GO:0006259 DNA metabolic process

381 ath genes in this database.
11 osa genes in this database.

[QuickGO]

term: DNA metabolic process
goid: GO:0006259

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Shaded genes do not have GeneChip data. The output was limited up to 10000.
Species Symbol Gene
coexpression		 Locus
page 		Full name* Entrez Gene ID Evidence*
ath ORC4 origin recognition complex subunit 4 814641
ath AT2G01440 DEAD/DEAH box RNA helicase family protein 814672
ath WHY3 ssDNA-binding transcriptional regulator 814803
ath AtPOT1a Nucleic acid-binding, OB-fold-like protein 815069
ath AT2G06040 F-box/LRR protein 815159
ath RPA1A replication protein A 1A 815209
ath MCM5 Minichromosome maintenance (MCM2/3/5) family protein 815415
ath AT2G13720 putative DNA topoisomerase 815856
ath SRP2 serpin 2 815941
ath DRD1 SNF2 domain-containing protein / helicase domain-containing protein 816136
ath MCM4 Minichromosome maintenance (MCM2/3/5) family protein 816142
ath NERD GW repeat- and PHD finger-containing protein NERD 816147
ath CHR8 chromatin remodeling 8 816391
ath NAP1;2 nucleosome assembly protein 1;2 816467
ath RECA2 recA DNA recombination family protein 816468
ath FVE Transducin family protein / WD-40 repeat family protein 816471
ath MCM10 minichromosome maintenance 10 816632
ath RNR1 ribonucleotide reductase 1 816715
ath EME1A essential meiotic endonuclease 1A 816716
ath EME1B essential meiotic endonuclease 1B 816748
ath ALKBH2 oxidoreductase, 2OG-Fe(II) oxygenase family protein 816759
ath CKA3 Protein kinase superfamily protein 816838
ath RPA2 replicon protein A2 816985
ath AGO4 Argonaute family protein 817246
ath CKS1 cyclin-dependent kinase-subunit 1 817340
ath AT2G28130 actin protein 2/3 complex subunit-like protein 817359
ath RAD51B DNA repair (Rad51) family protein 817404
ath PCNA2 proliferating cell nuclear antigen 2 817506
ath CDC6 cell division control 6 817518
ath RDM4 RNA-directed DNA methylation 4 817578
ath CDT1A CDT1-like protein A 817684
ath PARP1 poly(ADP-ribose) polymerase 2 817690
ath ATNTH1 DNA glycosylase superfamily protein 817703
ath RAD50 DNA repair-recombination protein (RAD50) 817756
ath AGO6 Argonaute family protein 817856
ath COP1 Transducin/WD40 repeat-like superfamily protein 817857
ath AT2G33640 DHHC-type zinc finger family protein 817930
ath SUVH5 SU(VAR)3-9 homolog 5 818083
ath FIS2 VEFS-Box of polycomb protein 818136
ath MMZ3 MMS ZWEI homologue 3 818179
ath DML1 demeter-like 1 818224
ath ORC2 origin recognition complex second largest subunit 2 818332
ath NRPD1B nuclear RNA polymerase D1B 818591
ath AtCaN2 Ca(2+)-dependent nuclease family protein 818634
ath ETG1 E2F target protein 1 (ETG1) 818650
ath ARP apurinic endonuclease-redox protein 818744
ath UVI4 uv-b-insensitive 4 818827
ath RAD51C RAS associated with diabetes protein 51C 819136
ath AT2G47210 myb-like transcription factor family protein 819334
ath SWI3A SWITCH/sucrose nonfermenting 3A 819375
ath DRT102 DNA-damage-repair/toleration protein (DRT102) 819648
ath ERCC1 nucleotide repair protein 819685
ath BRCC36B Mov34/MPN/PAD-1 family protein 819866
ath IBM1 Transcription factor jumonji (jmjC) domain-containing protein 819952
ath TK1a Thymidine kinase 819971
ath AT3G09100 mRNA capping enzyme family protein 820064
ath MCM8 minichromosome maintenance 8 820123
ath DML2 demeter-like 2 820162
ath RECA3 RECA homolog 3 820177
ath GYRB1 DNA gyrase subunit B 820189
ath AT3G12040 DNA-3-methyladenine glycosylase (MAG) 820378
ath ARP5 actin-related protein 5 820416
ath AT3G12710 DNA glycosylase superfamily protein 820453
ath ATSPO11-1 Spo11/DNA topoisomerase VI, subunit A protein 820506
ath NAP1;4 nucleosome assembly protein1;4 820589
ath AT3G14890 phosphoesterase 820718
ath AT3G15120 P-loop containing nucleoside triphosphate hydrolases superfamily protein 820743
ath UVR3 DNA photolyase family protein 820804
ath AT3G15960 mismatched DNA binding / ATP binding protein 820840
ath DRM3 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 820994
ath RPA32B Replication protein A, subunit RPA32 821187
ath RAD23C Rad23 UV excision repair protein family 821195
ath NBS1 nijmegen breakage syndrome 1 821254
ath DCL2 dicer-like 2 821300
ath MSH2 MUTS homolog 2 821383
ath KRP6 KIP-related protein 6 821449
ath RAD54 DNA repair/recombination protein 821455
ath AT3G20260 DUF1666 family protein (DUF1666) 821570 IEA
ath MSH5 MUTS-homologue 5 821593
ath AT3G20490 Rho GTPase-activating protein 821595
ath POLGAMMA1 polymerase gamma 1 821600
ath TOP6B topoisomerase 6 subunit B 821626
ath PLT1 Integrase-type DNA-binding superfamily protein 821632
ath RDM1 RNA-DIRECTED DNA METHYLATION 1 821839
ath DMC1 DNA repair (Rad51) family protein 821860 IDA
ath RNR2A ribonucleotide reductase 2A 821937
ath NRPD2A nuclear RNA polymerase D2A 821960
ath TOPII topoisomerase II 821972
ath MSH1 MUTL protein homolog 1 822021
ath CDC45 cell division cycle 45 822101
ath SNM1 DNA repair metallo-beta-lactamase family protein 822280
ath DRB3 dsRNA-binding protein 3 822310 IEA
ath TSO2 Ferritin/ribonucleotide reductase-like family protein 822324
ath RCK DNA helicase ROCK-N-ROLLERS 822395
ath UVH3 5'-3' exonuclease family protein 822427
ath AT3G30730 uncharacterized protein 822811
ath AT3G32920 P-loop containing nucleoside triphosphate hydrolases superfamily protein 823055
ath DCL3 dicer-like 3 823508
ath AT3G46320 Histone superfamily protein 823777
ath DUT1 DUTP-PYROPHOSPHATASE-LIKE 1 823847
ath AT3G47830 DNA glycosylase superfamily protein 823937
ath DEL1 DP-E2F-like 1 823971
ath ATM Serine/Threonine-kinase ATM-like protein 823975
ath IDN2 XH/XS domain-containing protein 824027
ath CDC2 cell division control 2 824036
ath AT3G48900 single-stranded DNA endonuclease family protein 824051 IDA
ath DMS3 defective in meristem silencing 3 824086
ath CKA2 casein kinase II, alpha chain 2 824162
ath KRP2 KIP-related protein 2 824226
ath AT3G51690 PIF1 helicase 824332
ath AT3G51700 PIF1 helicase 824333
ath GR1 protein gamma response 1 824375
ath UEV1D-4 ubiquitin E2 824422
ath AT3G52630 Nucleic acid-binding, OB-fold-like protein 824429
ath CDKB1;1 cyclin-dependent kinase B1;1 824585
ath CDT1B CDT1-like protein B 824636
ath AT3G54760 dentin sialophosphoprotein-like protein 824641
ath INO80 DNA helicase INO80-like protein 824897
ath AT3G58930 F-box/RNI-like superfamily protein 825062 IEA
ath AT3G61420 BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins) 825315
ath EDA35 temperature sensing protein-like protein 825894
ath ORTHL ORTHRUS-like protein 826420
ath AT4G08990 DNA (cytosine-5-)-methyltransferase family protein 826477
ath MLH1 MUTL-homologue 1 826493
ath CTC1 conserved telomere maintenance component 1 826554
ath DET1 light-mediated development protein 1 / deetiolated1 (DET1) 826609
ath ORC1B origin of replication complex 1B 826875
ath MEE57 DNA (cytosine-5-)-methyltransferase family protein 826994
ath DMT2 DNA methyltransferase 2 827052
ath PRD1 putative recombination initiation defect 1 827058
ath AT4G14310 Transducin/WD40 repeat-like superfamily protein 827072
ath ORC1A origin recognition complex 1 827121
ath AT4G14970 fanconi anemia group D2 protein 827156
ath AT4G15475 F-box/RNI-like superfamily protein 827219
ath NRPD4 RNA polymerase II, Rpb4, core protein 827277
ath MSH4 MUTS-like protein 4 827450
ath SNI1 negative regulator of systemic acquired resistance (SNI1) 827577
ath CMT2 chromomethylase 2 827640
ath JMJ14 JUMONJI 14 827788
ath BRCA1 breast cancer susceptibility1 827854
ath PMS1 DNA mismatch repair protein 827997
ath PARP2 poly(ADP-ribose) polymerase 828049
ath AT4G01180 XH/XS domain-containing protein 828058
ath MSH6 MUTS homolog 6 828147
ath PRL Minichromosome maintenance (MCM2/3/5) family protein 828153
ath BRCA2(IV) BREAST CANCER 2 like 2A 828230
ath ENDO4 endonuclease 4 828244
ath ENDO3 endonuclease 3 828245
ath ENDO5 endonuclease 5 828246 IDA
ath FZR2 FIZZY-related 2 828390
ath AT4G24710 pachytene checkpoint-like protein 828573
ath SRS2 P-loop containing nucleoside triphosphate hydrolases superfamily protein 828615
ath MSH3 homolog of DNA mismatch repair protein MSH3 828659
ath NAP1;1 nucleosome assembly protein1;1 828717
ath AT4G26170 transcription factor 828723
ath PPX1 protein phosphatase X 1 828779
ath ATMND1 Mnd1 family protein 829038
ath AT4G29560 fanconi anemia group E protein FANCE protein 829077
ath ORC5 origin recognition complex protein 5 829114
ath MUS81 Restriction endonuclease, type II-like superfamily protein 829211
ath AT4G31150 endonuclease V family protein 829243
ath AT4G31210 DNA topoisomerase, type IA, core 829248
ath AT4G31270 sequence-specific DNA binding transcription factor 829254
ath CTF7 protein CTF7 829267
ath AT4G31880 transcriptional regulator 829318
ath AT4G32700 MUS308 and mammalian DNA polymerase-like protein 829406
ath SSN2 zinc finger SWIM domain protein 829537
ath DML3 demeter-like protein 3 829552
ath CHB3 DNA-binding family protein 829594 IEA
ath MLH3 MUTL protein homolog 3 829704
ath RecQl3 DEAD/DEAH box RNA helicase family protein 829727
ath NRPB1 RNA polymerase II large subunit 829734 IEA
ath AT4G36050 endonuclease/exonuclease/phosphatase family protein 829761
ath CEN2 centrin 2 829855
ath CYCD5;1 cyclin d5;1 829917
ath KAK HECT ubiquitin protein ligase family protein KAK 830017
ath AT4G40030 Histone superfamily protein 830164
ath AT4G40040 Histone superfamily protein 830165
ath GYRB2 DNA GYRASE B2 830291
ath KTF1 kow domain-containing transcription factor 1 830308
ath SIM cyclin-dependent protein kinase inhibitor 830326
ath DME HhH-GPD base excision DNA repair family protein 830335
ath AtPOT1b Nucleic acid-binding, OB-fold-like protein 830519
ath SMC6A structural maintenance of chromosomes 6A 830659
ath RPA70B RPA70-kDa subunit B 830696
ath AT5G08110 UBQ, helicase-c and DEAD-like helicase domain-containing protein 830705
ath ILP1 GC-rich sequence DNA-binding factor-like protein 830755
ath HAM2 histone acetyltransferase of the MYST family 2 830834
ath AT5G10980 Histone superfamily protein 830965
ath ABAP1 ARMADILLO BTB protein 1 831145
ath TBP1 telomeric DNA binding protein 1 831227
ath SUVH4 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like protein 831244
ath CHC1 SWIB/MDM2 domain superfamily protein 831267
ath DRM2 domains rearranged methyltransferase 2 831315
ath TDP1 tyrosyl-DNA phosphodiesterase-like protein 831369
ath DRM1 domains rearranged methylase 1 831390
ath SYN4 sister chromatid cohesion 1 protein 4 831487
ath ORC3 origin recognition complex subunit 3 831530
ath TERT telomerase reverse transcriptase 831548
ath BRCA2B BRCA2-like B 831710
ath AT5G03750 E3 ubiquitin-protein ligase 831735
ath AT5G03450 Transducin/WD40 repeat-like superfamily protein 831835
ath DPB Transcription factor DP 831847
ath DRT101 phosphoglucosamine mutase-like protein 831926
ath DCL4 dicer-like 4 832154
ath RAD51 RAS associated with diabetes protein 51 832208 IDA,TAS
ath emb1379 embryo defective 1379 832240
ath AT5G21900 RNI-like superfamily protein 832250
ath RFC1 replication factor C1 832261
ath RAD5 DNA/RNA helicase protein 832338
ath AT5G23610 DYAD protein 832427
ath GMI1 gamma-irradiation and mitomycin c induced 1 832495
ath BIN4 double-stranded DNA binding protein 832534
ath CRY3 cryptochrome 3 832554
ath CYCA2;1 cyclin a2;1 832610
ath DPD1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 832752
ath RECQSIM RECQ helicase SIM 832830
ath AT5G28690 carboxylate clamp-TPR protein (DUF1685) 832976
ath ASF1B anti- silencing function 1b 833791
ath RAD23D Rad23 UV excision repair protein family 833835
ath VIM3 Zinc finger (C3HC4-type RING finger) family protein 833951
ath ATR Ataxia telangiectasia-mutated and RAD3-like protein 834082
ath SYN2 Rad21/Rec8-like family protein 834084
ath UVH1 Restriction endonuclease, type II-like superfamily protein 834117
ath AT5G44010 fanconi anemia group F protein (FANCF) 834424
ath MCM6 minichromosome maintenance (MCM2/3/5) family protein 834492
ath AT5G44680 DNA glycosylase superfamily protein 834497
ath POLH Y-family DNA polymerase H 834503
ath OSB3 organellar single-stranded DNA binding protein 3 834508
ath CUL4 cullin4 834663
ath MCM3 Minichromosome maintenance (MCM2/3/5) family protein 834670
ath UBP21 ubiquitin-specific protease 21 834717
ath AT5G47690 binding protein 834820
ath RAD52-2 cobalt ion-binding protein 834838
ath AtSPO22 Tetratricopeptide repeat (TPR)-like superfamily protein 834894
ath XRI1 x-ray induced transcript 1 834930
ath SLD5 DNA replication protein-like protein 834960
ath AT5G49110 fanconi anemia group I-like protein 834970
ath MET1 methyltransferase 1 834975
ath AT5G50340 DNA repair protein RadA-like protein 835101
ath AT5G50930 Histone superfamily protein 835166
ath SWI1 SWITCH1 835207
ath SHOC1 shortage in chiasmata 1 835305
ath AT5G52950 LIM domain protein 835372
ath AT5G54090 DNA mismatch repair protein MutS, type 2 835495
ath PPX2 protein phosphatase X 2 835619
ath TOP1ALPHA DNA topoisomerase I alpha 835623
ath TOP1BETA DNA topoisomerase 1 beta 835624
ath EDM2 ENHANCED DOWNY MILDEW 2 835632
ath ET2 effector of transcription2 835780
ath NAP1;3 nucleosome assembly protein 1;3 835797
ath ATLIG4 DNA ligase IV 835822
ath XRCC3 homolog of X-ray repair cross complementing 3 (XRCC3) 835850
ath MPS1 multipolar spindle 1 835898
ath AT5G57970 DNA glycosylase superfamily protein 835908
ath AT5G58020 RTF2 RING-finger protein 835914
ath ROS3 RNA-binding (RRM/RBD/RNP motifs) family protein 835925
ath DDB2 damaged DNA binding 2 835990
ath AT5G59390 XH/XS domain-containing protein 836058
ath VIP2 VIRE2 interacting protein 2 836092
ath PNM1 Pentatricopeptide repeat (PPR) superfamily protein 836217
ath MIM P-loop containing nucleoside triphosphate hydrolases superfamily protein 836267
ath RMI1 recQ-mediated instability protein (DUF1767) 836473
ath TOP3A topoisomerase 3alpha 836513
ath XRCC2 homolog of X-ray repair cross complementing 2 (XRCC2) 836573
ath HAM1 histone acetyltransferase of the MYST family 1 836582
ath FAS2 Transducin/WD40 repeat-like superfamily protein 836584
ath ICU2 DNA-directed DNA polymerase 836845
ath CKA1 casein kinase alpha 1 836873
ath NTH2 endonuclease III 2 837100
ath AT1G05910 cell division cycle protein 48-related / CDC48-like protein 837101
ath AT1G06590 anaphase-promoting complex subunit 837170
ath NIH nuclear DEIH-boxhelicase 837177 ISS
ath STN1 Nucleic acid-binding, OB-fold-like protein 837223
ath AT1G07270 Cell division control, Cdc6 837238
ath AT1G07660 Histone superfamily protein 837279
ath RAD51D DNA repair RAD51-like protein 837289
ath LIG1 DNA ligase 1 837333
ath AT1G08390 recQ-mediated instability-like protein 837359
ath AT1G01880 5'-3' exonuclease family protein 837373 IDA
ath ATRX P-loop containing nucleoside triphosphate hydrolases superfamily protein 837382
ath emb2411 DNA replication helicase 837406
ath AT1G09060 JmjC domain protein JMJ24 837427
ath AT1G09200 Histone superfamily protein 837440
ath Pol{lambda} DNA polymerase lambda (POLL) 837592
ath RECQ4A DNA helicase (RECQl4A) 837636
ath BFN1 bifunctional nuclease i 837660
ath PHR1 photolyase 1 837792
ath AT1G12400 Nucleotide excision repair, TFIIH, subunit TTDA 837795
ath AT1G12790 DNA ligase-like protein 837835
ath AHP2 Tat-binding protein 1(Tbp-1)-interacting protein (TBPIP) 837893
ath WHY1 ssDNA-binding transcriptional regulator 838003
ath SDS Cyclin family protein 838040
ath SHH1 SAWADEE HOMEODOMAIN protein 838088
ath CYCA2;3 CYCLIN A2;3 838127
ath AT1G15940 Tudor/PWWP/MBT superfamily protein 838164
ath AT1G15970 DNA glycosylase superfamily protein 838167
ath RAD23A Rad23 UV excision repair protein family 838188
ath KU70 ATP-dependent DNA helicase 2 subunit Ku70-like protein 838268
ath AT1G18680 HNH endonuclease domain-containing protein 838449
ath NRP2 NAP1-related protein 2 838462
ath TTN10 GINS complex protein 838490
ath AT1G19860 Zinc finger C-x8-C-x5-C-x3-H type family protein 838574
ath OGG1 8-oxoguanine-DNA glycosylase 1 838775
ath ZYP1a Myosin heavy chain-related protein 838831
ath ZYP1b Myosin heavy chain-related protein 838834
ath MMZ1 MMS ZWEI homologue 1 838935
ath ORC6 origin recognition complex protein 6 839227
ath PRD3 putative recombination initiation defects 3 839243
ath AXR1 NAD(P)-binding Rossmann-fold superfamily protein 839286
ath BARD1 breast cancer associated RING 1 839329
ath GTF2H2 general transcription factor II H2 839332
ath UVH6 RAD3-like DNA-binding helicase protein 839557
ath AT1G03180 non-structural protein 839560
ath ATCSA-1 Transducin/WD40 repeat-like superfamily protein 839677
ath AT1G29850 double-stranded DNA-binding family protein 839863
ath DRT111 D111/G-patch domain-containing protein 839927
ath RECQL2 RECQ helicase L2 840026
ath AT1G31760 SWIB/MDM2 domain superfamily protein 840063
ath AT1G34770 melanoma-associated antigen G1-like protein 840381
ath FANCM DEAD/DEAH box RNA helicase family protein 840448
ath MCM2 minichromosome maintenance (MCM2/3/5) family protein 841056
ath ATE2F2 winged-helix DNA-binding transcription factor family protein 841202
ath KU80 Ku80 family protein 841223
ath AT1G48360 zinc ion binding/nucleic acid binding/hydrolase 841256
ath RHL1 root hair initiation protein root hairless 1 (RHL1) 841258
ath AT1G48560 uncharacterized protein 841277
ath AT1G48580 nuclear localized protein 841279
ath AT1G49980 DNA/RNA polymerases superfamily protein 841422
ath POLGAMMA2 polymerase gamma 2 841506
ath PLT2 Integrase-type DNA-binding superfamily protein 841542
ath MMH-1 MUTM homolog-1 841681
ath HEI10 RING/U-box superfamily protein 841784
ath AT1G54840 HSP20-like chaperones superfamily protein 841923
ath AT1G55750 BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins) 842024
ath AT1G55915 zinc ion binding protein 842042
ath MDO1 telomere-capping, CST complex subunit 842079
ath VIM5 zinc finger (C3HC4-type RING finger) family protein 842155
ath VIM1 Zinc finger (C3HC4-type RING finger) family protein 842157
ath AT1G60460 uncharacterized protein 842341
ath RECQ4B RECQ helicase L4B 842384
ath SPO11-2 sporulation 11-2 842702
ath SRP3 serpin 3 842706
ath AT1G65070 DNA mismatch repair protein MutS, type 2 842815
ath FAS1 chromatin assembly factor-1 (FASCIATA1) (FAS1) 842858
ath VIM4 Zinc finger (C3HC4-type RING finger) family protein 842917
ath VIM2 Zinc finger (C3HC4-type RING finger) family protein 842919
ath LIG6 DNA LIGASE 6 842991
ath SGA2 ASF1 like histone chaperone 842992
ath ASY1 DNA-binding HORMA family protein 843058
ath REV3 recovery protein 3 843071
ath ENDO2 endonuclease 2 843158
ath AE7 MIP18 family protein (DUF59) 843160 IMP
ath TCP15 TCP family transcription factor 843305
ath CMT3 chromomethylase 3 843313
ath MMZ2 MMS ZWEI homologue 2 843403
ath ATWHY2 WHIRLY 2 843467
ath RAD52-1 cobalt ion binding protein 843472
ath AT1G72270 nucleolar pre-ribosomal-associated protein 843559
ath NRP1 NAP1-related protein 1 843797
ath AT1G75090 DNA glycosylase superfamily protein 843846
ath ASHH1 SET domain group 26 844005
ath MEI1 transcription coactivator 844068
ath AT1G77600 ARM repeat superfamily protein 844095
ath POLD3 DNA-directed DNA polymerase 844201
ath UBC35 ubiquitin-conjugating enzyme 35 844224
ath RECA1 recA DNA recombination family protein 844246
ath RAD23B Rad23 UV excision repair protein family 844304
ath AT1G79950 RAD3-like DNA-binding helicase protein 844335
ath PSF1 partner of SLD five 1 844359
ath BRCC36A Mov34/MPN/PAD-1 family protein 844361
ath ATXRCC1 BRCT domain-containing DNA repair protein 844382
ath AT1G80810 Tudor/PWWP/MBT superfamily protein 844420
ath AT1G80850 DNA glycosylase superfamily protein 844424
ath AT2G33793 DNA ligase-like protein 2745578
ath AT1G13635 DNA glycosylase superfamily protein 2745751
ath AT4G04957 RRM in demeter (DUF1985) 6240683
ath AT4G26701 DNA binding / DNA topoisomerase type I 6241184
ath AT1G44895 minichromosone maintenance protein 28717331
ath AT3G30739 uncharacterized protein 28719349
ath AT5G01675 28720403


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