045021 indole-3-acetaldehyde oxidase
123045605 O, C LOC123045605 zeaxanthin epoxidase, chloroplastic
123046235 C, C LOC123046235 beta-carotene 3-hydroxylase, chloroplastic
123046402 C, C LOC123046402 carotenoid cleavage dioxygenase 7, chloroplastic-like
123048173 C, M LOC123048173 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic-like
123051536 C, C LOC123051536 carotene epsilon-monooxygenase, chloroplastic
123052650 M, C LOC123052650 zeta-carotene desaturase, chloroplastic/chromoplastic
123052812 O, C LOC123052812 indole-3-acetaldehyde oxidase
123053120 C, C LOC123053120 violaxanthin de-epoxidase, chloroplastic
123053443 O, C LOC123053443 zeaxanthin epoxidase, chloroplastic
123054106 C, C LOC123054106 beta-carotene 3-hydroxylase, chloroplastic
123054247 C, C LOC123054247 carotenoid cleavage dioxygenase 7, chloroplastic
123055773 C, C LOC123055773 9-cis-epoxycarotenoid dioxygenase NCED4, chloroplastic-like
123056732 C, C LOC123056732 carotenoid cleavage dioxygenase 8 homolog B, chloroplastic-like
123058471 O, Y LOC123058471 probable methyltransferase TCM_000336
123058519 C, C LOC123058519 carotenoid cleavage dioxygenase 8 homolog B, chloroplastic
123059241 C, Y LOC123059241 cytochrome P450 711A1
123065549 O, N LOC123065549 probable methyltransferase TCM_000336
123065607 C, C LOC123065607 carotenoid cleavage dioxygenase 8 homolog B, chloroplastic
123067325 C, C LOC123067325 carotenoid cleavage dioxygenase 8 homolog B, chloroplastic
123067326 O, Y LOC123067326 cytochrome P450 711A1
123069994 C, C LOC123069994 lycopene epsilon cyclase, chloroplastic
123072238 O, Y LOC123072238 protein SRG1
123074700 C, C LOC123074700 carotenoid cleavage dioxygenase 8 homolog B, chloroplastic
123078880 O, N LOC123078880 probable methyltransferase TCM_000336
123080479 O, C LOC123080479 protein SRG1
123083133 O, C LOC123083133 cytochrome P450 711A1
123084692 C, C LOC123084692 15-cis-phytoene desaturase, chloroplastic/chromoplastic
123089378 M, C LOC123089378 beta-carotene 3-hydroxylase, chloroplastic
123093501 S, C LOC123093501 cytochrome P450 711A1
123098691 C, C LOC123098691 15-cis-phytoene desaturase, chloroplastic/chromoplastic
123098778 S, C LOC123098778 cytochrome P450 711A1
123102037 M, C LOC123102037 phytoene synthase 2, chloroplastic
123102131 C, C LOC123102131 15-cis-zeta-carotene isomerase, chloroplastic
123103964 S, C LOC123103964 abscisic acid 8'-hydroxylase 3
123104764 C, C LOC123104764 phytoene synthase 2, chloroplastic
123104904 C, C LOC123104904 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic
123105588 C, C LOC123105588 zerumbone synthase
123108286 M, C LOC123108286 beta-carotene 3-hydroxylase, chloroplastic
123109998 M, C LOC123109998 prolycopene isomerase, chloroplastic
123110153 M, C LOC123110153 phytoene synthase 2, chloroplastic
123110233 C, C LOC123110233 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic
123110269 C, C LOC123110269 15-cis-zeta-carotene isomerase, chloroplastic
123112199 S, C LOC123112199 abscisic acid 8'-hydroxylase 3
123113055 M, C LOC123113055 phytoene synthase 2, chloroplastic
123113194 C, C LOC123113194 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic
123113898 C, C LOC123113898 zerumbone synthase
123119179 M, C LOC123119179 phytoene synthase 2, chloroplastic
123119285 C, C LOC123119285 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic
123119310 C, C LOC123119310 15-cis-zeta-carotene isomerase, chloroplastic
123122573 M, C LOC123122573 phytoene synthase 2, chloroplastic
123122716 C, C LOC123122716 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic
123123404 C, C LOC123123404 zerumbone synthase
123127204 C, C LOC123127204 lycopene beta cyclase, chloroplastic
123127338 O, C LOC123127338 cytochrome P450 711A1-like
123127494 C, C LOC123127494 carotene epsilon-monooxygenase, chloroplastic
123128115 S, C LOC123128115 abscisic acid 8'-hydroxylase 1
123128116 C, Y LOC123128116 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic
123128994 C, C LOC123128994 protein LUTEIN DEFICIENT 5, chloroplastic
123133128 C, C LOC123133128 carotenoid cleavage dioxygenase 8 homolog A, chloroplastic
123136803 C, C LOC123136803 lycopene beta cyclase, chloroplastic
123137026 O, C LOC123137026 cytochrome P450 711A1
123137905 S, C LOC123137905 abscisic acid 8'-hydroxylase 1
123137906 C, Y LOC123137906 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic
123139250 O, Y LOC123139250 phytoene synthase 2, chloroplastic
123139251 O, Y LOC123139251 uncharacterized LOC123139251
123139872 C, C LOC123139872 protein LUTEIN DEFICIENT 5, chloroplastic
123144410 O, C LOC123144410 cytochrome P450 711A1
123145207 S, C LOC123145207 abscisic acid 8'-hydroxylase 1
123145208 C, Y LOC123145208 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic
123146173 C, C LOC123146173 protein LUTEIN DEFICIENT 5, chloroplastic
123146215 M, C LOC123146215 uncharacterized LOC123146215
123148020 S, Y LOC123148020 cytochrome P450 711A1
123148636 C, C LOC123148636 beta-carotene isomerase D27, chloroplastic
123149475 M, N LOC123149475 putative aldehyde oxidase-like protein
123149840 O, C LOC123149840 phytoene synthase 1, chloroplastic
123156221 C, C LOC123156221 phytoene synthase 1, chloroplastic
123156568 S, Y LOC123156568 cytochrome P450 711A1-like
123157236 C, C LOC123157236 beta-carotene isomerase D27, chloroplastic
123159401 M, C LOC123159401 putative aldehyde oxidase-like protein
123160002 M, C LOC123160002 putative aldehyde oxidase-like protein
123164721 C, C LOC123164721 beta-carotene isomerase D27, chloroplastic
123165407 M, C LOC123165407 cytochrome P450 711A1
123165432 C, C LOC123165432 phytoene synthase 1, chloroplastic
123166649 O, C LOC123166649 putative aldehyde oxidase-like protein
123166651 M, C LOC123166651 putative aldehyde oxidase-like protein
123173677 O, C LOC123173677 cytochrome P450 711A1
123176935 O, C LOC123176935 cytochrome P450 711A1
123176936 O, C LOC123176936 cytochrome P450 711A1-like
123177310 O, C LOC123177310 cytochrome P450 711A1
123180287 M, C LOC123180287 prolycopene isomerase, chloroplastic
123181586 C, C LOC123181586 carotene epsilon-monooxygenase, chloroplastic
123188694 O, C LOC123188694 indole-3-acetaldehyde oxidase
123189027 C, C LOC123189027 violaxanthin de-epoxidase, chloroplastic
123189717 M, C LOC123189717 prolycopene isomerase, chloroplastic
123189994 C, C LOC123189994 beta-carotene 3-hydroxylase, chloroplastic
123190133 C, C LOC123190133 carotenoid cleavage dioxygenase 7, chloroplastic
123191449 C, C LOC123191449 carotenoid cleavage dioxygenase 8 homolog A, chloroplastic-like


List of genes in hvu


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
123395880 C, C LOC123395880 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic-like
123396798 C, C LOC123396798 15-cis-zeta-carotene isomerase, chloroplastic
123397703 M, C LOC123397703 phytoene synthase 2, chloroplastic-like
123398938 S, C LOC123398938 abscisic acid 8'-hydroxylase 3
123401792 C, N LOC123401792 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic-like
123402753 O, C LOC123402753 cytochrome P450 711A1-like
123403226 C, C LOC123403226 protein LUTEIN DEFICIENT 5, chloroplastic-like
123404304 S, C LOC123404304 abscisic acid 8'-hydroxylase 1
123404754 M, C LOC123404754 lycopene beta cyclase, chloroplastic
123405873 C, C LOC123405873 protein LUTEIN DEFICIENT 5, chloroplastic-like
123407812 M, Y LOC123407812 putative aldehyde oxidase-like protein
123408513 C, C LOC123408513 phytoene synthase 1, chloroplastic-like
123409501 O, C LOC123409501 putative aldehyde oxidase-like protein
123409504 O, C LOC123409504 putative aldehyde oxidase-like protein
123410292 C, C LOC123410292 beta-carotene isomerase D27, chloroplastic
123410456 S, Y LOC123410456 cytochrome P450 711A1-like
123412504 M, C LOC123412504 putative aldehyde oxidase-like protein
123412580 C, C LOC123412580 9-cis-epoxycarotenoid dioxygenase 1, chloroplastic-like
123413860 C, C LOC123413860 prolycopene isomerase, chloroplastic
123425989 C, C LOC123425989 zeta-carotene desaturase, chloroplastic/chromoplastic
123426194 O, C LOC123426194 indole-3-acetaldehyde oxidase-like
123426505 C, C LOC123426505 violaxanthin de-epoxidase, chloroplastic
123426856 M, C LOC123426856 zeaxanthin epoxidase, chloroplastic
123427568 M, C LOC123427568 carotenoid cleavage dioxygenase 7, chloroplastic
123430624 C, C LOC123430624 beta-carotene 3-hydroxylase, chloroplastic-like
123437999 C, C LOC123437999 carotene epsilon-monooxygenase, chloroplastic
123439361 S, C LOC123439361 cytochrome P450 711A1
123439364 O, N LOC123439364 probable methyltransferase TCM_000336
123440140 O, N LOC123440140 probable methyltransferase TCM_000336
123440243 C, C LOC123440243 carotenoid cleavage dioxygenase 8 homolog B, chloroplastic
123440801 M, C LOC123440801 protein SRG1
123441405 M, C LOC123441405 carotenoid cleavage dioxygenase 8 homolog B, chloroplastic-like
123443767 C, C LOC123443767 lycopene epsilon cyclase, chloroplastic
123447225 O, C LOC123447225 cytochrome P450 711A1-like
123447226 M, C LOC123447226 cytochrome P450 711A1-like
123449634 C, C LOC123449634 15-cis-phytoene desaturase, chloroplastic/chromoplastic
123449828 M, C LOC123449828 beta-carotene 3-hydroxylase, chloroplastic-like
123451928 C, C LOC123451928 phytoene synthase 2, chloroplastic-like
123452108 C, C LOC123452108 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic-like
123452931 O, Y LOC123452931 zerumbone synthase


List of genes in ghi


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
107885978 O, C LOC107885978 abscisic acid 8'-hydroxylase 2
107888796 C, C LOC107888796 zeta-carotene desaturase, chloroplastic/chromoplastic
107889184 C, C LOC107889184 capsanthin/capsorubin synthase, chromoplastic
107890583 C, C LOC107890583 9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic
107890752 C, C LOC107890752 beta-carotene hydroxylase 2, chloroplastic
107892463 C, C LOC107892463 violaxanthin de-epoxidase, chloroplastic
107892904 C, C LOC107892904 capsanthin/capsorubin synthase, chromoplastic
107893220 C, C LOC107893220 zeta-carotene desaturase, chloroplastic/chromoplastic
107894265 S, C LOC107894265 abscisic acid 8'-hydroxylase 4
107895783 C, C LOC107895783 probable methyltransferase TCM_000336
107896707 O, Y LOC107896707 protein SRG1
107897099 O, Y LOC107897099 carotenoid cleavage dioxygenase 8 homolog B, chloroplastic
107897837 C, V LOC107897837 zeaxanthin epoxidase, chloroplastic
107899374 C, C LOC107899374 phytoene synthase 2, chloroplastic
107900428 C, C LOC107900428 phytoene synthase 2, chloroplastic
107900521 O, C LOC107900521 carotenoid cleavage dioxygenase 8 homolog B, chloroplastic
107900693 S, C LOC107900693 abscisic acid 8'-hydroxylase CYP707A2
107901528 O, Y LOC107901528 carotenoid cleavage dioxygenase 8 homolog B, chloroplastic
107901883 C, M LOC107901883 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic
107901939 O, C LOC107901939 indole-3-acetaldehyde oxidase
107902032 C, C LOC107902032 15-cis-phytoene desaturase, chloroplastic/chromoplastic
107905568 M, C LOC107905568 abscisic acid 8'-hydroxylase CYP707A1
107905887 S, C LOC107905887 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic
107907017 O, P LOC107907017 cytochrome P450 711A1
107907128 C, P LOC107907128 lycopene epsilon cyclase, chloroplastic
107908906 S, C LOC107908906 abscisic acid 8'-hydroxylase 4
107909170 C, C LOC107909170 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic
107910439 C, C LOC107910439 15-cis-zeta-carotene isomerase, chloroplastic
107912930 C, C LOC107912930 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic
107912958 C, C LOC107912958 protein LUTEIN DEFICIENT 5, chloroplastic
107913245 C, C LOC107913245 zeaxanthin epoxidase, chloroplastic
107913606 S, C LOC107913606 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic
107914299 C, C LOC107914299 phytoene synthase 2, chloroplastic
107914777 C, C LOC107914777 15-cis-phytoene desaturase, chloroplastic/chromoplastic-like
107914792 C, C LOC107914792 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic
107916071 O, Y LOC107916071 protein SRG1
107918579 C, C LOC107918579 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic
107919219 C, C LOC107919219 protein LUTEIN DEFICIENT 5, chloroplastic
107920020 C, C LOC107920020 zeta-carotene desaturase, chloroplastic/chromoplastic
107920536 C, Y LOC107920536 xanthoxin dehydrogenase
107922266 C, N LOC107922266 prolycopene isomerase, chloroplastic
107923980 C, C LOC107923980 carotenoid cleavage dioxygenase 7, chloroplastic
107928268 C, C LOC107928268 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic
107929452 S, C LOC107929452 abscisic acid 8'-hydroxylase CYP707A2
107930284 M, C LOC107930284 beta-carotene hydroxylase 2, chloroplastic
107932206 C, C LOC107932206 lycopene epsilon cyclase, chloroplastic
107933310 C, Y LOC107933310 xanthoxin dehydrogenase
107933465 S, C LOC107933465 abscisic acid 8'-hydroxylase CYP707A2
107935002 S, C LOC107935002 abscisic acid 8'-hydroxylase 4
107935548 O, Y LOC107935548 lycopene beta cyclase, chloroplastic/chromoplastic
107936154 C, C LOC107936154 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic
107936185 C, C LOC107936185 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic-like
107937468 O, Y LOC107937468 abscisic acid 8'-hydroxylase 2-like
107937734 S, C LOC107937734 lycopene epsilon cyclase, chloroplastic
107940426 C, C LOC107940426 prolycopene isomerase, chloroplastic
107941648 C, C LOC107941648 beta-carotene isomerase D27, chloroplastic
107942317 C, C LOC107942317 9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic
107942497 C, X LOC107942497 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic-like
107944259 C, C LOC107944259 lycopene epsilon cyclase, chloroplastic
107944539 O, Y LOC107944539 abscisic-aldehyde oxidase
107945551 C, C LOC107945551 carotenoid cleavage dioxygenase 7, chloroplastic
107945830 S, Y LOC107945830 abscisic acid 8'-hydroxylase 3
107945832 O, K LOC107945832 probable methyltransferase TCM_000336
107945977 C, C LOC107945977 zeta-carotene desaturase, chloroplastic/chromoplastic
107946820 C, C LOC107946820 probable carotenoid cleavage dioxygenase 4, chloroplastic
107946838 O, N LOC107946838 abscisic acid 8'-hydroxylase CYP707A2
107947054 C, C LOC107947054 beta-carotene 3-hydroxylase 2, chloroplastic
107947364 C, C LOC107947364 probable carotenoid cleavage dioxygenase 4, chloroplastic
107947686 C, C LOC107947686 beta-carotene 3-hydroxylase, chloroplastic
107948080 S, C LOC107948080 beta-carotene 3-hydroxylase 2, chloroplastic
107950138 O, C LOC107950138 abscisic acid 8'-hydroxylase 2
107951527 C, C LOC107951527 15-cis-zeta-carotene isomerase, chloroplastic
107953845 O, C LOC107953845 carotenoid cleavage dioxygenase 8 homolog B, chloroplastic
107953940 C, C LOC107953940 phytoene synthase 2, chloroplastic-like
107954095 C, C LOC107954095 abscisic acid 8'-hydroxylase 2
107954237 O, N LOC107954237 abscisic-aldehyde oxidase
107954454 O, Y LOC107954454 lycopene beta cyclase, chloroplastic/chromoplastic
107954542 S, Y LOC107954542 abscisic acid 8'-hydroxylase 3
107955483 C, C LOC107955483 beta-carotene isomerase D27, chloroplastic
107958119 M, C LOC107958119 abscisic acid 8'-hydroxylase CYP707A1
107958867 O, P LOC107958867 cytochrome P450 711A1
107959240 O, E LOC107959240 indole-3-acetaldehyde oxidase
107959745 C, C LOC107959745 phytoene synthase 2, chloroplastic
107960922 M, C LOC107960922 phytoene synthase 2, chloroplastic
107961898 C, C LOC107961898 violaxanthin de-epoxidase, chloroplastic
107963591 O, C LOC107963591 phytoene synthase 2, chloroplastic
121209533 C, C LOC121209533 carotene epsilon-monooxygenase, chloroplastic
121211198 C, C LOC121211198 beta-carotene 3-hydroxylase, chloroplastic
121212207 S, C LOC121212207 abscisic acid 8'-hydroxylase 4
121221084 C, C LOC121221084 phytoene synthase 2, chloroplastic
121223568 C, C LOC121223568 carotene epsilon-monooxygenase, chloroplastic
121229283 O, E LOC121229283 indole-3-acetaldehyde oxidase


List of genes in bna


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
106345264 O, N LOC106345264 probable methyltransferase TCM_000336
106345736 O, Y LOC106345736 xanthoxin dehydrogenase
106346323 S, C LOC106346323 violaxanthin de-epoxidase, chloroplastic
106347114 C, C LOC106347114 beta-carotene 3-hydroxylase 1, chloroplastic
106348955 C, M LOC106348955 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic
106350180 C, C LOC106350180 15-cis-zeta-carotene isomerase, chloroplastic
106352760 C, C LOC106352760 carotene epsilon-monooxygenase, chloroplastic
106354425 C, C LOC106354425 phytoene synthase, chloroplastic-like
106354557 C, C LOC106354557 9-cis-epoxycarotenoid dioxygenase NCED9, chloroplastic
106354700 O, N LOC106354700 9-cis-epoxycarotenoid dioxygenase NCED9, chloroplastic
106357937 C, C LOC106357937 15-cis-zeta-carotene isomerase, chloroplastic
106358361 C, C LOC106358361 zeaxanthin epoxidase, chloroplastic
106358999 O, K LOC106358999 probable methyltransferase TCM_000336
106360920 C, C LOC106360920 probable carotenoid cleavage dioxygenase 4, chloroplastic
106361235 S, C LOC106361235 abscisic acid 8'-hydroxylase 3
106361559 C, C LOC106361559 15-cis-phytoene desaturase, chloroplastic/chromoplastic-like
106363948 C, C LOC106363948 probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic
106369285 M, C LOC106369285 beta-carotene isomerase D27, chloroplastic
106370318 C, C LOC106370318 carotenoid cleavage dioxygenase 7, chloroplastic
106371158 C, C LOC106371158 carotenoid cleavage dioxygenase 8, chloroplastic-like
106371493 C, C LOC106371493 lycopene epsilon cyclase, chloroplastic-like
106371962 C, C LOC106371962 phytoene synthase, chloroplastic-like
106372794 O, C LOC106372794 carotenoid cleavage dioxygenase 8, chloroplastic-like
106374342 O, C LOC106374342 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic-like
106374933 S, C LOC106374933 abscisic acid 8'-hydroxylase 1-like
106375326 C, C LOC106375326 carotenoid cleavage dioxygenase 8, chloroplastic
106376926 O, N LOC106376926 protein SRG1-like
106377068 C, C LOC106377068 probable carotenoid cleavage dioxygenase 4, chloroplastic
106377177 O, Y LOC106377177 lycopene beta cyclase, chloroplastic
106379426 S, C LOC106379426 abscisic acid 8'-hydroxylase 3
106386282 C, C LOC106386282 phytoene synthase, chloroplastic-like
106386394 S, C LOC106386394 abscisic acid 8'-hydroxylase 3
106387066 C, C LOC106387066 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic-like
106387316 C, C LOC106387316 lycopene epsilon cyclase, chloroplastic
106387714 C, C LOC106387714 phytoene synthase, chloroplastic
106390346 C, V LOC106390346 zeaxanthin epoxidase, chloroplastic
106390565 O, Y LOC106390565 xanthoxin dehydrogenase
106390766 C, C LOC106390766 15-cis-phytoene desaturase, chloroplastic/chromoplastic-like
106391221 S, C LOC106391221 abscisic acid 8'-hydroxylase 2
106394225 C, M LOC106394225 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic
106395068 S, C LOC106395068 abscisic acid 8'-hydroxylase 4
106396666 O, Y LOC106396666 protein SRG1
106397892 C, C LOC106397892 9-cis-epoxycarotenoid dioxygenase NCED9, chloroplastic-like
106401087 C, C LOC106401087 protein LUTEIN DEFICIENT 5, chloroplastic
106401831 S, Y LOC106401831 cytochrome P450 711A1
106402766 M, C LOC106402766 beta-carotene isomerase D27, chloroplastic
106405085 C, C LOC106405085 beta-carotene 3-hydroxylase 2, chloroplastic-like
106406976 C, C LOC106406976 beta-carotene 3-hydroxylase 1, chloroplastic
106409692 O, C LOC106409692 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic
106411029 O, Y LOC106411029 probable methyltransferase TCM_000336
106414823 C, C LOC106414823 protein LUTEIN DEFICIENT 5, chloroplastic
106415200 O, Y LOC106415200 violaxanthin de-epoxidase, chloroplastic-like
106416491 S, C LOC106416491 abscisic acid 8'-hydroxylase 3
106416608 S, C LOC106416608 abscisic acid 8'-hydroxylase 4
106418464 C, C LOC106418464 lycopene epsilon cyclase, chloroplastic-like
106419785 S, C LOC106419785 abscisic acid 8'-hydroxylase 1
106420156 C, C LOC106420156 prolycopene isomerase, chloroplastic
106421444 C, C LOC106421444 beta-carotene 3-hydroxylase 2, chloroplastic
106421466 C, C LOC106421466 beta-carotene 3-hydroxylase 2, chloroplastic-like
106422159 C, C LOC106422159 probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic
106422225 C, C LOC106422225 probable carotenoid cleavage dioxygenase 4, chloroplastic
106423568 C, M LOC106423568 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic-like
106425473 S, C LOC106425473 abscisic acid 8'-hydroxylase 3
106427407 C, C LOC106427407 zeta-carotene desaturase, chloroplastic/chromoplastic
106427439 S, C LOC106427439 abscisic acid 8'-hydroxylase 3
106428338 S, C LOC106428338 abscisic acid 8'-hydroxylase 4-like
106436514 C, C LOC106436514 lycopene epsilon cyclase, chloroplastic
106438384 S, Y LOC106438384 cytochrome P450 711A1
106439368 C, C LOC106439368 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic-like
106439724 C, C LOC106439724 15-cis-phytoene desaturase, chloroplastic/chromoplastic-like
106441091 C, C LOC106441091 9-cis-epoxycarotenoid dioxygenase NCED9, chloroplastic-like
106442526 O, C LOC106442526 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic
106442750 C, C LOC106442750 beta-carotene 3-hydroxylase 1, chloroplastic
106442837 C, C LOC106442837 beta-carotene 3-hydroxylase 1, chloroplastic-like
106443463 O, K LOC106443463 probable methyltransferase TCM_000336
106444094 S, C LOC106444094 abscisic acid 8'-hydroxylase 4
106445448 O, Y LOC106445448 abscisic-aldehyde oxidase
106445763 C, C LOC106445763 15-cis-phytoene desaturase, chloroplastic/chromoplastic
106446003 O, Y LOC106446003 protein SRG1
106446766 O, Y LOC106446766 abscisic-aldehyde oxidase
106446905 S, C LOC106446905 abscisic acid 8'-hydroxylase 2-like
106449171 O, N LOC106449171 probable methyltransferase TCM_000336
106449275 C, X LOC106449275 9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic-like
106452442 C, C LOC106452442 carotene epsilon-monooxygenase, chloroplastic-like
106452665 O, Y LOC106452665 lycopene beta cyclase, chloroplastic-like
106453079 C, C LOC106453079 zeta-carotene desaturase, chloroplastic/chromoplastic
106454477 M, C LOC106454477 9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic-like
106454982 O, Y LOC106454982 protein SRG1-like
111204767 M, C LOC111204767 abscisic acid 8'-hydroxylase 4
111208232 M, C LOC111208232 abscisic acid 8'-hydroxylase 1
111209689 S, C LOC111209689 abscisic acid 8'-hydroxylase 1-like
111210027 C, C LOC111210027 zeaxanthin epoxidase, chloroplastic
111212385 O, C LOC111212385 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic-like
111213688 C, C LOC111213688 phytoene synthase, chloroplastic
125575647 C, C LOC125575647 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic-like
125577768 C, C LOC125577768 zeaxanthin epoxidase, chloroplastic-like
125578640 C, C LOC125578640 prolycopene isomerase, chloroplastic
125585432 S, C LOC125585432 abscisic acid 8'-hydroxylase 2
125594970 C, C LOC125594970 phytoene synthase, chloroplastic-like
125598879 M, C LOC125598879 abscisic acid 8'-hydroxylase 1-like
125600415 M, C LOC125600415 abscisic acid 8'-hydroxylase 1-like
125603030 O, Y LOC125603030 protein SRG1-like
125606749 C, C LOC125606749 9-cis-epoxycarotenoid dioxygenase NCED9, chloroplastic-like
125608382 C, C LOC125608382 carotenoid cleavage dioxygenase 7, chloroplastic-like
125608795 O, Y LOC125608795 protein SRG1-like
125610300 C, C LOC125610300 probable carotenoid cleavage dioxygenase 4, chloroplastic


List of genes in cre


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
5716547 C, M CHLRE_12g509650v5 uncharacterized protein
5721657 C, C CHLRE_08g365851v5 uncharacterized protein
5721910 M, C CHLRE_06g267600v5 uncharacterized protein
5723787 C, C CHLRE_16g651923v5 uncharacterized protein
5724272 M, C CHLRE_04g215050v5 uncharacterized protein
5724273 O, P CHLRE_04g215000v5 uncharacterized protein
5726062 M, M CHLRE_02g142266v5 uncharacterized protein
5726519 M, C_M CHLRE_07g314150v5 uncharacterized protein
5726776 M, C CHLRE_02g095092v5 uncharacterized protein
5727168 C, C CHLRE_02g073900v5 uncharacterized protein
5727169 M, C CHLRE_02g073950v5 uncharacterized protein
5727328 M, C CHLRE_02g082550v5 uncharacterized protein
5729184 M, M CHLRE_19g750247v5 uncharacterized protein


List of genes in sbi


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
8055312 C, C LOC8055312 protein LUTEIN DEFICIENT 5, chloroplastic
8055963 C, M LOC8055963 carotenoid cleavage dioxygenase 7, chloroplastic
8057083 C, C LOC8057083 zerumbone synthase
8057289 C, S LOC8057289 putative aldehyde oxidase-like protein
8057987 C, C LOC8057987 carotenoid cleavage dioxygenase 8 homolog A, chloroplastic
8058776 C, C LOC8058776 carotene epsilon-monooxygenase, chloroplastic
8059146 S, C LOC8059146 cytochrome P450 711A1
8059147 O, Y LOC8059147 salicylate carboxymethyltransferase
8060428 C, C LOC8060428 beta-carotene hydroxylase 2, chloroplastic
8061987 S, C LOC8061987 cytochrome P450 711A1
8062181 C, C LOC8062181 carotenoid cleavage dioxygenase 8 homolog B, chloroplastic
8062208 C, C LOC8062208 9-cis-epoxycarotenoid dioxygenase 1, chloroplastic
8062677 C, C LOC8062677 beta-carotene isomerase D27, chloroplastic
8064382 C, C LOC8064382 carotenoid cleavage dioxygenase 8 homolog A, chloroplastic
8068068 S, C LOC8068068 cytochrome P450 711A1
8068807 S, C LOC8068807 cytochrome P450 716B1
8070802 O, N LOC8070802 violaxanthin de-epoxidase, chloroplastic
8071502 C, C LOC8071502 phytoene synthase 2, chloroplastic
8071947 C, C LOC8071947 prolycopene isomerase, chloroplastic
8073163 S, C LOC8073163 abscisic acid 8'-hydroxylase 1
8073779 S, C LOC8073779 cytochrome P450 711A1
8077239 C, C LOC8077239 phytoene synthase 2, chloroplastic
8077659 C, C LOC8077659 lycopene beta cyclase, chloroplastic
8078213 M, C LOC8078213 lycopene epsilon cyclase, chloroplastic
8078415 C, C LOC8078415 zeta-carotene desaturase, chloroplastic/chromoplastic
8080133 O, C LOC8080133 taxadiene 5-alpha hydroxylase
8081132 C, C LOC8081132 9-cis-epoxycarotenoid dioxygenase 1, chloroplastic
8081161 C, C LOC8081161 indole-3-acetaldehyde oxidase
8081307 S, Y LOC8081307 protein SRG1
8083090 S, C LOC8083090 abscisic acid 8'-hydroxylase 3
8083537 S, C LOC8083537 abscisic acid 8'-hydroxylase 2
8084619 M, C LOC8084619 putative aldehyde oxidase-like protein
8085716 C, C LOC8085716 beta-carotene 3-hydroxylase, chloroplastic
110429871 C, C LOC110429871 15-cis-zeta-carotene isomerase, chloroplastic
110431022 C, C LOC110431022 phytoene synthase, chloroplastic
110432873 S, C LOC110432873 putative aldehyde oxidase-like protein
110434687 C, C LOC110434687 zeaxanthin 7,8(7',8')-cleavage dioxygenase, chromoplastic-like
110436123 C, M LOC110436123 zeaxanthin epoxidase, chloroplastic
110436156 C, C LOC110436156 phytoene dehydrogenase, chloroplastic/chromoplastic


List of genes in sot


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
102577541 S, C LOC102577541 ABA 8'-hydroxylase CYP707A1
102577582 C, C LOC102577582 phytoene dehydrogenase, chloroplastic/chromoplastic
102577723 S, C LOC102577723 ABA 8'-hydroxylase CYP707A2
102577733 C, C LOC102577733 9-cis-epoxy-carotenoid dioxygenase 2
102577783 C, C LOC102577783 9-cis-epoxy-carotenoid dioxygenase 1
102577811 O, Y LOC102577811 short-chain dehydrogenase/reductase
102577922 C, C LOC102577922 lycopene epsilon cyclase, chloroplastic
102579540 C, C LOC102579540 9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic
102580250 C, M LOC102580250 beta-carotene hydroxylase 1, chloroplastic-like
102581808 C, C LOC102581808 probable carotenoid cleavage dioxygenase 4, chloroplastic
102582135 C, C LOC102582135 beta-carotene hydroxylase 2, chloroplastic
102584670 O, Y LOC102584670 xanthoxin dehydrogenase-like
102587589 O, C LOC102587589 carotenoid cleavage dioxygenase 7, chloroplastic
102587652 O, Y LOC102587652 phytoene synthase 2, chloroplastic-like
102588119 O, N LOC102588119 abscisic-aldehyde oxidase-like
102588363 O, N LOC102588363 beta-carotene isomerase D27, chloroplastic
102588520 O, C LOC102588520 violaxanthin de-epoxidase, chloroplastic
102589336 O, C LOC102589336 phytoene synthase 2, chloroplastic
102589614 C, C LOC102589614 probable carotenoid cleavage dioxygenase 4, chloroplastic
102590256 O, K LOC102590256 salicylate carboxymethyltransferase
102591173 C, C LOC102591173 protein LUTEIN DEFICIENT 5, chloroplastic
102591274 C, C LOC102591274 carotene epsilon-monooxygenase, chloroplastic
102591473 C, M LOC102591473 beta-carotene hydroxylase 1, chloroplastic
102591514 O, N LOC102591514 protein SRG1
102591604 O, Y LOC102591604 prolycopene isomerase, chloroplastic
102592281 C, C LOC102592281 zeaxanthin epoxidase, chloroplastic-like
102593258 S, C LOC102593258 cytochrome P450 711A1
102593756 C, C LOC102593756 phytoene synthase 1, chloroplastic
102595155 O, Y LOC102595155 carotenoid cleavage dioxygenase 8 homolog B, chloroplastic
102595971 C, C LOC102595971 lycopene beta cyclase, chloroplastic
102597402 S, C LOC102597402 abscisic acid 8'-hydroxylase 4-like
102597428 O, C LOC102597428 lycopene beta cyclase, chloroplastic
102598224 O, C LOC102598224 abscisic-aldehyde oxidase-like
102598493 C, C LOC102598493 zeta-carotene desaturase, chloroplastic/chromoplastic
102598892 O, Y LOC102598892 indole-3-acetaldehyde oxidase-like
102599541 O, N LOC102599541 abscisic-aldehyde oxidase-like
102600257 C, C LOC102600257 15-cis-zeta-carotene isomerase, chloroplastic
102601215 C, C LOC102601215 neoxanthin synthase, chloroplastic
102603193 C, C LOC102603193 phytoene synthase 2, chloroplastic-like
102605008 S, C LOC102605008 abscisic acid 8'-hydroxylase 1


List of genes in cit


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
102577949 C, C LOC102577949 prolycopene isomerase, chloroplastic
102577956 O, C LOC102577956 abscisic-aldehyde oxidase
102577966 O, C LOC102577966 phytoene desaturase
102577969 C, C LOC102577969 ZDS
102577974 O, Y ABA2 short chain alcohol dehydrogenase
102577984 S, C LOC102577984 zeaxanthin epoxidase, chloroplastic
102577994 C, C VDE violaxanthin de-epoxidase
102578000 O, N AOG ABA glucosyltransferase
102578001 C, C LOC102578001 phytoene synthase
102578021 C, C LOC102578021 beta-carotene hydroxylase
102578042 O, C LOC102578042 lycopene beta-cyclase 1
102578059 M, P LOC102578059 lycopene epsilon cyclase, chloroplastic
102578064 C, N NCED putative 9-cis-epoxycarotenoid dioxygenase 3
102578070 C, C LOC102578070 9-cis-epoxycarotenoid dioxygenase 2
102608755 S, C LOC102608755 abscisic acid 8'-hydroxylase 4-like
102611561 S, C CYP707A4 abscisic acid 8'-hydroxylase 3-like
102611969 C, C LOC102611969 carotenoid cleavage dioxygenase 8 homolog B, chloroplastic-like
102612016 C, C LOC102612016 9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic
102612266 C, C LOC102612266 carotenoid cleavage dioxygenase 8 homolog B, chloroplastic-like
102612995 C, C LOC102612995 probable carotenoid cleavage dioxygenase 4, chloroplastic
102613470 S, C CYP707A1 abscisic acid 8'-hydroxylase 1-like
102613694 O, C LOC102613694 indole-3-acetaldehyde oxidase-like
102613995 O, Y LOC102613995 indole-3-acetaldehyde oxidase-like
102614132 C, C LOC102614132 phytoene synthase 2, chloroplastic-like
102616423 S, C CYP707A3 abscisic acid 8'-hydroxylase 4-like
102617763 C, C LOC102617763 beta-carotene 3-hydroxylase 1, chloroplastic-like
102617968 M, C LOC102617968 beta-carotene isomerase D27, chloroplastic
102619293 O, C LOC102619293 zeaxanthin epoxidase, chloroplastic-like
102619882 O, P LOC102619882 cytochrome P450 711A1
102620327 C, Y LOC102620327 protein LUTEIN DEFICIENT 5, chloroplastic
102621234 M, C LOC102621234 probable carotenoid cleavage dioxygenase 4, chloroplastic
102621818 O, C LOC102621818 probable carotenoid cleavage dioxygenase 4, chloroplastic
102624842 O, Y LOC102624842 probable methyltransferase TCM_000336
102625209 C, C LOC102625209 capsanthin/capsorubin synthase, chromoplastic-like
102625494 O, Y LOC102625494 protein SRG1
102625870 C, C LOC102625870 carotene epsilon-monooxygenase, chloroplastic
102626434 M, M LOC102626434 carotenoid cleavage dioxygenase 7, chloroplastic
102627021 S, C CYP707A2 abscisic acid 8'-hydroxylase 2-like
102628671 S, P LOC102628671 cytochrome P450 711A1-like
102630760 C, P LOC102630760 15-cis-zeta-carotene isomerase, chloroplastic


List of genes in bdi


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
100821922 C, C LOC100821922 lycopene epsilon cyclase, chloroplastic
100822197 C, C LOC100822197 carotenoid cleavage dioxygenase 7, chloroplastic
100822305 C, C LOC100822305 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic
100823225 C, C LOC100823225 putative aldehyde oxidase-like protein
100825245 C, C LOC100825245 beta-carotene isomerase D27, chloroplastic
100827045 C, C LOC100827045 zerumbone synthase
100829833 O, S LOC100829833 probable aldehyde oxidase 2
100829969 C, C LOC100829969 violaxanthin de-epoxidase, chloroplastic
100830664 C, C PDS phytoene dehydrogenase, chloroplastic/chromoplastic
100831495 S, C LOC100831495 cytochrome P450 711A1
100831734 C, C LOC100831734 carotenoid cleavage dioxygenase 8 homolog B, chloroplastic
100831790 C, C LOC100831790 phytoene synthase 2, chloroplastic
100832896 M, C LOC100832896 phytoene synthase 2, chloroplastic
100833286 S, C LOC100833286 abscisic acid 8'-hydroxylase 2
100833577 O, N LOC100833577 salicylate carboxymethyltransferase
100834203 C, C LOC100834203 protein LUTEIN DEFICIENT 5, chloroplastic
100835175 C, C LOC100835175 zeaxanthin epoxidase, chloroplastic
100835344 C, C LOC100835344 carotene epsilon-monooxygenase, chloroplastic
100835478 C, C LOC100835478 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic
100836107 C, C LOC100836107 9-cis-epoxycarotenoid dioxygenase NCED4, chloroplastic
100836583 C, C LOC100836583 zeta-carotene desaturase, chloroplastic/chromoplastic
100836591 M, C LOC100836591 beta-carotene 3-hydroxylase, chloroplastic
100836792 S, C LOC100836792 cytochrome P450 711A1
100837035 M, C LOC100837035 beta-carotene 3-hydroxylase, chloroplastic
100837492 C, C LOC100837492 abscisic acid 8'-hydroxylase 1
100838443 C, C LOC100838443 prolycopene isomerase, chloroplastic
100838931 S, C LOC100838931 cytochrome P450 711A1
100840652 M, C LOC100840652 prolycopene isomerase, chloroplastic
100841101 S, C LOC100841101 cytochrome P450 711A1
100842276 M, C LOC100842276 15-cis-zeta-carotene isomerase, chloroplastic
100844630 O, C LOC100844630 phytoene synthase 2, chloroplastic
100844860 O, Y LOC100844860 probable 2-oxoglutarate-dependent dioxygenase ANS
100845194 C, C LOC100845194 cytochrome P450 711A1-like
100845393 C, N LOC100845393 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic
104583450 C, C LOC104583450 lycopene beta cyclase, chloroplastic


List of genes in nta


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
107759354 O, N LOC107759354 abscisic-aldehyde oxidase-like
107760423 S, C LOC107760423 abscisic acid 8'-hydroxylase CYP707A1-like
107760487 O, Y LOC107760487 (+)-borneol dehydrogenase 2
107760986 O, C LOC107760986 beta-carotene isomerase D27, chloroplastic-like
107761716 O, C LOC107761716 phytoene synthase 2, chloroplastic
107761917 C, C LOC107761917 carotene epsilon-monooxygenase, chloroplastic-like
107763207 O, C LOC107763207 lycopene beta cyclase, chloroplastic
107763261 O, K LOC107763261 putative methyltransferase TCM_000336
107763628 O, C LOC107763628 violaxanthin de-epoxidase, chloroplastic
107763949 C, M LOC107763949 zeaxanthin epoxidase, chloroplastic
107765743 O, Y LOC107765743 xanthoxin dehydrogenase
107765752 O, Y LOC107765752 (+)-borneol dehydrogenase 2-like
107767418 C, C LOC107767418 putative carotenoid cleavage dioxygenase 4, chloroplastic
107767822 C, M LOC107767822 carotenoid cleavage dioxygenase 7, chloroplastic-like
107768490 O, C LOC107768490 indole-3-acetaldehyde oxidase
107769042 O, Y LOC107769042 protein LATERAL BRANCHING OXIDOREDUCTASE 1-like
107771847 C, C LOC107771847 carotenoid cleavage dioxygenase 7, chloroplastic-like
107771869 M, C LOC107771869 beta-carotene isomerase D27, chloroplastic
107772271 C, C LOC107772271 zeta-carotene desaturase, chloroplastic/chromoplastic-like
107772713 C, C LOC107772713 phytoene synthase 2, chloroplastic-like
107775451 C, C LOC107775451 protein LUTEIN DEFICIENT 5, chloroplastic
107776450 S, C LOC107776450 abscisic acid 8'-hydroxylase 4
107776975 S, C LOC107776975 abscisic acid 8'-hydroxylase CYP707A2-like
107778136 O, Y LOC107778136 xanthoxin dehydrogenase-like
107780507 O, Y LOC107780507 violaxanthin de-epoxidase, chloroplastic-like
107781156 O, P LOC107781156 cytochrome P450 711A1
107781531 S, C LOC107781531 abscisic acid 8'-hydroxylase 4-like
107782076 C, C LOC107782076 9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic-like
107784015 O, C LOC107784015 abscisic-aldehyde oxidase
107784210 O, K LOC107784210 putative methyltransferase TCM_000336
107784989 C, C LOC107784989 neoxanthin synthase, chloroplastic-like
107788517 O, N LOC107788517 aldehyde oxidase 4-like
107788963 C, C LOC107788963 15-cis-phytoene desaturase, chloroplastic/chromoplastic
107789691 M, P LOC107789691 lycopene epsilon cyclase, chloroplastic
107789701 C, C LOC107789701 beta-carotene hydroxylase 2, chloroplastic
107791323 C, C LOC107791323 probable carotenoid cleavage dioxygenase 4, chloroplastic
107791326 O, Y LOC107791326 prolycopene isomerase, chloroplastic
107791402 S, C LOC107791402 abscisic acid 8'-hydroxylase CYP707A2
107793151 C, M LOC107793151 phytoene synthase 2, chloroplastic-like
107797025 C, C LOC107797025 phytoene synthase 2, chloroplastic
107797056 C, C LOC107797056 carotene epsilon-monooxygenase, chloroplastic
107797654 C, C LOC107797654 zeaxanthin epoxidase, chloroplastic
107798230 C, P LOC107798230 15-cis-zeta-carotene isomerase, chloroplastic
107799511 C, C LOC107799511 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic-like
107801738 C, C LOC107801738 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic-like
107802049 O, N LOC107802049 aldehyde oxidase 4-like
107802057 C, C LOC107802057 neoxanthin synthase, chloroplastic
107804348 S, C LOC107804348 abscisic acid 8'-hydroxylase CYP707A2-like
107804502 S, C LOC107804502 abscisic acid 8'-hydroxylase 4
107809095 O, C LOC107809095 lycopene beta cyclase, chloroplastic-like
107809222 C, C LOC107809222 beta-carotene hydroxylase 2, chloroplastic-like
107812793 O, Y LOC107812793 carotenoid cleavage dioxygenase 8 homolog B, chloroplastic-like
107814412 C, C LOC107814412 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic-like
107815312 C, C LOC107815312 9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic-like
107816873 C, C LOC107816873 15-cis-phytoene desaturase, chloroplastic/chromoplastic
107817233 O, K LOC107817233 putative methyltransferase TCM_000336
107818364 O, Y LOC107818364 protein LATERAL BRANCHING OXIDOREDUCTASE 1-like
107818367 C, C LOC107818367 phytoene synthase 2, chloroplastic-like
107820237 C, C LOC107820237 protein LUTEIN DEFICIENT 5, chloroplastic
107820622 S, C LOC107820622 abscisic acid 8'-hydroxylase 4-like
107821949 O, Y LOC107821949 carotenoid cleavage dioxygenase 8 homolog B, chloroplastic
107822278 C, C LOC107822278 beta-carotene hydroxylase 2, chloroplastic-like
107822968 C, C LOC107822968 probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic
107823578 C, C LOC107823578 probable carotenoid cleavage dioxygenase 4, chloroplastic
107824030 C, M LOC107824030 phytoene synthase 2, chloroplastic-like
107824034 C, C LOC107824034 beta-carotene hydroxylase 2, chloroplastic-like
107827644 C, C LOC107827644 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic-like
107830097 S, C LOC107830097 abscisic acid 8'-hydroxylase CYP707A2
107830915 C, C LOC107830915 zeta-carotene desaturase, chloroplastic/chromoplastic
107830918 M, P LOC107830918 lycopene epsilon cyclase, chloroplastic
107830961 O, N LOC107830961 abscisic-aldehyde oxidase
107832559 O, C LOC107832559 prolycopene isomerase, chloroplastic-like
107832565 O, K LOC107832565 putative methyltransferase TCM_000336
142174772 C, C LOC142174772 15-cis-zeta-carotene isomerase, chloroplastic-like


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