KEGG 04712 Circadian rhythm - plant

39  ath genes in this database.
95  gma genes in this database.
42  sly genes in this database.
41  osa genes in this database.
67  zma genes in this database.
65  bra genes in this database.
43  vvi genes in this database.
56  ppo genes in this database.
57  mtr genes in this database.
163  tae genes in this database.

List of genes in ath


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
816394 C, N PHYB phytochrome B
816837 C, C AT2G23070 Protein kinase superfamily protein
816838 O, N CKA3 Protein kinase superfamily protein
817134 O, N ELF3 hydroxyproline-rich glycoprotein family protein
817857 O, N COP1 Transducin/WD40 repeat-like superfamily protein
819076 O, N CKB4 casein kinase II beta subunit 4
819242 O, N SPA1 SPA (suppressor of phyA-105) protein family
819292 O, N PRR9 pseudo-response regulator 9
819296 O, N CCA1 circadian clock associated 1
821027 O, N HYH HY5-homolog
824162 S, V CKA2 casein kinase II, alpha chain 2
825196 O, N CKB3 casein kinase II beta chain 3
826470 O, C CRY1 cryptochrome 1
826712 O, N SPA2 SPA1-related 2
827484 O, N CKB2 casein kinase II beta chain 2
827785 O, C TSF PEBP (phosphatidylethanolamine-binding protein) family protein
830730 O, N TCP11 TCP family transcription factor
830996 C, N HY5 Basic-leucine zipper (bZIP) transcription factor family protein
831241 O, Y TT4 Chalcone and stilbene synthase family protein
831441 O, N CO B-box type zinc finger protein with CCT domain-containing protein
831793 O, N PRR7 pseudo-response regulator 7
832392 O, N AT5G23280 TCP family transcription factor
832438 O, C RUP2 Transducin/WD40 repeat-like superfamily protein
832518 O, N PRR5 two-component response regulator-like protein
834754 O, C CKB1 casein kinase II beta chain 1
835301 C, Y RUP1 Transducin/WD40 repeat-like superfamily protein
835842 O, N ZTL Galactose oxidase/kelch repeat superfamily protein
836132 O, N PRR3 pseudo-response regulator 3
836259 O, N TOC1 CCT motif -containing response regulator protein
836364 O, N CDF1 cycling DOF factor 1
836873 S, Y CKA1 casein kinase alpha 1
837479 O, N PIF3 phytochrome interacting factor 3
837483 O, Y PHYA phytochrome A
838883 O, P GI gigantea protein (GI)
839341 O, N LHY Homeodomain-like superfamily protein
839529 O, Y CRY2 cryptochrome 2
842120 O, N PAP1 production of anthocyanin pigment 1
842859 O, Y FT PEBP (phosphatidylethanolamine-binding protein) family protein
843133 O, N FKF1 flavin-binding, kelch repeat, f box 1


List of genes in gma


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
547810 M, C_M PHYA phytochrome A
732575 O, Y CHS1 chalcone synthase 1
778086 O, N MYB114 MYB transcription factor MYB114
778143 C, N BZIP69 bZIP transcription factor bZIP69
780540 O, N LCL3 LHY1/CCA1-like protein
100101859 O, N LCL4 LHY1/CCA1-like protein
100170701 O, Y CHS8 chalcone synthase
100233233 O, N CRY1a cryptochrome 1
100233234 O, C LOC100233234 cryptochrome 2
100271888 O, N LCL1 late elongated hypocotyl and circadian clock associated-1-like protein 1
100271889 O, N TOC1 timing of CAB expression 1
100301887 O, N ZTL1 PAS protein ZEITLUPE 1
100301888 O, N ZTL2 clock-associated PAS protein ZEITLUPE 2
100301889 O, Y FKF1 circadian clock-associated FKF1
100775264 O, Y CHS13 chalcone synthase 13
100776388 M, C LOC100776388 casein kinase II subunit alpha
100776980 O, N LOC100776980 protein SPA1-RELATED 2
100777119 O, N LOC100777119 two-component response regulator-like PRR95
100778303 O, N LOC100778303 protein SPA1-RELATED 2
100778957 O, N LOC100778957 transcription factor MYB1
100779044 O, P GIGANTEA protein GIGANTEA
100779346 O, N LOC100779346 two-component response regulator-like APRR5
100779649 O, Y CHS4A chalcone synthase 4a
100780095 O, N LOC100780095 putative casein kinase II subunit beta
100781509 O, Y FT3B protein FLOWERING LOCUS T-like
100782271 C, N LOC100782271 transcription factor TCP7
100782897 O, Y CHS7 chalcone synthase 7
100784300 O, N LOC100784300 protein SPA1-RELATED 2
100784315 O, N LOC100784315 putative casein kinase II subunit beta
100784383 O, N LOC100784383 two-component response regulator-like APRR9
100784848 O, N LOC100784848 putative casein kinase II subunit beta
100785554 O, Y CHS11 chalcone synthase 11
100785796 O, N PRR3A two-component response regulator PRR3A
100786264 O, N LOC100786264 transcription factor TCP7
100786522 O, N LOC100786522 two-component response regulator-like APRR1
100786551 O, E LOC100786551 cryptochrome-1-like
100788038 O, N LOC100788038 protein EARLY FLOWERING 3
100788048 O, Y CHS10 chalcone synthase 10
100788171 O, N LOC100788171 E3 ubiquitin-protein ligase COP1
100789075 O, Y CHS3C chalcone synthase 3
100789357 O, N LOC100789357 putative casein kinase II subunit beta
100790763 M, C E4 phytochrome A
100790997 O, Y CHS9 chalcone synthase 9
100791098 C, C PHYA3 phytochrome A-2-like
100791524 O, Y CHS3 chalcone synthase 3
100791698 O, N LOC100791698 two-component response regulator-like APRR9
100792581 O, Y CHS4B chalcone synthase 4b
100793561 O, N ELF3A protein EARLY FLOWERING 3a
100793573 O, N LOC100793573 putative casein kinase II subunit beta-4
100794865 C, C LOC100794865 phytochrome B-2-like
100794974 O, N LOC100794974 transcription factor PIF3
100795254 O, N LOC100795254 transcription factor TCP7
100796933 O, N LOC100796933 two-component response regulator-like APRR7
100797839 O, C LOC100797839 cryptochrome-1-like
100799005 O, N LOC100799005 transcription factor TCP7
100799267 O, N LOC100799267 protein SUPPRESSOR OF PHYA-105 1
100799304 O, N LOC100799304 putative casein kinase II subunit beta
100799728 O, N LOC100799728 two-component response regulator-like APRR1
100799831 C, C PHYB phytochrome B-like
100800443 O, N LOC100800443 transcription factor TCP7
100800578 O, P E2 protein GIGANTEA
100802144 O, N LOC100802144 protein SUPPRESSOR OF PHYA-105 1
100802674 O, N LOC100802674 two-component response regulator-like PRR95
100802828 O, N ZTL adagio protein 1
100803909 O, Y FT3A protein FLOWERING LOCUS T-like
100804665 O, N LOC100804665 transcription factor PIF3
100805523 O, N LOC100805523 adagio protein 1
100806454 O, N LOC100806454 two-component response regulator-like APRR7
100808627 O, C LOC100808627 cryptochrome-2-like
100809433 O, Y CHS6 chalcone synthase 6
100809490 O, N LOC100809490 two-component response regulator-like PRR95
100810748 O, N LOC100810748 casein kinase II subunit alpha-2
100811759 O, Y CRY2B cryptochrome-2b
100812253 O, S LOC100812253 adagio protein 3
100813452 C, N LOC100813452 protein SPA1-RELATED 2
100813528 O, N LOC100813528 casein kinase II subunit alpha-2
100813745 O, N LOC100813745 E3 ubiquitin-protein ligase COP1
100813917 O, N LOC100813917 two-component response regulator-like APRR1
100814951 O, Y FT2A protein FLOWERING LOCUS T
100815428 O, C LOC100815428 cryptochrome-1-like
100817795 M, M LOC100817795 casein kinase II subunit alpha-4, chloroplastic
100818279 O, N ELF3B protein EARLY FLOWERING 3b
100818543 O, N LOC100818543 transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15
100819679 M, Y LOC100819679 casein kinase II subunit alpha-2
100820110 O, N LOC100820110 ELF3-like protein 2
100820151 O, N LOC100820151 transcription factor PIF3
100820471 S, C LOC100820471 casein kinase II subunit alpha-1-like
102659557 O, N LOC102659557 transcription factor PIF3
102663074 O, Y_N LOC102663074 chalcone synthase 3
102663657 O, N LOC102663657 ELF3-like protein 2
106794283 O, Y CHS3B chalcone synthase 3
106799718 O, Y CHS5 chalcone synthase 5
114827817 O, Y CHS2 chalcone synthase 2
121175284 O, Y LOC121175284 chalcone synthase 1
121175285 O, Y LOC121175285 chalcone synthase 3


List of genes in sly


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
543547 O, N COP1 putative E3 ubiquitin-protein ligase COP1
543596 O, N CRY2 cryptochrome 2
543688 M, C Cry1b cryptochrome 1b
543733 C, N HY5 THY5 protein
544176 M, N phyA Phytochrome A
544219 O, C CRY1a cryptochrome 1
778294 O, Y CHS1 chalcone synthase
778295 M, Y CHS2 chalcone synthase
100736457 O, N TCP14 TCP transcription factor 14
100736520 O, N TCP15 TCP transcription factor 15
101244750 O, Y LOC101244750 casein kinase II subunit alpha-2
101245061 O, C LOC101245061 chalcone synthase B
101245619 O, N LOC101245619 protein HEADING DATE 3B-like
101245655 O, N LOC101245655 putative casein kinase II subunit beta-4
101246029 O, Y SFT protein single flower truss
101246108 C, C LOC101246108 casein kinase II subunit alpha
101246833 O, N LOC101246833 casein kinase II subunit beta-3
101249027 O, N LOC101249027 protein SUPPRESSOR OF PHYA-105 1-like
101249224 O, N LOC101249224 two-component response regulator-like PRR73
101249698 O, N LOC101249698 E3 ubiquitin-protein ligase COP1-like
101249856 O, N LOC101249856 putative casein kinase II subunit beta-4
101250283 O, N LOC101250283 two-component response regulator-like APRR5
101254785 O, C LOC101254785 two-component response regulator-like PRR37
101255788 O, P LOC101255788 protein GIGANTEA
101256338 O, Y LOC101256338 casein kinase II subunit alpha-1
101256908 O, N LOC101256908 adagio protein 3
101257119 O, N LOC101257119 putative casein kinase II subunit beta-4
101258346 O, N LOC101258346 protein GIGANTEA-like
101259163 O, N LOC101259163 two-component response regulator-like APRR1
101259391 O, C LOC101259391 COP1-like protein
101259425 O, N LOC101259425 two-component response regulator-like APRR1
101261662 O, N LOC101261662 protein LHY
101262847 M, N PHYB1 phytochrome B1
101262866 O, N LOC101262866 two-component response regulator-like APRR9
101262932 O, N LOC101262932 adagio protein 1
101263032 O, Y LOC101263032 chalcone synthase J
101263834 O, N LOC101263834 protein SPA1-RELATED 2
101265040 O, N LOC101265040 ELF3-like protein 2
101266107 O, Y LOC101266107 chalcone synthase J-like
101267355 O, N LOC101267355 transcription factor PIF3
101267430 O, N LOC101267430 protein EARLY FLOWERING 3
101268174 O, N LOC101268174 protein EARLY FLOWERING 3


List of genes in osa


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
4324585 C, C LOC4324585 protein RICE FLOWERING LOCUS T 1-like
4325329 O, N LOC4325329 protein GIGANTEA-like
4327916 O, N LOC4327916 transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15-like
4327931 O, N LOC4327931 ELF3-like protein 2
4328313 O, N LOC4328313 putative adagio-like protein 2
4328662 C, N LOC4328662 transcription factor HY5
4329738 O, Y LOC4329738 cryptochrome-1
4330000 O, N LOC4330000 two-component response regulator-like PRR1
4330080 M, C LOC4330080 transcription factor TCP7
4330868 O, N LOC4330868 E3 ubiquitin-protein ligase COP1
4332003 O, Y LOC4332003 casein kinase II subunit alpha-2
4332464 O, N LOC4332464 two-component response regulator-like PRR73
4332623 M, C LOC4332623 phytochrome B-like
4333930 M, C LOC4333930 phytochrome A-like
4334206 M, C LOC4334206 casein kinase II subunit alpha-2
4336008 O, Y LOC4336008 cryptochrome-1
4336228 O, Y LOC4336228 protein FLOWERING LOCUS T
4339663 O, N LOC4339663 protein SUPPRESSOR OF PHYA-105 1
4340087 O, N LOC4340087 protein HEADING DATE 3B-like
4340185 O, C LOC4340185 protein HEADING DATE 3A-like
4341272 O, Y LOC4341272 protein FLOWERING LOCUS T
4341923 O, Y LOC4341923 adagio-like protein 1
4342248 O, N LOC4342248 casein kinase II subunit alpha-2
4342725 O, Y LOC4342725 chalcone synthase 2
4343287 O, N LOC4343287 putative casein kinase II subunit beta-4
4344399 O, N LOC4344399 two-component response regulator-like PRR37
4344703 O, N LOC4344703 protein LHY
4347674 O, N LOC4347674 two-component response regulator-like PRR95
4349414 O, N LOC4349414 putative casein kinase II subunit beta-4
4349831 O, N LOC4349831 two-component response regulator-like APRR3
4350636 O, Y LOC4350636 chalcone synthase 1-like
4350698 O, Y_N LOC4350698 adagio-like protein 3
9268282 O, Y LOC9268282 protein FLOWERING LOCUS T
9268301 O, N LOC9268301 transcription factor HY5
9270575 M, N LOC9270575 cryptochrome-1
9271430 O, Y LOC9271430 protein FLOWERING LOCUS T
9272106 O, N LOC9272106 transcription factor TCP7
107276210 O, Y LOC107276210 protein TWIN SISTER of FT
107277483 C, C LOC107277483 transcription factor TCP21
107279948 O, Y LOC107279948 WD repeat-containing protein RUP2
107280190 O, Y LOC107280190 protein FLOWERING LOCUS T-like


List of genes in zma


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
541823 O, N LOC541823 CK2 regulatory subunit B1
541824 O, N LOC541824 casein kinase II subunit beta-4
541825 O, Y LOC541825 protein kinase CK2 catalytic subunit CK2 alpha-3
542460 S, C LOC542460 CK2 protein kinase alpha 2
542628 O, N LOC542628 uncharacterized LOC542628
542637 O, Y LOC542637 Casein kinase II subunit alpha
100127523 O, Y ZCN14 ZCN14 protein
100127525 O, Y LOC100127525 ZCN16 protein
100127527 O, Y LOC100127527 ZCN18 protein
100127528 O, Y LOC100127528 ZCN19 protein
100127530 O, Y LOC100127530 uncharacterized LOC100127530
100147733 O, N LOC100147733 uncharacterized LOC100147733
100192868 O, N LOC100192868 uncharacterized LOC100192868
100192956 C, N LOC100192956 uncharacterized LOC100192956
100193188 M, C LOC100193188 uncharacterized LOC100193188
100194126 M, C LOC100194126 cryptochrome2
100272683 O, N LOC100272683 uncharacterized LOC100272683
100272803 O, N LOC100272803 uncharacterized LOC100272803
100273598 O, N LOC100273598 Two-component response regulator-like APRR9
100274243 O, N LOC100274243 uncharacterized LOC100274243
100274415 O, Y LOC100274415 chalcone synthase
100277533 O, C LOC100277533 uncharacterized LOC100277533
100278144 C, N LOC100278144 uncharacterized LOC100278144
100279342 O, N LOC100279342 E3 ubiquitin-protein ligase COP1
100279726 O, Y LOC100279726 Adagio protein 3
100280240 O, N LOC100280240 PseuodARR-B transcription factor
100281091 O, N LOC100281091 LHY protein
100281433 O, N LOC100281433 uncharacterized LOC100281433
100282642 O, Y LOC100282642 chalcone synthase
100283448 O, N LOC100283448 casein kinase II subunit beta-4
100284201 O, N LOC100284201 uncharacterized LOC100284201
100285170 O, N LOC100285170 two-component response regulator-like PRR95
100286122 , LOC100286122 ubiquitin ligase protein COP1
100286123 C, N LOC100286123 uncharacterized LOC100286123
100381775 O, N LOC100381775 Two-component response regulator-like APRR9
100381811 C, C LOC100381811 phytochromeB2
100382453 O, N LOC100382453 uncharacterized LOC100382453
100383277 O, N LOC100383277 uncharacterized LOC100383277
100383534 O, N LOC100383534 uncharacterized LOC100383534
100383702 C, C LOC100383702 Phytochrome B
100383828 , LOC100383828 bZIP-type transcription factor pseudogene
100384276 O, N LOC100384276 Protein SUPPRESSOR OF PHYA-105 1
100384475 O, Y LOC100384475 uncharacterized LOC100384475
100502533 O, Y LOC100502533 cryptochrome 2
103625865 S, Y LOC103625865 casein kinase II subunit alpha-2
103626364 O, N LOC103626364 adagio-like protein 1
103626626 O, N LOC103626626 putative adagio-like protein 2
103627461 O, N LOC103627461 transcription factor TCP21
103628561 O, Y LOC103628561 protein FLOWERING LOCUS T
103629610 O, N LOC103629610 adagio-like protein 1
103629618 O, Y LOC103629618 casein kinase II subunit alpha-like
103630791 O, N LOC103630791 ELF3-like protein 2
103633010 O, Y LOC103633010 protein FLOWERING LOCUS T
103633607 O, N LOC103633607 two-component response regulator-like PRR37
103633683 M, C LOC103633683 two-component response regulator-like PRR1
103634871 C, N LOC103634871 transcription factor HY5
103635349 O, N LOC103635349 protein SUPPRESSOR OF PHYA-105 1
103638645 O, N LOC103638645 transcription factor HY5
103641361 C, N LOC103641361 transcription factor APG
103641861 O, C LOC103641861 transcription factor PCF1
103643916 M, C LOC103643916 phytochrome A-like
103644048 M, C LOC103644048 uncharacterized LOC103644048
103647963 O, N LOC103647963 two-component response regulator-like PRR37
103648678 O, N LOC103648678 two-component response regulator-like PRR1
103651094 O, N LOC103651094 two-component response regulator-like PRR1
109942013 O, Y LOC109942013 casein kinase II subunit alpha-4, chloroplastic
115101004 M, C LOC115101004 uncharacterized LOC115101004


List of genes in bra


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
103249166 O, P LOC103249166 protein GIGANTEA
103249168 O, N LOC103249168 protein EARLY FLOWERING 3
103827764 S, Y LOC103827764 casein kinase II subunit alpha-2
103827864 O, N LOC103827864 casein kinase II subunit beta-1
103828356 O, N LOC103828356 adagio protein 2
103830251 O, N LOC103830251 casein kinase II subunit beta-3
103833904 O, N LOC103833904 protein SPA1-RELATED 2
103836576 O, C LOC103836576 cryptochrome-2
103836661 O, N LOC103836661 protein LHY
103836793 O, Y LOC103836793 chalcone synthase 3
103837062 O, N LOC103837062 two-component response regulator-like APRR5
103837378 O, N LOC103837378 two-component response regulator-like APRR1
103838805 O, C CRY1 cryptochrome circadian clock 1
103839184 M, N LOC103839184 transcription factor HY5-like
103840918 S, C LOC103840918 casein kinase II subunit alpha-2
103841878 O, N LOC103841878 casein kinase II subunit beta-3
103842445 C, C LOC103842445 casein kinase II subunit alpha-4, chloroplastic
103843346 C, C LOC103843346 phytochrome A
103843349 O, N LOC103843349 transcription factor PIF3
103844260 M, M LOC103844260 cryptochrome-2
103844616 O, N LOC103844616 protein LHY
103845423 O, N LOC103845423 two-component response regulator-like APRR3
103846381 O, N LOC103846381 zinc finger protein CONSTANS
103846527 O, Y LOC103846527 chalcone synthase 1
103846737 C, N HY5 transcription factor HY5
103847150 O, N LOC103847150 transcription factor TCP21
103847424 O, N LOC103847424 two-component response regulator-like APRR7
103850461 O, N LOC103850461 two-component response regulator-like APRR7
103850694 O, N LOC103850694 transcription factor TCP21
103850763 C, N LOC103850763 transcription factor HY5
103850907 O, Y LOC103850907 chalcone synthase 3
103853778 O, N LOC103853778 casein kinase II subunit beta-1
103854548 O, Y LOC103854548 chalcone synthase
103854859 O, N LOC103854859 two-component response regulator-like APRR5
103854905 O, N LOC103854905 transcription factor TCP7
103855006 C, N LOC103855006 cyclic dof factor 1
103855586 O, N LOC103855586 casein kinase II subunit beta-2
103855775 O, N LOC103855775 transcription factor TCP21
103856040 O, Y LOC103856040 chalcone synthase 3
103857138 O, Y LOC103857138 WD repeat-containing protein RUP1
103858139 O, N LOC103858139 putative casein kinase II subunit beta-4
103858211 O, N LOC103858211 protein SUPPRESSOR OF PHYA-105 1
103859717 M, C LOC103859717 transcription factor HY5-like
103860589 O, N LOC103860589 two-component response regulator-like APRR1
103860926 O, N LOC103860926 casein kinase II subunit beta-2
103864062 O, N LOC103864062 casein kinase II subunit beta-2
103864119 O, Y LOC103864119 casein kinase II subunit beta-2
103864454 C, C LOC103864454 casein kinase II subunit alpha-4, chloroplastic
103864705 O, N LOC103864705 protein EARLY FLOWERING 3
103865427 O, M LOC103865427 transcription factor TCP7
103865631 O, N LOC103865631 WD repeat-containing protein RUP2
103866306 O, N LOC103866306 two-component response regulator-like APRR9
103866432 O, N LOC103866432 two-component response regulator-like APRR9
103866477 O, N LOC103866477 protein SUPPRESSOR OF PHYA-105 1
103866823 O, N LOC103866823 putative casein kinase II subunit beta-4
103867588 O, N LOC103867588 E3 ubiquitin-protein ligase COP1
103869673 O, N LOC103869673 transcription factor HY5-like
103869720 O, N LOC103869720 phytochrome B
103871725 M, N LOC103871725 transcription factor PIF3
103871728 M, C LOC103871728 phytochrome A
103874198 O, N LOC103874198 transcription factor TCP7
103874318 O, N LOC103874318 two-component response regulator-like APRR5
103874677 O, N LOC103874677 cyclic dof factor 1
117130946 O, N LOC117130946 transcription factor TCP21-like
117131903 O, N LOC117131903 transcription factor TCP21


List of genes in vvi


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
100232843 O, Y CHS chalcone synthase
100232994 O, Y FT flowering locus T
100240824 M, N PHYA phytochrome A
100244508 O, N LOC100244508 adagio protein 1
100244710 O, Y LOC100244710 stilbene synthase 1-like
100246063 O, N LOC100246063 E3 ubiquitin-protein ligase COP1
100246836 O, N LOC100246836 two-component response regulator-like PRR37
100247664 O, N LOC100247664 cryptochrome-1
100247781 O, N LOC100247781 transcription factor PIF3
100248310 O, N LOC100248310 E3 ubiquitin-protein ligase COP1
100248612 M, Y LOC100248612 chalcone synthase
100249144 O, N LOC100249144 adagio protein 1
100250535 M, N LOC100250535 protein LHY
100251425 O, Y LOC100251425 stilbene synthase 1-like
100253181 O, N LOC100253181 transcription factor TCP7
100253874 O, N LOC100253874 transcription factor PIF3
100253885 O, N LOC100253885 two-component response regulator-like APRR9
100254022 O, C LOC100254022 cryptochrome-1
100254197 O, P LOC100254197 protein GIGANTEA
100255961 O, N LOC100255961 protein EARLY FLOWERING 3
100255972 O, Y_N LOC100255972 adagio protein 3
100256592 O, N LOC100256592 protein EARLY FLOWERING 3
100256812 O, N LOC100256812 protein SUPPRESSOR OF PHYA-105 1
100256937 O, N LOC100256937 two-component response regulator-like PRR37
100257085 O, N LOC100257085 protein SPA1-RELATED 2
100257557 O, Y LOC100257557 WD repeat-containing protein RUP2-like
100258106 O, Y CHS3 chalcone synthase
100258790 O, N LOC100258790 two-component response regulator-like APRR1
100259500 S, C LOC100259500 casein kinase II subunit alpha-2
100261156 M, Y LOC100261156 chalcone synthase
100261472 C, N LOC100261472 transcription factor HY5-like
100261882 M, C LOC100261882 phytochrome B
100262569 O, N LOC100262569 putative casein kinase II subunit beta-4
100262691 O, Y LOC100262691 WD repeat-containing protein RUP2-like
100262741 M, C LOC100262741 casein kinase II subunit alpha
100263443 O, Y CHS chalcone synthase
100265568 O, N MYBA7 R2R3 MYB transcription factor
100266111 O, Y LOC100266111 casein kinase II subunit alpha-2
100266745 O, N LOC100266745 putative casein kinase II subunit beta-4
100267962 M, Y LOC100267962 chalcone synthase-like
100853219 O, N LOC100853219 two-component response regulator-like APRR5
100854415 M, Y LOC100854415 stilbene synthase 3
104879018 C, N LOC104879018 transcription factor HY5


List of genes in ppo


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
7454503 O, N LOC7454503 WD repeat-containing protein RUP2
7457173 O, N LOC7457173 transcription factor TCP21
7458626 O, N LOC7458626 two-component response regulator-like PRR37
7459020 C, N LOC7459020 transcription factor HY5
7459749 O, Y LOC7459749 adagio protein 3
7460519 O, Y LOC7460519 chalcone synthase 1
7460520 O, Y LOC7460520 chalcone synthase 1
7464491 O, N LOC7464491 two-component response regulator-like APRR5
7466313 O, C LOC7466313 chalcone synthase
7467800 O, P LOC7467800 protein GIGANTEA
7468530 O, N LOC7468530 E3 ubiquitin-protein ligase COP1
7469780 O, N LOC7469780 two-component response regulator-like PRR73
7470724 O, N LOC7470724 protein EARLY FLOWERING 3
7471583 C, N LOC7471583 transcription factor HY5
7472463 O, C LOC7472463 protein HEADING DATE 3A
7477210 O, N LOC7477210 transcription factor HY5-like
7478180 O, N LOC7478180 protein HEADING DATE 3B
7478808 O, N LOC7478808 protein LHY
7478869 O, N LOC7478869 transcription factor PIF3
7479329 O, N LOC7479329 protein SPA1-RELATED 2
7482219 M, N LOC7482219 phytochrome A
7482913 M, N LOC7482913 adagio protein 3
7483807 O, N LOC7483807 putative casein kinase II subunit beta-4
7484386 O, Y LOC7484386 WD repeat-containing protein RUP2
7485182 O, N LOC7485182 two-component response regulator-like APRR5
7485411 O, N LOC7485411 E3 ubiquitin-protein ligase COP1
7485825 M, C LOC7485825 phytochrome B
7485902 M, C LOC7485902 phytochrome B
7486597 O, C LOC7486597 cryptochrome-1
7486808 O, N LOC7486808 two-component response regulator-like APRR9
7486811 O, N LOC7486811 protein LHY
7486837 O, N LOC7486837 transcription factor PIF3
7486993 O, Y LOC7486993 chalcone synthase
7487745 O, N LOC7487745 two-component response regulator-like APRR5
7488958 O, N LOC7488958 adagio protein 1
7489763 O, Y LOC7489763 casein kinase II subunit alpha-2
7489764 O, C LOC7489764 casein kinase II subunit alpha
7492485 O, P LOC7492485 protein GIGANTEA
7492759 O, N LOC7492759 protein SUPPRESSOR OF PHYA-105 1
7493197 O, Y LOC7493197 chalcone synthase 1
7493198 O, Y LOC7493198 chalcone synthase 1
7493199 O, Y LOC7493199 chalcone synthase 1
7495156 O, C LOC7495156 cryptochrome-1
18096766 O, N LOC18096766 casein kinase II subunit beta-2
18096905 O, N LOC18096905 casein kinase II subunit beta-2
18097053 O, N LOC18097053 protein SPA1-RELATED 2
18097291 O, N LOC18097291 E3 ubiquitin-protein ligase COP1
18098446 O, N LOC18098446 transcription factor PIF3
18099506 O, N LOC18099506 chalcone synthase
18100482 O, N LOC18100482 adagio protein 1
18101120 C, C LOC18101120 casein kinase II subunit alpha-2
18101134 S, V LOC18101134 casein kinase II subunit alpha-2
18102473 O, N LOC18102473 cryptochrome-1
18103955 M, Y LOC18103955 chalcone synthase
18105101 O, N LOC18105101 putative casein kinase II subunit beta-4
18105787 O, N LOC18105787 two-component response regulator-like APRR1


List of genes in mtr


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
11405950 C, N LOC11405950 phytochrome A
11406493 O, N LOC11406493 transcription factor PIF3
11407003 O, Y LOC11407003 chalcone synthase 4
11410562 O, P LOC11410562 protein GIGANTEA
11410839 M, C LOC11410839 casein kinase II subunit alpha-2
11411483 O, C LOC11411483 chalcone synthase 1A
11412120 O, N LOC11412120 two-component response regulator-like APRR3
11417024 O, Y LOC11417024 adagio protein 3
11418796 O, Y LOC11418796 chalcone synthase 2
11418875 M, Y LOC11418875 cryptochrome-1
11419346 O, Y LOC11419346 chalcone synthase 5
11420025 C, Y LOC11420025 phytochrome B-2
11420334 O, Y LOC11420334 chalcone synthase 8
11420561 C, N LOC11420561 transcription factor HY5-like
11420610 O, Y LOC11420610 chalcone synthase 2
11420611 O, Y LOC11420611 chalcone synthase 2
11420758 O, N LOC11420758 E3 ubiquitin-protein ligase COP1
11421144 O, Y LOC11421144 chalcone synthase 2
11423615 O, N LOC11423615 transcription factor TCP7
11423879 O, N LOC11423879 transcription factor TCP7
11424172 O, Y LOC11424172 chalcone synthase 2
11426713 O, N LOC11426713 two-component response regulator-like APRR9
11427085 O, Y LOC11427085 protein HEADING DATE 3A
11427226 O, N LOC11427226 transcription factor PIF3
11428875 O, C LOC11428875 cryptochrome-1
11428910 O, Y LOC11428910 chalcone synthase 5
11430037 O, N LOC11430037 transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15
11430161 O, N LOC11430161 casein kinase II subunit beta-1
11431402 O, N LOC11431402 protein EARLY FLOWERING 3
11432385 O, N LOC11432385 protein LATE ELONGATED HYPOCOTYL
11434455 C, C LOC11434455 casein kinase II subunit alpha-2
11436702 O, Y LOC11436702 chalcone synthase 4
11437198 O, N LOC11437198 protein SPA1-RELATED 2
11437345 O, N LOC11437345 two-component response regulator-like APRR9
11438511 O, Y LOC11438511 chalcone synthase 1A
11438588 O, C LOC11438588 protein HEADING DATE 3A
11439469 O, Y LOC11439469 chalcone synthase 1B
11440049 O, Y LOC11440049 chalcone synthase
11442534 O, Y LOC11442534 chalcone synthase 4
11445386 O, N LOC11445386 adagio protein 1
25482012 O, N LOC25482012 ELF3-like protein 2
25484061 O, N LOC25484061 two-component response regulator-like APRR7
25484452 M, C LOC25484452 cryptochrome-1
25485043 O, Y LOC25485043 chalcone synthase 8
25488813 O, N LOC25488813 two-component response regulator-like APRR1
25489717 M, Y LOC25489717 stilbene synthase 4
25493524 M, C LOC25493524 casein kinase II subunit alpha
25493577 O, N LOC25493577 casein kinase II subunit beta-1
25493836 O, N LOC25493836 two-component response regulator-like APRR1
25494497 O, C LOC25494497 chalcone synthase 9
25494498 O, Y LOC25494498 chalcone synthase 9
25495876 O, Y LOC25495876 protein FLOWERING LOCUS T
25499670 O, Y LOC25499670 chalcone synthase 4
25500383 O, N LOC25500383 protein HEADING DATE 3B
25500611 O, N LOC25500611 two-component response regulator-like APRR5
25500742 O, N LOC25500742 protein SUPPRESSOR OF PHYA-105 1
120577917 O, Y LOC120577917 chalcone synthase 4


List of genes in tae


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
542789 O, Y LOC542789 casein kinase II subunit alpha-2
542970 O, N LOC542970 protein GIGANTEA
543104 O, Y LOC543104 chalcone synthase 2
100037528 O, Y LOC100037528 chalcone synthase 2
100127071 O, N LOC100127071 ELF3-like protein 2
100127072 O, Y LOC100127072 adagio-like protein 3
100136971 O, M LOC100136971 cryptochrome-1
100136972 M, N LOC100136972 cryptochrome-1
100137004 M, C LOC100137004 phytochrome B
100682447 O, Y LOC100682447 putative adagio-like protein 2
100682474 O, N LOC100682474 protein LHY
100873141 M, C LOC100873141 phytochrome A type 3
100873142 C, C LOC100873142 phytochrome A type 3
123040104 O, Y LOC123040104 chalcone synthase 2-like
123040799 O, Y LOC123040799 protein RICE FLOWERING LOCUS T 1-like
123042254 O, Y LOC123042254 protein FLOWERING LOCUS T-like
123042591 O, C LOC123042591 protein FLOWERING LOCUS T-like
123042593 O, Y LOC123042593 protein FLOWERING LOCUS T-like
123043495 C, N LOC123043495 two-component response regulator-like PRR37
123043497 C, N LOC123043497 two-component response regulator-like PRR37
123045091 O, Y LOC123045091 casein kinase II subunit alpha-2-like
123045624 O, Y LOC123045624 cryptochrome-1-like
123045836 O, Y LOC123045836 protein FLOWERING LOCUS T-like
123046191 M, N LOC123046191 casein kinase II subunit beta-1-like
123047221 O, Y LOC123047221 chalcone synthase 2-like
123047543 O, Y LOC123047543 chalcone synthase 2-like
123048273 O, Y LOC123048273 chalcone synthase 2-like
123049880 O, C LOC123049880 chalcone synthase 1-like
123050193 O, C LOC123050193 protein FLOWERING LOCUS T-like
123050502 O, Y LOC123050502 protein FLOWERING LOCUS T-like
123050504 O, C LOC123050504 protein FLOWERING LOCUS T-like
123051067 O, Y LOC123051067 chalcone synthase 2-like
123051070 O, Y LOC123051070 chalcone synthase 2-like
123051362 M, N LOC123051362 two-component response regulator-like PRR37
123052124 O, N LOC123052124 putative casein kinase II subunit beta-4
123052750 O, N LOC123052750 putative casein kinase II subunit beta-4
123052927 O, Y LOC123052927 casein kinase II subunit alpha-2
123053473 O, Y LOC123053473 cryptochrome-1-like
123053720 O, Y LOC123053720 protein FLOWERING LOCUS T-like
123054069 M, N LOC123054069 casein kinase II subunit beta-1-like
123055015 O, Y LOC123055015 chalcone synthase 2-like
123056082 O, Y LOC123056082 protein FLOWERING LOCUS T-like
123056583 O, C LOC123056583 protein FLOWERING LOCUS T-like
123060540 C, N LOC123060540 transcription factor HY5-like
123060690 M, C LOC123060690 protein HEADING DATE 3A-like
123064274 M, C LOC123064274 protein FLOWERING LOCUS T-like
123064276 O, Y LOC123064276 protein FLOWERING LOCUS T-like
123064277 O, Y LOC123064277 protein FLOWERING LOCUS T-like
123067123 O, C LOC123067123 protein FLOWERING LOCUS T-like
123068975 C, N LOC123068975 protein GIGANTEA
123069052 O, N LOC123069052 protein SUPPRESSOR OF PHYA-105 1-like
123069101 C, N LOC123069101 transcription factor HY5-like
123069202 O, Y LOC123069202 protein RICE FLOWERING LOCUS T 1-like
123071043 O, N LOC123071043 ELF3-like protein 2
123071871 O, M LOC123071871 chalcone synthase-like
123073525 O, C_M LOC123073525 chalcone synthase 2-like
123077506 O, N LOC123077506 protein GIGANTEA-like
123077618 C, N LOC123077618 transcription factor HY5-like
123077724 O, Y LOC123077724 protein RICE FLOWERING LOCUS T 1-like
123081092 O, Y LOC123081092 protein FLOWERING LOCUS T-like
123081094 O, Y LOC123081094 protein FLOWERING LOCUS T-like
123085018 M, Y LOC123085018 casein kinase II subunit alpha-2-like
123085525 O, N LOC123085525 two-component response regulator-like PRR73
123085598 O, Y LOC123085598 chalcone synthase 2-like
123086525 O, N LOC123086525 two-component response regulator-like APRR3
123091474 O, N LOC123091474 two-component response regulator-like APRR3
123092340 M, C LOC123092340 phytochrome B-like
123092509 O, N LOC123092509 two-component response regulator-like PRR73
123093046 M, C LOC123093046 casein kinase II subunit alpha-2-like
123093986 M, M LOC123093986 putative casein kinase II subunit beta-4
123094790 O, Y LOC123094790 adagio-like protein 3
123096439 O, N LOC123096439 two-component response regulator-like APRR3
123097663 M, C LOC123097663 phytochrome B-like
123097824 O, N LOC123097824 two-component response regulator-like PRR73
123098329 M, Y LOC123098329 casein kinase II subunit alpha-2-like
123099180 M, M LOC123099180 putative casein kinase II subunit beta-4
123104381 O, C LOC123104381 protein FLOWERING LOCUS T-like
123104431 M, Y LOC123104431 chalcone synthase 2-like
123104441 M, Y LOC123104441 chalcone synthase 2-like
123104448 M, Y LOC123104448 chalcone synthase 2-like
123104457 M, Y LOC123104457 chalcone synthase 2-like
123104466 M, Y LOC123104466 chalcone synthase 2-like
123104469 M, Y LOC123104469 chalcone synthase 2-like
123104502 M, Y LOC123104502 chalcone synthase 2-like
123104544 O, N LOC123104544 two-component response regulator-like PRR95
123105115 M, M LOC123105115 casein kinase II subunit alpha-2-like
123105124 C, C LOC123105124 casein kinase II subunit alpha-2-like
123106147 M, M LOC123106147 putative casein kinase II subunit beta-4
123106887 O, C LOC123106887 protein FLOWERING LOCUS T-like
123110986 O, N LOC123110986 transcription factor APG-like
123112663 O, Y LOC123112663 protein FLOWERING LOCUS T-like
123112819 O, N LOC123112819 two-component response regulator-like PRR95
123113407 M, M LOC123113407 casein kinase II subunit alpha-2-like
123113415 C, C LOC123113415 casein kinase II subunit alpha-2-like
123115998 O, C LOC123115998 protein FLOWERING LOCUS T-like
123122302 O, N LOC123122302 two-component response regulator-like PRR95
123122925 S, C LOC123122925 casein kinase II subunit alpha-2-like
123122932 M, C LOC123122932 casein kinase II subunit alpha-2-like
123123470 O, Y LOC123123470 chalcone synthase 2-like
123123471 O, Y LOC123123471 chalcone synthase 2-like
123124626 O, C LOC123124626 protein FLOWERING LOCUS T-like
123127245 O, N LOC123127245 transcription factor HY5-like
123127529 O, N LOC123127529 cryptochrome-1-like
123127635 O, Y LOC123127635 protein FLOWERING LOCUS T-like
123127724 M, N LOC123127724 cryptochrome-1-like
123127760 O, N LOC123127760 two-component response regulator-like PRR1
123128199 O, N LOC123128199 putative casein kinase II subunit beta-4
123128534 O, N LOC123128534 E3 ubiquitin-protein ligase COP1-like
123129152 O, N LOC123129152 transcription factor TCP21-like
123130067 C, C LOC123130067 WD repeat-containing protein RUP2-like
123130709 O, N LOC123130709 transcription factor TCP7-like
123132267 O, Y LOC123132267 putative adagio-like protein 2
123133345 C, C LOC123133345 WD repeat-containing protein RUP2-like
123134267 O, N LOC123134267 transcription factor TCP7-like
123134448 M, N LOC123134448 transcription factor TCP7-like
123136934 O, N LOC123136934 transcription factor HY5-like
123137395 O, Y LOC123137395 protein FLOWERING LOCUS T-like
123137489 O, N LOC123137489 two-component response regulator-like PRR1
123138400 O, N LOC123138400 E3 ubiquitin-protein ligase COP1-like
123140068 O, N LOC123140068 transcription factor TCP21-like
123141504 O, Y LOC123141504 protein FLOWERING LOCUS T-like
123141558 O, N LOC123141558 transcription factor TCP7-like
123143163 C, C LOC123143163 WD repeat-containing protein RUP2-like
123143828 O, Y LOC123143828 putative adagio-like protein 2
123144357 O, N LOC123144357 transcription factor HY5-like
123144624 O, N LOC123144624 cryptochrome-1-like
123144843 O, N LOC123144843 two-component response regulator-like PRR1
123144872 M, N LOC123144872 cryptochrome-1-like
123145654 O, N LOC123145654 E3 ubiquitin-protein ligase COP1-like
123146326 O, N LOC123146326 transcription factor TCP21-like
123147271 O, N LOC123147271 protein LHY-like
123147298 O, N LOC123147298 protein SUPPRESSOR OF PHYA-105 1-like
123148150 O, N LOC123148150 transcription factor HY5-like
123148788 O, Y LOC123148788 adagio-like protein 1
123157050 O, K LOC123157050 chalcone synthase 2-like
123159113 O, Y LOC123159113 chalcone synthase 2-like
123159780 O, Y LOC123159780 chalcone synthase 2-like
123162655 O, N LOC123162655 transcription factor HY5-like
123163641 O, Y LOC123163641 chalcone synthase 2-like
123163826 O, N LOC123163826 transcription factor HY5-like
123167076 O, N LOC123167076 protein LHY-like
123168584 O, Y LOC123168584 adagio-like protein 1
123172147 O, N LOC123172147 putative casein kinase II subunit beta-4
123179972 M, Y LOC123179972 chalcone synthase 2-like
123179973 M, Y LOC123179973 chalcone synthase 2-like
123180361 O, N LOC123180361 transcription factor APG-like
123181651 O, N LOC123181651 putative casein kinase II subunit beta-4
123183200 O, N LOC123183200 protein SUPPRESSOR OF PHYA-105 1-like
123183422 O, N LOC123183422 ELF3-like protein 2
123184282 O, Y LOC123184282 chalcone synthase 2-like
123186222 O, C LOC123186222 protein FLOWERING LOCUS T-like
123186466 O, C LOC123186466 protein FLOWERING LOCUS T-like
123186467 O, C LOC123186467 protein FLOWERING LOCUS T-like
123186969 M, Y LOC123186969 chalcone synthase 2
123186993 O, Y LOC123186993 chalcone synthase 2-like
123187050 O, Y LOC123187050 chalcone synthase 2-like
123188649 C, N LOC123188649 putative casein kinase II subunit beta-4
123189391 O, Y LOC123189391 cryptochrome-1-like
123189598 O, Y LOC123189598 protein FLOWERING LOCUS T-like
123189958 M, N LOC123189958 casein kinase II subunit beta-1-like
123190549 O, N LOC123190549 transcription factor APG-like
123190869 O, Y LOC123190869 chalcone synthase 2-like
123192008 M, C LOC123192008 protein FLOWERING LOCUS T-like


The preparation time of this page was 0.7 [sec].