KEGG 04712 Circadian rhythm - plant

43  ath genes in this database.
105  gma genes in this database.
47  sly genes in this database.
47  osa genes in this database.
74  zma genes in this database.
74  bra genes in this database.
44  vvi genes in this database.
60  ppo genes in this database.
62  mtr genes in this database.
179  tae genes in this database.
64  hvu genes in this database.
130  ghi genes in this database.
144  bna genes in this database.
5  cre genes in this database.
54  sbi genes in this database.
52  sot genes in this database.
44  cit genes in this database.
44  bdi genes in this database.
92  nta genes in this database.

List of genes in ath


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
816394 C, N PHYB phytochrome B
816837 C, C AT2G23070 Protein kinase superfamily protein
816838 O, N CKA3 Protein kinase superfamily protein
817134 O, N ELF3 hydroxyproline-rich glycoprotein family protein
817857 O, N COP1 Transducin/WD40 repeat-like superfamily protein
819076 O, N CKB4 casein kinase II beta subunit 4
819242 O, N SPA1 SPA (suppressor of phyA-105) protein family
819292 O, N PRR9 pseudo-response regulator 9
819296 O, N CCA1 circadian clock associated 1
820767 M, N SPA3 SPA1-related 3
821027 O, N HYH HY5-homolog
821298 O, N COL2 CONSTANS-like 2
824162 S, V CKA2 casein kinase II, alpha chain 2
825196 O, N CKB3 casein kinase II beta chain 3
826470 O, C CRY1 cryptochrome 1
826712 O, N SPA2 SPA1-related 2
827484 O, N CKB2 casein kinase II beta chain 2
827785 O, C TSF PEBP (phosphatidylethanolamine-binding protein) family protein
830730 O, N TCP11 TCP family transcription factor
830996 C, N HY5 Basic-leucine zipper (bZIP) transcription factor family protein
831241 O, Y TT4 Chalcone and stilbene synthase family protein
831441 O, N CO B-box type zinc finger protein with CCT domain-containing protein
831442 O, N COL1 CONSTANS-like 1
831793 O, N PRR7 pseudo-response regulator 7
832392 O, N AT5G23280 TCP family transcription factor
832438 O, C RUP2 Transducin/WD40 repeat-like superfamily protein
832518 O, N PRR5 two-component response regulator-like protein
834754 O, C CKB1 casein kinase II beta chain 1
835301 C, Y RUP1 Transducin/WD40 repeat-like superfamily protein
835842 O, N ZTL Galactose oxidase/kelch repeat superfamily protein
836132 O, N PRR3 pseudo-response regulator 3
836259 O, N TOC1 CCT motif -containing response regulator protein
836364 O, N CDF1 cycling DOF factor 1
836873 S, Y CKA1 casein kinase alpha 1
837479 O, N PIF3 phytochrome interacting factor 3
837483 O, Y PHYA phytochrome A
838883 O, P GI gigantea protein (GI)
839341 O, N LHY Homeodomain-like superfamily protein
839529 O, Y CRY2 cryptochrome 2
841743 M, C SPA4 SPA1-related 4
842120 O, N PAP1 production of anthocyanin pigment 1
842859 O, Y FT PEBP (phosphatidylethanolamine-binding protein) family protein
843133 O, N FKF1 flavin-binding, kelch repeat, f box 1


List of genes in gma


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
547810 M, C_M PHYA phytochrome A
732575 O, Y CHS1 chalcone synthase 1
778086 O, N MYB114 MYB transcription factor MYB114
778143 C, N BZIP69 bZIP transcription factor bZIP69
780540 O, N LCL3 LHY1/CCA1-like protein
100101859 O, N LCL4 LHY1/CCA1-like protein
100170701 O, Y CHS8 chalcone synthase
100233233 O, N CRY1a cryptochrome 1
100233234 O, C LOC100233234 cryptochrome 2
100271888 O, N LCL1 late elongated hypocotyl and circadian clock associated-1-like protein 1
100271889 O, N TOC1 timing of CAB expression 1
100301885 O, C COL2a CONSTANS-like 2a
100301886 O, Y COL2B zinc finger protein CONSTANS-LIKE 2
100301887 O, N ZTL1 PAS protein ZEITLUPE 1
100301888 O, N ZTL2 clock-associated PAS protein ZEITLUPE 2
100301889 O, Y FKF1 circadian clock-associated FKF1
100775264 O, Y CHS13 chalcone synthase 13
100776388 M, C LOC100776388 casein kinase II subunit alpha
100776980 O, N LOC100776980 protein SPA1-RELATED 2
100777119 O, N LOC100777119 two-component response regulator-like PRR95
100778303 O, N LOC100778303 protein SPA1-RELATED 2
100778957 O, N LOC100778957 transcription factor MYB1
100779044 O, P GIGANTEA protein GIGANTEA
100779346 O, N LOC100779346 two-component response regulator-like APRR5
100779649 O, Y CHS4A chalcone synthase 4a
100780095 O, N LOC100780095 putative casein kinase II subunit beta
100781509 O, Y FT3B protein FLOWERING LOCUS T-like
100782271 C, N LOC100782271 transcription factor TCP7
100782635 O, C LOC100782635 zinc finger protein CONSTANS-LIKE 2
100782897 O, Y CHS7 chalcone synthase 7
100784300 O, N LOC100784300 protein SPA1-RELATED 2
100784315 O, N LOC100784315 putative casein kinase II subunit beta
100784383 O, N LOC100784383 two-component response regulator-like APRR9
100784724 O, N PIF3 bHLH transcription factor PIF3
100784848 O, N LOC100784848 putative casein kinase II subunit beta
100785554 O, Y CHS11 chalcone synthase 11
100785796 O, N PRR3A two-component response regulator PRR3A
100786264 O, N LOC100786264 transcription factor TCP7
100786522 O, N LOC100786522 two-component response regulator-like APRR1
100786551 O, E LOC100786551 cryptochrome-1-like
100787673 O, Y FT2B protein FLOWERING LOCUS T-like
100788038 O, N LOC100788038 protein EARLY FLOWERING 3
100788048 O, Y CHS10 chalcone synthase 10
100788171 O, N LOC100788171 E3 ubiquitin-protein ligase COP1
100789075 O, Y CHS3C chalcone synthase 3
100789357 O, N LOC100789357 putative casein kinase II subunit beta
100790763 M, C E4 phytochrome A
100790997 O, Y CHS9 chalcone synthase 9
100791098 C, C PHYA3 phytochrome A-2-like
100791524 O, Y CHS3 chalcone synthase 3
100791698 O, N LOC100791698 two-component response regulator-like APRR9
100792581 O, Y CHS4B chalcone synthase 4b
100793561 O, N ELF3A protein EARLY FLOWERING 3a
100793573 O, N LOC100793573 putative casein kinase II subunit beta-4
100794865 C, C LOC100794865 phytochrome B-2-like
100794974 O, N LOC100794974 transcription factor PIF3
100795254 O, N LOC100795254 transcription factor TCP7
100796933 O, N LOC100796933 two-component response regulator-like APRR7
100796994 C, Y FT5A protein FLOWERING LOCUS T
100797839 O, C LOC100797839 cryptochrome-1-like
100799005 O, N LOC100799005 transcription factor TCP7
100799267 O, N LOC100799267 protein SUPPRESSOR OF PHYA-105 1
100799304 O, N LOC100799304 putative casein kinase II subunit beta
100799728 O, N LOC100799728 two-component response regulator-like APRR1
100799831 C, C PHYB phytochrome B-like
100800443 O, N LOC100800443 transcription factor TCP7
100800578 O, P E2 protein GIGANTEA
100802144 O, N LOC100802144 protein SUPPRESSOR OF PHYA-105 1
100802674 O, N LOC100802674 two-component response regulator-like PRR95
100802828 O, N ZTL adagio protein 1
100803909 O, Y FT3A protein FLOWERING LOCUS T-like
100804665 O, N LOC100804665 transcription factor PIF3
100805051 O, C COL13 zinc finger protein CONSTANS-LIKE 2-like
100805523 O, N LOC100805523 adagio protein 1
100806454 O, N LOC100806454 two-component response regulator-like APRR7
100808334 O, C FT6 protein FLOWERING LOCUS T-like
100808627 O, C LOC100808627 cryptochrome-2-like
100809433 O, Y CHS6 chalcone synthase 6
100809490 O, N LOC100809490 two-component response regulator-like PRR95
100810748 O, N LOC100810748 casein kinase II subunit alpha-2
100811457 C, N LOC100811457 protein SPA1-RELATED 3
100811759 O, Y CRY2B cryptochrome-2b
100812253 O, S LOC100812253 adagio protein 3
100813452 C, N LOC100813452 protein SPA1-RELATED 2
100813528 O, N LOC100813528 casein kinase II subunit alpha-2
100813745 O, N LOC100813745 E3 ubiquitin-protein ligase COP1
100813917 O, N LOC100813917 two-component response regulator-like APRR1
100814951 O, Y FT2A protein FLOWERING LOCUS T
100815428 O, C LOC100815428 cryptochrome-1-like
100817795 M, M LOC100817795 casein kinase II subunit alpha-4, chloroplastic
100818279 O, N ELF3B protein EARLY FLOWERING 3b
100818543 O, N LOC100818543 transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15
100819679 M, Y LOC100819679 casein kinase II subunit alpha-2
100820110 O, N LOC100820110 ELF3-like protein 2
100820151 O, N LOC100820151 transcription factor PIF3
100820471 S, C LOC100820471 casein kinase II subunit alpha-1-like
102659557 O, N LOC102659557 transcription factor PIF3
102663074 O, Y_N LOC102663074 chalcone synthase 3
102663657 O, N LOC102663657 ELF3-like protein 2
106794283 O, Y CHS3B chalcone synthase 3
106795466 O, C FT2C protein FLOWERING LOCUS T-like
106799718 O, Y CHS5 chalcone synthase 5
114827817 O, Y CHS2 chalcone synthase 2
121175284 O, Y LOC121175284 chalcone synthase 1
121175285 O, Y LOC121175285 chalcone synthase 3


List of genes in sly


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
543547 O, N COP1 putative E3 ubiquitin-protein ligase COP1
543596 O, N CRY2 cryptochrome 2
543688 M, C Cry1b cryptochrome 1b
543733 C, N HY5 THY5 protein
544176 M, N phyA Phytochrome A
544219 O, C CRY1a cryptochrome 1
778253 O, N CO1 CONSTANS 1
778294 O, Y CHS1 chalcone synthase
778295 M, Y CHS2 chalcone synthase
100736457 O, N TCP14 TCP transcription factor 14
100736520 O, N TCP15 TCP transcription factor 15
101244750 O, Y LOC101244750 casein kinase II subunit alpha-2
101245619 O, N LOC101245619 protein EARLY FLOWERING 3-like
101245655 O, N LOC101245655 putative casein kinase II subunit beta-4
101246029 O, Y SFT protein single flower truss
101246108 C, C LOC101246108 casein kinase II subunit alpha
101246833 O, N LOC101246833 casein kinase II subunit beta-3
101249027 O, N LOC101249027 protein SUPPRESSOR OF PHYA-105 1-like
101249224 O, N LOC101249224 two-component response regulator-like PRR73
101249698 O, N LOC101249698 E3 ubiquitin-protein ligase COP1-like
101249856 O, N LOC101249856 putative casein kinase II subunit beta-4
101249977 O, Y LOC101249977 protein FLOWERING LOCUS T-like
101249991 C, N LOC101249991 protein SPA1-RELATED 4-like
101250283 O, N LOC101250283 two-component response regulator-like APRR5
101254785 O, C LOC101254785 two-component response regulator-like PRR37
101254900 O, Y SP5G protein SELF PRUNING 5G
101255788 O, P LOC101255788 protein GIGANTEA
101256107 O, N LOC101256107 protein SPA1-RELATED 4-like
101256338 O, Y LOC101256338 casein kinase II subunit alpha-1
101256908 O, N LOC101256908 adagio protein 3
101257119 O, N LOC101257119 putative casein kinase II subunit beta-4
101258346 O, N LOC101258346 protein GIGANTEA-like
101259163 O, N LOC101259163 two-component response regulator-like APRR1
101259391 O, Y LOC101259391 COP1-like protein
101259425 O, N LOC101259425 two-component response regulator-like APRR1
101261662 O, N LOC101261662 protein LATE ELONGATED HYPOCOTYL
101262617 O, Y SP6A protein SELF PRUNING 6A
101262847 M, N PHYB1 phytochrome B1
101262866 O, N LOC101262866 two-component response regulator-like APRR5
101262932 O, N LOC101262932 adagio protein 1
101263032 O, Y LOC101263032 chalcone synthase J
101263834 O, N LOC101263834 protein SPA1-RELATED 2
101265040 O, N LOC101265040 ELF3-like protein 2
101266107 O, Y LOC101266107 chalcone synthase J
101267355 O, N LOC101267355 transcription factor PIF3
101267430 O, N LOC101267430 protein EARLY FLOWERING 3
101268174 O, N LOC101268174 protein EARLY FLOWERING 3


List of genes in osa


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
4324585 C, C LOC4324585 protein FLOWERING LOCUS T 1
4324727 O, N LOC4324727 protein SPA1-RELATED 4
4325329 O, N LOC4325329 protein GIGANTEA-like
4327916 O, N LOC4327916 transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15-like
4327931 O, N LOC4327931 ELF3-like protein 2
4328313 O, N LOC4328313 putative adagio-like protein 2
4328662 C, N LOC4328662 transcription factor HY5
4329738 O, Y LOC4329738 cryptochrome-1
4330000 O, N LOC4330000 two-component response regulator-like PRR1
4330080 M, C LOC4330080 transcription factor TCP7
4330868 O, N LOC4330868 E3 ubiquitin-protein ligase COP1
4332003 O, Y LOC4332003 casein kinase II subunit alpha-2-like
4332464 O, N LOC4332464 two-component response regulator-like PRR73
4332623 M, C LOC4332623 phytochrome B-like
4333930 M, C LOC4333930 phytochrome A-like
4334206 M, C LOC4334206 casein kinase II subunit alpha-2-like
4336008 O, Y LOC4336008 cryptochrome-1
4336228 O, Y LOC4336228 protein FLOWERING LOCUS T
4336452 M, C LOC4336452 transcription factor TCP21
4337752 O, N LOC4337752 transcription factor APG-like
4339663 O, N LOC4339663 protein SUPPRESSOR OF PHYA-105 1
4340087 O, N LOC4340087 protein HEADING DATE 3B-like
4340184 O, C LOC4340184 protein RICE FLOWERING LOCUS T 1-like
4340185 O, C LOC4340185 protein HEADING DATE 3A-like
4341272 O, Y LOC4341272 protein FLOWERING LOCUS T
4341923 O, Y LOC4341923 adagio-like protein 1
4342248 O, N LOC4342248 casein kinase II subunit alpha-2-like
4342725 O, Y LOC4342725 chalcone synthase 2
4343287 O, N LOC4343287 putative casein kinase II subunit beta-4
4344399 O, N LOC4344399 two-component response regulator-like PRR37
4344703 O, N LOC4344703 protein LHY
4347674 O, N LOC4347674 two-component response regulator-like PRR95
4349414 O, N LOC4349414 putative casein kinase II subunit beta-4
4349831 O, N LOC4349831 two-component response regulator-like PRR95
4350636 O, Y LOC4350636 chalcone synthase 1-like
4350698 O, Y_N LOC4350698 adagio-like protein 3
9268282 O, Y LOC9268282 protein FLOWERING LOCUS T
9268301 O, N LOC9268301 transcription factor HY5
9270575 M, N LOC9270575 cryptochrome-1
9271430 O, Y LOC9271430 protein FLOWERING LOCUS T 1
9272106 O, N LOC9272106 transcription factor TCP7
107276111 O, Y LOC107276111 protein RICE FLOWERING LOCUS T 1-like
107276195 O, Y LOC107276195 protein VERNALIZATION 3
107276210 O, Y LOC107276210 protein TWIN SISTER of FT
107277483 C, C LOC107277483 transcription factor TCP21
107279948 O, Y LOC107279948 WD repeat-containing protein RUP2
107280190 O, Y LOC107280190 protein VERNALIZATION 3-like


List of genes in zma


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
541823 O, N LOC541823 CK2 regulatory subunit B1
541824 O, N LOC541824 casein kinase II subunit beta-4
541825 O, Y LOC541825 protein kinase CK2 catalytic subunit CK2 alpha-3
542460 S, C LOC542460 CK2 protein kinase alpha 2
542628 O, N LOC542628 uncharacterized LOC542628
542637 O, Y LOC542637 Casein kinase II subunit alpha
100127523 O, Y ZCN14 ZCN14 protein
100127524 O, Y LOC100127524 uncharacterized LOC100127524
100127525 O, Y LOC100127525 ZCN16 protein
100127526 O, Y LOC100127526 ZCN17 protein
100127527 O, Y LOC100127527 ZCN18 protein
100127528 O, Y LOC100127528 ZCN19 protein
100127529 O, Y LOC100127529 protein TWIN SISTER of FT
100127530 O, Y LOC100127530 uncharacterized LOC100127530
100127539 O, C LOC100127539 uncharacterized LOC100127539
100147733 O, N LOC100147733 uncharacterized LOC100147733
100192868 O, N LOC100192868 uncharacterized LOC100192868
100192956 C, N LOC100192956 uncharacterized LOC100192956
100193188 M, C LOC100193188 uncharacterized LOC100193188
100194126 M, C LOC100194126 cryptochrome2
100272683 O, N LOC100272683 uncharacterized LOC100272683
100272803 O, N LOC100272803 uncharacterized LOC100272803
100273598 O, N LOC100273598 Two-component response regulator-like APRR9
100274243 O, N LOC100274243 uncharacterized LOC100274243
100274415 O, Y LOC100274415 chalcone synthase
100277533 O, C LOC100277533 uncharacterized LOC100277533
100278144 C, N LOC100278144 uncharacterized LOC100278144
100279342 O, N LOC100279342 E3 ubiquitin-protein ligase COP1
100279726 O, Y LOC100279726 Adagio protein 3
100279991 M, C LOC100279991 uncharacterized LOC100279991
100280240 O, N LOC100280240 PseuodARR-B transcription factor
100281091 O, N LOC100281091 LHY protein
100281433 O, N LOC100281433 uncharacterized LOC100281433
100282642 O, Y LOC100282642 chalcone synthase
100283448 O, N LOC100283448 casein kinase II subunit beta-4
100284201 O, N LOC100284201 uncharacterized LOC100284201
100285170 O, N LOC100285170 two-component response regulator-like PRR95
100286122 O, N LOC100286122 ubiquitin ligase protein COP1
100286123 C, N LOC100286123 uncharacterized LOC100286123
100381775 O, N LOC100381775 Two-component response regulator-like APRR9
100381811 C, C LOC100381811 phytochromeB2
100382453 O, N LOC100382453 uncharacterized LOC100382453
100383277 O, N LOC100383277 uncharacterized LOC100383277
100383534 O, N LOC100383534 uncharacterized LOC100383534
100383702 C, C LOC100383702 Phytochrome B
100383828 , LOC100383828 bZIP-type transcription factor pseudogene
100384276 O, N LOC100384276 Protein SUPPRESSOR OF PHYA-105 1
100384475 O, Y LOC100384475 uncharacterized LOC100384475
100502533 O, Y LOC100502533 cryptochrome 2
103625865 S, Y LOC103625865 casein kinase II subunit alpha-2
103626364 O, N LOC103626364 adagio-like protein 1
103626626 O, N LOC103626626 putative adagio-like protein 2
103627461 O, N LOC103627461 transcription factor TCP21
103628561 O, Y LOC103628561 protein FLOWERING LOCUS T
103629610 O, N LOC103629610 adagio-like protein 1
103629618 O, Y LOC103629618 casein kinase II subunit alpha-like
103630791 O, N LOC103630791 ELF3-like protein 2
103633010 O, Y LOC103633010 protein FLOWERING LOCUS T
103633607 O, N LOC103633607 two-component response regulator-like PRR37
103633683 M, C LOC103633683 two-component response regulator-like PRR1
103634871 C, N LOC103634871 transcription factor HY5
103635349 O, N LOC103635349 protein SUPPRESSOR OF PHYA-105 1
103636244 O, N LOC103636244 protein SPA1-RELATED 4
103638645 O, N LOC103638645 transcription factor HY5
103641361 C, N LOC103641361 transcription factor APG
103641861 O, C LOC103641861 transcription factor PCF1
103643916 M, C LOC103643916 phytochrome A-like
103644048 M, C LOC103644048 uncharacterized LOC103644048
103647963 O, N LOC103647963 two-component response regulator-like PRR37
103648678 O, N LOC103648678 two-component response regulator-like PRR1
103651094 O, N LOC103651094 two-component response regulator-like PRR1
103651250 O, N LOC103651250 protein SPA1-RELATED 4
109942013 O, Y LOC109942013 casein kinase II subunit alpha-4, chloroplastic
115101004 M, C LOC115101004 uncharacterized LOC115101004


List of genes in bra


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
103249154 O, N LOC103249154 zinc finger protein CONSTANS-LIKE 2
103249166 O, P LOC103249166 protein GIGANTEA
103249168 O, N LOC103249168 protein EARLY FLOWERING 3
103827764 S, Y LOC103827764 casein kinase II subunit alpha-2
103827864 O, N LOC103827864 casein kinase II subunit beta-1
103828356 O, N LOC103828356 adagio protein 2
103830251 O, N LOC103830251 casein kinase II subunit beta-3
103831057 O, Y LOC103831057 protein TWIN SISTER of FT
103833904 O, N LOC103833904 protein SPA1-RELATED 2
103836576 O, C LOC103836576 cryptochrome-2
103836661 O, N LOC103836661 protein LHY
103836793 O, Y LOC103836793 chalcone synthase 3
103837062 O, N LOC103837062 two-component response regulator-like APRR5
103837378 O, N LOC103837378 two-component response regulator-like APRR1
103838805 O, C CRY1 cryptochrome circadian clock 1
103839184 M, N LOC103839184 transcription factor HY5-like
103840863 O, N LOC103840863 protein SPA1-RELATED 3
103840918 S, C LOC103840918 casein kinase II subunit alpha-2
103841878 O, N LOC103841878 casein kinase II subunit beta-3
103842445 C, C LOC103842445 casein kinase II subunit alpha-4, chloroplastic
103843346 C, C LOC103843346 phytochrome A
103843349 O, N LOC103843349 transcription factor PIF3
103844260 M, M LOC103844260 cryptochrome-2
103844616 O, N LOC103844616 protein LHY
103845423 O, N LOC103845423 two-component response regulator-like APRR3
103846378 O, N LOC103846378 zinc finger protein CONSTANS-LIKE 1
103846381 O, N LOC103846381 zinc finger protein CONSTANS
103846527 O, Y LOC103846527 chalcone synthase 1
103846737 C, N HY5 transcription factor HY5
103847150 O, N LOC103847150 transcription factor TCP21
103847424 O, N LOC103847424 two-component response regulator-like APRR7
103850461 O, N LOC103850461 two-component response regulator-like APRR7
103850694 O, N LOC103850694 transcription factor TCP21
103850763 C, N LOC103850763 transcription factor HY5
103850907 O, Y LOC103850907 chalcone synthase 3
103851008 M, C LOC103851008 zinc finger protein CONSTANS-LIKE 1
103852241 O, C LOC103852241 protein FLOWERING LOCUS T
103853778 O, N LOC103853778 casein kinase II subunit beta-1
103854548 O, Y LOC103854548 chalcone synthase
103854859 O, N LOC103854859 two-component response regulator-like APRR5
103854905 O, N LOC103854905 transcription factor TCP7
103855006 C, N LOC103855006 cyclic dof factor 1
103855586 O, N LOC103855586 casein kinase II subunit beta-2
103855775 O, N LOC103855775 transcription factor TCP21
103856040 O, Y LOC103856040 chalcone synthase 3
103857138 O, Y LOC103857138 WD repeat-containing protein RUP1
103858139 O, N LOC103858139 putative casein kinase II subunit beta-4
103858211 O, N LOC103858211 protein SUPPRESSOR OF PHYA-105 1
103859717 M, C LOC103859717 transcription factor HY5-like
103860589 O, N LOC103860589 two-component response regulator-like APRR1
103860926 O, N LOC103860926 casein kinase II subunit beta-2
103864062 O, N LOC103864062 casein kinase II subunit beta-2
103864119 O, Y LOC103864119 casein kinase II subunit beta-2
103864454 C, C LOC103864454 casein kinase II subunit alpha-4, chloroplastic
103864705 O, N LOC103864705 protein EARLY FLOWERING 3
103865427 O, M LOC103865427 transcription factor TCP7
103865631 O, N LOC103865631 WD repeat-containing protein RUP2
103866306 O, N LOC103866306 two-component response regulator-like APRR9
103866427 O, N CCA1 cataract, congenital, cerulean type, 1
103866432 O, N LOC103866432 two-component response regulator-like APRR9
103866477 O, N LOC103866477 protein SUPPRESSOR OF PHYA-105 1
103866823 O, N LOC103866823 putative casein kinase II subunit beta-4
103867588 O, N LOC103867588 E3 ubiquitin-protein ligase COP1
103868459 O, C LOC103868459 protein SPA1-RELATED 4
103869673 O, N LOC103869673 transcription factor HY5-like
103869720 O, N LOC103869720 phytochrome B
103869936 C, N LOC103869936 protein SPA1-RELATED 3
103871725 M, N LOC103871725 transcription factor PIF3
103871728 M, C LOC103871728 phytochrome A
103874198 O, N LOC103874198 transcription factor TCP7
103874318 O, N LOC103874318 two-component response regulator-like APRR5
103874677 O, N LOC103874677 cyclic dof factor 1
117130946 O, N LOC117130946 transcription factor TCP21-like
117131903 O, N LOC117131903 transcription factor TCP21


List of genes in vvi


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
100232843 O, Y LOC100232843 chalcone synthase
100232994 O, Y FT flowering locus T
100240824 M, N PHYA phytochrome A
100244508 O, N LOC100244508 adagio protein 1
100246063 O, N LOC100246063 E3 ubiquitin-protein ligase COP1
100246836 O, N LOC100246836 two-component response regulator-like PRR37
100247664 O, N LOC100247664 cryptochrome-1
100247781 O, N LOC100247781 transcription factor PIF3
100248114 O, N LOC100248114 zinc finger protein CONSTANS-LIKE 2
100248310 O, N LOC100248310 E3 ubiquitin-protein ligase COP1
100248612 M, Y LOC100248612 chalcone synthase
100249144 O, N LOC100249144 adagio protein 1
100250535 M, N LOC100250535 protein LATE ELONGATED HYPOCOTYL
100253181 C, C LOC100253181 transcription factor TCP7
100253874 O, N LOC100253874 transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15
100253885 O, N LOC100253885 two-component response regulator-like APRR9
100253988 C, N LOC100253988 protein SPA1-RELATED 4
100254022 O, C LOC100254022 cryptochrome-1
100254197 O, P LOC100254197 protein GIGANTEA
100255961 O, N LOC100255961 protein EARLY FLOWERING 3
100255972 O, Y_N LOC100255972 adagio protein 3
100256592 O, N LOC100256592 protein EARLY FLOWERING 3
100256812 O, N LOC100256812 protein SUPPRESSOR OF PHYA-105 1
100256937 O, N LOC100256937 two-component response regulator-like PRR37
100257085 O, N LOC100257085 protein SPA1-RELATED 2
100257557 O, Y LOC100257557 WD repeat-containing protein RUP2
100258106 O, Y CHS3 chalcone synthase
100258790 O, N LOC100258790 two-component response regulator-like APRR1
100258898 C, N LOC100258898 protein SPA1-RELATED 3
100259500 S, C LOC100259500 casein kinase II subunit alpha-2
100261156 M, Y LOC100261156 chalcone synthase
100261472 C, N LOC100261472 transcription factor HY5-like
100261882 M, C LOC100261882 phytochrome B
100262569 O, N LOC100262569 putative casein kinase II subunit beta-4
100262691 O, Y LOC100262691 WD repeat-containing protein RUP2
100262741 M, C LOC100262741 casein kinase II subunit alpha
100263443 O, Y LOC100263443 chalcone synthase
100265568 O, N MYBA7 R2R3 MYB transcription factor
100266111 O, Y LOC100266111 casein kinase II subunit alpha-2
100266745 O, N LOC100266745 putative casein kinase II subunit beta-4
100267962 M, Y LOC100267962 chalcone synthase
100853219 O, N LOC100853219 two-component response regulator-like APRR5
100854415 M, Y LOC100854415 stilbene synthase 3
104879018 C, N LOC104879018 transcription factor HY5


List of genes in ppo


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
7454503 O, N LOC7454503 WD repeat-containing protein RUP2
7457173 O, N LOC7457173 transcription factor TCP21
7458626 O, N LOC7458626 two-component response regulator-like PRR37
7459020 C, N LOC7459020 transcription factor HY5
7459749 O, Y LOC7459749 adagio protein 3
7460519 O, Y LOC7460519 chalcone synthase 1
7460520 O, Y LOC7460520 chalcone synthase 1
7464491 O, N LOC7464491 two-component response regulator-like APRR5
7466313 O, C LOC7466313 chalcone synthase
7467800 O, P LOC7467800 protein GIGANTEA
7468389 O, C LOC7468389 zinc finger protein CONSTANS-LIKE 2
7468530 O, N LOC7468530 E3 ubiquitin-protein ligase COP1
7469780 O, N LOC7469780 two-component response regulator-like PRR73
7470724 O, N LOC7470724 protein EARLY FLOWERING 3
7471583 C, N LOC7471583 transcription factor HY5
7472463 O, C LOC7472463 protein HEADING DATE 3A
7474393 O, C LOC7474393 protein HEADING DATE 3A
7477210 O, N LOC7477210 transcription factor HY5-like
7478180 O, N LOC7478180 protein HEADING DATE 3B
7478808 O, N LOC7478808 protein LATE ELONGATED HYPOCOTYL
7478869 O, N LOC7478869 transcription factor PIF3
7479329 O, N LOC7479329 protein SPA1-RELATED 2
7482219 M, N LOC7482219 phytochrome A
7482913 O, N LOC7482913 adagio protein 3
7483807 O, N LOC7483807 putative casein kinase II subunit beta-4
7484386 O, Y LOC7484386 WD repeat-containing protein RUP2
7485182 O, N LOC7485182 two-component response regulator-like APRR5
7485411 O, N LOC7485411 E3 ubiquitin-protein ligase COP1
7485825 M, C LOC7485825 phytochrome B
7485902 M, C LOC7485902 phytochrome B
7486597 O, C LOC7486597 cryptochrome-1
7486808 O, N LOC7486808 two-component response regulator-like APRR9
7486811 O, N LOC7486811 protein LATE ELONGATED HYPOCOTYL
7486837 O, N LOC7486837 transcription factor PIF3
7486993 O, Y LOC7486993 chalcone synthase
7487745 O, N LOC7487745 two-component response regulator-like APRR5
7488958 O, N LOC7488958 adagio protein 1
7489763 O, Y LOC7489763 casein kinase II subunit alpha-2
7489764 O, C LOC7489764 casein kinase II subunit alpha
7492485 O, P LOC7492485 protein GIGANTEA
7492759 O, N LOC7492759 protein SUPPRESSOR OF PHYA-105 1
7493197 O, Y LOC7493197 chalcone synthase 1
7493199 O, Y LOC7493199 chalcone synthase 1
7495156 O, C LOC7495156 cryptochrome-1
18095578 C, N LOC18095578 protein SPA1-RELATED 3
18096766 O, N LOC18096766 casein kinase II subunit beta-2
18096905 O, N LOC18096905 casein kinase II subunit beta-2
18097053 O, N LOC18097053 protein SPA1-RELATED 2
18097291 O, N LOC18097291 E3 ubiquitin-protein ligase COP1
18098446 O, N LOC18098446 transcription factor PIF3
18099506 O, N LOC18099506 chalcone synthase
18100482 O, N LOC18100482 adagio protein 1
18101120 M, C LOC18101120 casein kinase II subunit alpha-2
18101134 S, V LOC18101134 casein kinase II subunit alpha-2
18102473 O, N LOC18102473 cryptochrome-1
18103955 M, Y LOC18103955 chalcone synthase
18105101 O, N LOC18105101 putative casein kinase II subunit beta-4
18105787 O, N LOC18105787 two-component response regulator-like APRR1
18107444 S, V LOC18107444 zinc finger protein CONSTANS-LIKE 2
127905560 O, N LOC127905560 transcription factor TCP21-like


List of genes in mtr


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
11405950 C, N LOC11405950 phytochrome A
11406493 O, N LOC11406493 transcription factor PIF3
11407003 O, Y LOC11407003 chalcone synthase 4
11410501 O, Y LOC11410501 protein FLOWERING LOCUS T
11410562 O, P LOC11410562 protein GIGANTEA
11410839 M, C LOC11410839 casein kinase II subunit alpha-2
11411033 O, N LOC11411033 protein SPA1-RELATED 3
11411483 O, C LOC11411483 chalcone synthase 1A
11412120 O, N LOC11412120 two-component response regulator-like APRR3
11417024 O, Y LOC11417024 adagio protein 3
11418796 O, Y LOC11418796 chalcone synthase 2
11418875 M, Y LOC11418875 cryptochrome-1
11419346 O, Y LOC11419346 chalcone synthase 5
11420025 C, Y LOC11420025 phytochrome B-2
11420334 O, Y LOC11420334 chalcone synthase 8
11420561 C, N LOC11420561 transcription factor HY5-like
11420610 O, Y LOC11420610 chalcone synthase 2
11420611 O, Y LOC11420611 chalcone synthase 2
11420758 O, N LOC11420758 E3 ubiquitin-protein ligase COP1
11421144 O, Y LOC11421144 chalcone synthase 2
11422952 O, C LOC11422952 protein FLOWERING LOCUS T
11423615 O, N LOC11423615 transcription factor TCP7
11423879 O, N LOC11423879 transcription factor TCP7
11424172 O, Y LOC11424172 chalcone synthase 2
11426713 O, N LOC11426713 two-component response regulator-like APRR9
11427085 O, Y LOC11427085 protein HEADING DATE 3A
11427226 O, N LOC11427226 transcription factor PIF3
11428875 O, C LOC11428875 cryptochrome-1
11428910 O, Y LOC11428910 chalcone synthase 5
11430037 O, N LOC11430037 transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15
11430161 O, N LOC11430161 casein kinase II subunit beta-1
11431402 O, N LOC11431402 protein EARLY FLOWERING 3
11432385 O, N LOC11432385 protein LATE ELONGATED HYPOCOTYL
11434455 C, C LOC11434455 casein kinase II subunit alpha-2
11436702 O, Y LOC11436702 chalcone synthase 4
11437198 O, N LOC11437198 protein SPA1-RELATED 2
11437345 O, N LOC11437345 two-component response regulator-like APRR9
11438511 O, Y LOC11438511 chalcone synthase 1A
11438588 O, C LOC11438588 protein HEADING DATE 3A
11439469 O, Y LOC11439469 chalcone synthase 1B
11440049 O, Y LOC11440049 chalcone synthase
11441025 O, Y LOC11441025 protein FLOWERING LOCUS T
11442534 O, Y LOC11442534 chalcone synthase 4
11445386 O, N LOC11445386 adagio protein 1
25482012 O, N LOC25482012 ELF3-like protein 2
25484061 O, N LOC25484061 two-component response regulator-like APRR7
25484452 M, C LOC25484452 cryptochrome-1
25485043 O, Y LOC25485043 chalcone synthase 8
25488813 O, N LOC25488813 two-component response regulator-like APRR1
25489717 M, Y LOC25489717 stilbene synthase 4
25493524 M, C LOC25493524 casein kinase II subunit alpha
25493577 O, N LOC25493577 casein kinase II subunit beta-1
25493836 O, N LOC25493836 two-component response regulator-like APRR1
25494497 O, C LOC25494497 chalcone synthase 9
25494498 O, Y LOC25494498 chalcone synthase 9
25495876 O, Y LOC25495876 protein FLOWERING LOCUS T
25497637 O, C LOC25497637 zinc finger protein CONSTANS-LIKE 2
25499670 O, Y LOC25499670 chalcone synthase 4
25500383 O, N LOC25500383 protein HEADING DATE 3B
25500611 O, N LOC25500611 two-component response regulator-like APRR5
25500742 O, N LOC25500742 protein SUPPRESSOR OF PHYA-105 1
120577917 O, Y LOC120577917 chalcone synthase 4


List of genes in tae


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
542789 O, Y LOC542789 casein kinase II subunit alpha-2
542970 O, N LOC542970 protein GIGANTEA
543104 O, Y LOC543104 chalcone synthase 2
543392 O, C LOC543392 protein HEADING DATE 3A
100037528 O, Y LOC100037528 chalcone synthase 2
100037541 O, C LOC100037541 protein HEADING DATE 3A
100127071 O, N LOC100127071 ELF3-like protein 2
100127072 O, Y LOC100127072 adagio-like protein 3
100136971 O, M LOC100136971 cryptochrome-1
100136972 M, N LOC100136972 cryptochrome-1
100137004 M, C LOC100137004 phytochrome B
100682447 O, Y LOC100682447 putative adagio-like protein 2
100682474 O, N LOC100682474 protein LHY
100873141 M, C LOC100873141 phytochrome A type 3
100873142 C, C LOC100873142 phytochrome A type 3
123040104 O, Y LOC123040104 chalcone synthase 2
123040799 O, Y LOC123040799 protein RICE FLOWERING LOCUS T 1
123042254 O, Y LOC123042254 protein FLOWERING LOCUS T
123042591 O, C LOC123042591 protein FLOWERING LOCUS T-like
123042593 O, Y LOC123042593 protein FLOWERING LOCUS T-like
123043495 C, N LOC123043495 two-component response regulator-like PRR37
123043497 C, N LOC123043497 two-component response regulator-like PRR37
123045091 O, Y LOC123045091 casein kinase II subunit alpha-2
123045624 O, Y LOC123045624 cryptochrome-1
123045836 O, Y LOC123045836 protein FLOWERING LOCUS T
123046191 M, N LOC123046191 casein kinase II subunit beta-1
123047221 O, Y LOC123047221 chalcone synthase 2
123047543 O, Y LOC123047543 chalcone synthase 2
123048273 O, Y LOC123048273 chalcone synthase 2
123048840 O, Y LOC123048840 protein RICE FLOWERING LOCUS T 1
123049880 O, C LOC123049880 chalcone synthase 1-like
123050193 O, C LOC123050193 protein FLOWERING LOCUS T-like
123050502 O, Y LOC123050502 protein FLOWERING LOCUS T-like
123050504 O, C LOC123050504 protein FLOWERING LOCUS T-like
123051067 O, Y LOC123051067 chalcone synthase 2
123051070 O, Y LOC123051070 chalcone synthase 2
123051362 M, N LOC123051362 two-component response regulator-like PRR37
123052124 O, N LOC123052124 putative casein kinase II subunit beta-4
123052750 O, N LOC123052750 putative casein kinase II subunit beta-4
123052927 O, Y LOC123052927 casein kinase II subunit alpha-2
123053473 O, Y LOC123053473 cryptochrome-1
123053720 O, Y LOC123053720 protein FLOWERING LOCUS T
123054069 M, N LOC123054069 casein kinase II subunit beta-1
123055015 O, Y LOC123055015 chalcone synthase 2
123056082 O, Y LOC123056082 protein FLOWERING LOCUS T-like
123056583 O, C LOC123056583 protein FLOWERING LOCUS T-like
123060540 C, N LOC123060540 transcription factor HY5
123060690 M, C LOC123060690 protein HEADING DATE 3A
123062017 O, N LOC123062017 protein SPA1-RELATED 4
123064274 M, C LOC123064274 protein FLOWERING LOCUS T-like
123064276 O, Y LOC123064276 protein FLOWERING LOCUS T
123064277 O, Y LOC123064277 protein FLOWERING LOCUS T-like
123067123 O, C LOC123067123 protein FLOWERING LOCUS T-like
123068975 C, N LOC123068975 protein GIGANTEA
123069052 O, N LOC123069052 protein SUPPRESSOR OF PHYA-105 1
123069101 C, N LOC123069101 transcription factor HY5
123069202 O, Y LOC123069202 protein RICE FLOWERING LOCUS T 1
123070723 O, N LOC123070723 protein SPA1-RELATED 3
123071043 O, N LOC123071043 ELF3-like protein 2
123071871 O, M LOC123071871 chalcone synthase-like
123073525 O, C_M LOC123073525 chalcone synthase 2-like
123077506 O, N LOC123077506 protein GIGANTEA
123077618 C, N LOC123077618 transcription factor HY5
123077724 O, Y LOC123077724 protein RICE FLOWERING LOCUS T 1
123079128 O, C LOC123079128 protein SPA1-RELATED 3
123081092 O, Y LOC123081092 protein FLOWERING LOCUS T-like
123081094 O, Y LOC123081094 protein FLOWERING LOCUS T-like
123085018 M, Y LOC123085018 casein kinase II subunit alpha-2
123085525 O, N LOC123085525 two-component response regulator-like PRR73
123085598 O, Y LOC123085598 chalcone synthase 2-like
123086525 O, N LOC123086525 two-component response regulator-like APRR3
123091474 O, N LOC123091474 two-component response regulator-like APRR3
123092340 M, C LOC123092340 phytochrome B
123092509 O, N LOC123092509 two-component response regulator-like PRR73
123093046 M, C LOC123093046 casein kinase II subunit alpha-2
123093986 M, M LOC123093986 putative casein kinase II subunit beta-4
123094460 O, Y LOC123094460 protein FLOWERING LOCUS T-like
123094790 O, Y LOC123094790 adagio-like protein 3
123096439 O, N LOC123096439 two-component response regulator-like APRR3
123097663 M, C LOC123097663 phytochrome B
123097824 O, N LOC123097824 two-component response regulator-like PRR73
123098329 M, Y LOC123098329 casein kinase II subunit alpha-2
123099180 M, M LOC123099180 putative casein kinase II subunit beta-4
123099565 O, Y LOC123099565 protein FLOWERING LOCUS T
123104381 O, C LOC123104381 protein FLOWERING LOCUS T
123104431 M, Y LOC123104431 chalcone synthase 2-like
123104441 M, Y LOC123104441 chalcone synthase 2-like
123104448 M, Y LOC123104448 chalcone synthase 2-like
123104457 M, Y LOC123104457 chalcone synthase 2-like
123104466 M, Y LOC123104466 chalcone synthase 2-like
123104469 M, Y LOC123104469 chalcone synthase 2
123104502 M, Y LOC123104502 chalcone synthase 2-like
123104544 O, N LOC123104544 two-component response regulator-like PRR95
123105115 M, M LOC123105115 casein kinase II subunit alpha-2
123105124 C, C LOC123105124 casein kinase II subunit alpha-2
123106147 M, M LOC123106147 putative casein kinase II subunit beta-4
123106887 O, C LOC123106887 protein FLOWERING LOCUS T-like
123110986 O, N LOC123110986 transcription factor APG
123112663 O, Y LOC123112663 protein FLOWERING LOCUS T
123112819 O, N LOC123112819 two-component response regulator-like PRR95
123113407 M, M LOC123113407 casein kinase II subunit alpha-2
123113415 C, C LOC123113415 casein kinase II subunit alpha-2
123115998 O, C LOC123115998 protein FLOWERING LOCUS T-like
123122302 O, N LOC123122302 two-component response regulator-like PRR95
123122925 S, C LOC123122925 casein kinase II subunit alpha-2
123122932 M, C LOC123122932 casein kinase II subunit alpha-2
123123470 O, Y LOC123123470 chalcone synthase 2
123123471 O, Y LOC123123471 chalcone synthase 2
123124626 O, C LOC123124626 protein FLOWERING LOCUS T-like
123127245 O, N LOC123127245 transcription factor HY5
123127529 O, N LOC123127529 cryptochrome-1
123127635 O, Y LOC123127635 protein FLOWERING LOCUS T
123127724 M, N LOC123127724 cryptochrome-1
123127760 O, N LOC123127760 two-component response regulator-like PRR1
123128199 O, N LOC123128199 putative casein kinase II subunit beta-4
123128534 O, N LOC123128534 E3 ubiquitin-protein ligase COP1
123129152 O, N LOC123129152 transcription factor TCP21
123129550 O, Y LOC123129550 protein FLOWERING LOCUS T-like
123130067 C, C LOC123130067 WD repeat-containing protein RUP2
123130709 O, N LOC123130709 transcription factor TCP7
123132267 O, Y LOC123132267 putative adagio-like protein 2
123133345 C, C LOC123133345 WD repeat-containing protein RUP2
123134267 O, N LOC123134267 transcription factor TCP7-like
123134448 M, N LOC123134448 transcription factor TCP7
123136934 O, N LOC123136934 transcription factor HY5
123137395 O, Y LOC123137395 protein FLOWERING LOCUS T
123137489 O, N LOC123137489 two-component response regulator-like PRR1
123138400 O, N LOC123138400 E3 ubiquitin-protein ligase COP1
123139125 O, Y LOC123139125 protein FLOWERING LOCUS T-like
123140068 O, N LOC123140068 transcription factor TCP21
123141504 O, Y LOC123141504 protein FLOWERING LOCUS T
123141558 O, N LOC123141558 transcription factor TCP7-like
123142539 O, Y LOC123142539 protein FLOWERING LOCUS T-like
123143163 C, C LOC123143163 WD repeat-containing protein RUP2
123143828 O, Y LOC123143828 putative adagio-like protein 2
123144357 O, N LOC123144357 transcription factor HY5
123144624 O, N LOC123144624 cryptochrome-1
123144843 O, N LOC123144843 two-component response regulator-like PRR1
123144872 M, N LOC123144872 cryptochrome-1
123145654 O, N LOC123145654 E3 ubiquitin-protein ligase COP1
123146326 O, N LOC123146326 transcription factor TCP21
123147271 O, N LOC123147271 protein LHY
123147298 O, N LOC123147298 protein SUPPRESSOR OF PHYA-105 1
123148150 O, N LOC123148150 transcription factor HY5
123148788 O, Y LOC123148788 adagio-like protein 1
123150313 O, C LOC123150313 protein HEADING DATE 3A
123156711 O, Y LOC123156711 protein FLOWERING LOCUS T-like
123157050 O, K LOC123157050 chalcone synthase 2-like
123159113 O, Y LOC123159113 chalcone synthase 2
123159780 O, Y LOC123159780 chalcone synthase 2
123162402 O, C LOC123162402 protein HEADING DATE 3A
123162655 O, N LOC123162655 transcription factor HY5
123163641 O, Y LOC123163641 chalcone synthase 2-like
123163826 O, N LOC123163826 transcription factor HY5
123167076 O, N LOC123167076 protein LHY
123168584 O, Y LOC123168584 adagio-like protein 1
123172147 O, N LOC123172147 putative casein kinase II subunit beta-4
123179972 M, Y LOC123179972 chalcone synthase 2-like
123179973 M, Y LOC123179973 chalcone synthase 2-like
123180361 O, N LOC123180361 transcription factor APG
123181651 O, N LOC123181651 putative casein kinase II subunit beta-4
123183200 O, N LOC123183200 protein SUPPRESSOR OF PHYA-105 1
123183422 O, N LOC123183422 ELF3-like protein 2
123184282 O, Y LOC123184282 chalcone synthase 2
123184844 O, Y LOC123184844 protein RICE FLOWERING LOCUS T 1
123185734 M, N LOC123185734 transcription factor TCP7
123186222 O, C LOC123186222 protein FLOWERING LOCUS T-like
123186466 O, C LOC123186466 protein FLOWERING LOCUS T-like
123186467 O, C LOC123186467 protein FLOWERING LOCUS T-like
123186969 M, Y LOC123186969 chalcone synthase 2
123186993 O, Y LOC123186993 chalcone synthase 2
123187050 O, Y LOC123187050 chalcone synthase 2
123188649 C, N LOC123188649 putative casein kinase II subunit beta-4
123189391 O, Y LOC123189391 cryptochrome-1
123189598 O, Y LOC123189598 protein FLOWERING LOCUS T
123189958 M, N LOC123189958 casein kinase II subunit beta-1
123190549 O, N LOC123190549 transcription factor APG
123190869 O, Y LOC123190869 chalcone synthase 2
123192008 M, C LOC123192008 protein FLOWERING LOCUS T-like


List of genes in hvu


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
123395230 M, Y LOC123395230 chalcone synthase 2-like
123398268 O, C LOC123398268 protein FLOWERING LOCUS T-like
123399868 O, Y LOC123399868 protein FLOWERING LOCUS T-like
123400068 O, N LOC123400068 two-component response regulator-like PRR95
123401310 O, N LOC123401310 two-component response regulator-like PRR1
123401420 O, N LOC123401420 cryptochrome-1-like
123402164 O, N LOC123402164 transcription factor TCP7-like
123402650 O, N LOC123402650 E3 ubiquitin-protein ligase COP1
123402759 O, N LOC123402759 transcription factor HY5-like
123403220 O, N LOC123403220 transcription factor TCP21-like
123403417 C, C LOC123403417 WD repeat-containing protein RUP2-like
123403951 O, Y LOC123403951 protein FLOWERING LOCUS T-like
123405234 O, Y LOC123405234 protein FLOWERING LOCUS T-like
123406235 O, Y LOC123406235 cryptochrome-1
123406339 O, Y LOC123406339 putative adagio-like protein 2
123407075 O, Y LOC123407075 adagio-like protein 1
123407924 O, N LOC123407924 protein LHY
123409685 O, C LOC123409685 protein HEADING DATE 3A
123410899 O, N LOC123410899 homeobox-leucine zipper protein ROC4-like
123413561 O, N LOC123413561 transcription factor HY5
123420058 M, Y LOC123420058 chalcone synthase 2
123424219 O, N LOC123424219 transcription factor APG-like
123424400 O, Y LOC123424400 chalcone synthase 2-like
123424581 C, N LOC123424581 two-component response regulator-like PRR37
123426079 C, N LOC123426079 putative casein kinase II subunit beta-4
123426341 O, Y LOC123426341 casein kinase II subunit alpha-2
123426879 O, Y LOC123426879 cryptochrome-1-like
123427075 O, Y LOC123427075 protein FLOWERING LOCUS T-like
123427395 M, N LOC123427395 casein kinase II subunit beta-1-like
123428233 O, Y LOC123428233 chalcone synthase 1
123429115 O, Y LOC123429115 chalcone synthase 2
123429547 O, Y LOC123429547 protein RICE FLOWERING LOCUS T 1-like
123430559 M, N LOC123430559 transcription factor TCP7-like
123430914 O, S LOC123430914 protein FLOWERING LOCUS T-like
123431159 O, C LOC123431159 protein FLOWERING LOCUS T-like
123431161 O, C LOC123431161 protein FLOWERING LOCUS T-like
123439104 O, N LOC123439104 putative casein kinase II subunit beta-4
123439142 O, Y LOC123439142 protein FLOWERING LOCUS T-like
123442440 M, Y LOC123442440 chalcone synthase 2-like
123442515 O, Y LOC123442515 chalcone synthase-like
123442530 M, Y LOC123442530 chalcone synthase 2-like
123442618 M, Y LOC123442618 chalcone synthase 2-like
123442699 M, Y LOC123442699 chalcone synthase 2-like
123442790 M, Y LOC123442790 chalcone synthase 2-like
123442876 M, Y LOC123442876 chalcone synthase 2-like
123442959 O, N LOC123442959 protein GIGANTEA
123442962 M, Y LOC123442962 chalcone synthase 2-like
123443044 M, Y LOC123443044 chalcone synthase 2-like
123443046 C, N LOC123443046 transcription factor HY5-like
123443129 O, Y LOC123443129 protein HEADING DATE 3A-like
123444323 O, N LOC123444323 protein SPA1-RELATED 4-like
123447547 M, C LOC123447547 phytochrome A type 3
123447574 O, Y LOC123447574 protein FLOWERING LOCUS T-like
123448023 O, N LOC123448023 two-component response regulator-like APRR3
123448527 O, Y LOC123448527 adagio-like protein 3
123448812 C, C LOC123448812 phytochrome B
123448955 O, N LOC123448955 two-component response regulator-like PRR73
123449374 M, C LOC123449374 casein kinase II subunit alpha-2-like
123450082 C, M LOC123450082 putative casein kinase II subunit beta-4
123451067 O, N LOC123451067 protein SUPPRESSOR OF PHYA-105 1-like
123451121 O, Y LOC123451121 protein FLOWERING LOCUS T-like
123452358 C, M LOC123452358 casein kinase II subunit alpha-2-like
123452366 M, C LOC123452366 casein kinase II subunit alpha-2-like
123452745 O, N LOC123452745 ELF3-like protein 2


List of genes in ghi


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
107886106 O, N LOC107886106 two-component response regulator-like APRR1
107886408 O, N LOC107886408 casein kinase II subunit beta-1
107886883 C, N LOC107886883 transcription factor TCP21
107887192 C, C LOC107887192 WD repeat-containing protein RUP2
107888301 M, N LOC107888301 phytochrome A
107888447 O, C LOC107888447 chalcone synthase
107888463 O, Y LOC107888463 chalcone synthase 2
107889101 O, N LOC107889101 protein HEADING DATE 3B
107889731 O, N LOC107889731 two-component response regulator-like APRR7
107891010 O, C LOC107891010 two-component response regulator-like APRR7
107891717 O, N LOC107891717 protein HEADING DATE 3B
107893266 M, N LOC107893266 phytochrome A
107894056 O, N LOC107894056 transcription factor TCP21
107896595 M, C LOC107896595 phytochrome B
107897115 S, C LOC107897115 chalcone synthase
107897841 O, Y LOC107897841 chalcone synthase 1
107897842 O, Y LOC107897842 chalcone synthase 1-like
107898818 O, N LOC107898818 two-component response regulator-like APRR7
107899416 C, Y LOC107899416 casein kinase II subunit alpha
107900827 O, C LOC107900827 cryptochrome-1
107902594 O, N LOC107902594 protein SPA1-RELATED 3
107903633 O, Y LOC107903633 adagio protein 3
107904227 O, N LOC107904227 two-component response regulator-like APRR5
107904548 O, N LOC107904548 two-component response regulator-like APRR5
107905111 O, C LOC107905111 cryptochrome-1
107906126 O, N LOC107906126 protein HEADING DATE 3B
107906184 O, N LOC107906184 two-component response regulator-like APRR3
107907349 O, N LOC107907349 adagio protein 1
107907495 O, N LOC107907495 adagio protein 1
107909021 O, N LOC107909021 transcription factor TCP21
107909115 O, Y LOC107909115 protein HEADING DATE 3A
107909196 C, N LOC107909196 transcription factor HY5
107909782 O, N LOC107909782 protein SUPPRESSOR OF PHYA-105 1
107910471 O, P LOC107910471 protein GIGANTEA
107911854 O, N LOC107911854 putative casein kinase II subunit beta-4
107912198 O, N LOC107912198 casein kinase II subunit beta-2
107912232 O, N LOC107912232 uncharacterized LOC107912232
107912274 S, N LOC107912274 protein LATE ELONGATED HYPOCOTYL
107912282 O, N LOC107912282 two-component response regulator-like APRR5
107912380 O, Y LOC107912380 chalcone synthase 2-like
107912628 M, C LOC107912628 E3 ubiquitin-protein ligase COP1
107913276 C, C LOC107913276 casein kinase II subunit alpha
107914084 O, P LOC107914084 protein GIGANTEA
107914126 O, Y LOC107914126 chalcone synthase
107914136 O, C LOC107914136 chalcone synthase 2-like
107914335 S, C LOC107914335 casein kinase II subunit alpha-2
107914891 O, Y LOC107914891 chalcone synthase 1-like
107914895 O, Y LOC107914895 chalcone synthase 1-like
107915293 O, C LOC107915293 chalcone synthase
107916208 O, C LOC107916208 phytochrome B
107916965 O, N LOC107916965 zinc finger protein CONSTANS-LIKE 2
107918113 O, N LOC107918113 adagio protein 3
107919516 O, N LOC107919516 adagio protein 1
107919855 O, N LOC107919855 casein kinase II subunit beta-1
107919962 O, N LOC107919962 transcription factor TCP21
107922146 O, Y LOC107922146 adagio protein 3
107922980 O, N LOC107922980 two-component response regulator-like APRR5
107922999 C, N LOC107922999 uncharacterized LOC107922999
107923114 O, N LOC107923114 protein LATE ELONGATED HYPOCOTYL
107923194 O, N LOC107923194 protein LATE ELONGATED HYPOCOTYL
107923391 O, N LOC107923391 putative casein kinase II subunit beta-4
107923949 S, N LOC107923949 protein LATE ELONGATED HYPOCOTYL
107924358 O, N LOC107924358 protein SUPPRESSOR OF PHYA-105 1
107924438 O, N LOC107924438 two-component response regulator-like APRR3
107924485 O, N LOC107924485 E3 ubiquitin-protein ligase COP1
107924707 O, N LOC107924707 casein kinase II subunit alpha-2
107924805 O, N LOC107924805 casein kinase II subunit beta-2
107924934 O, N LOC107924934 E3 ubiquitin-protein ligase COP1
107925578 O, Y LOC107925578 casein kinase II subunit alpha-2
107926267 O, N LOC107926267 adagio protein 1
107926305 O, N LOC107926305 casein kinase II subunit beta-1
107927211 O, N LOC107927211 transcription factor PIF3
107927759 O, Y LOC107927759 chalcone synthase 1
107928282 O, Y LOC107928282 protein HEADING DATE 3A
107929100 C, C LOC107929100 cryptochrome-1
107929466 O, N LOC107929466 two-component response regulator-like APRR5
107929691 C, N LOC107929691 casein kinase II subunit beta-1
107929929 O, N LOC107929929 protein EARLY FLOWERING 3
107929930 O, N LOC107929930 protein EARLY FLOWERING 3
107932568 C, C LOC107932568 casein kinase II subunit alpha
107932569 C, C LOC107932569 casein kinase II subunit alpha-2
107933739 O, N LOC107933739 casein kinase II subunit beta-2
107934074 O, N LOC107934074 putative casein kinase II subunit beta-4
107934810 O, Y LOC107934810 chalcone synthase 2
107934821 O, Y LOC107934821 chalcone synthase 2-like
107935346 O, N LOC107935346 E3 ubiquitin-protein ligase COP1
107936243 O, N LOC107936243 cryptochrome-1
107937447 O, N LOC107937447 casein kinase II subunit beta-1
107938086 O, N LOC107938086 two-component response regulator-like APRR5
107939622 M, C LOC107939622 phytochrome A
107940541 O, N LOC107940541 cryptochrome-1
107941769 O, N LOC107941769 casein kinase II subunit beta-1
107941899 O, N LOC107941899 casein kinase II subunit alpha-2
107942277 O, N LOC107942277 transcription factor TCP7
107944105 M, C LOC107944105 casein kinase II subunit alpha
107944141 O, N LOC107944141 casein kinase II subunit beta-1
107945581 O, N LOC107945581 putative casein kinase II subunit beta-4
107945774 O, N LOC107945774 zinc finger protein CONSTANS-LIKE 2
107945938 O, N LOC107945938 protein LATE ELONGATED HYPOCOTYL
107946100 O, N LOC107946100 transcription factor TCP7
107946295 O, Y LOC107946295 adagio protein 3
107946703 C, N LOC107946703 casein kinase II subunit beta-1
107947084 O, N LOC107947084 protein SPA1-RELATED 2
107947107 O, N LOC107947107 protein SPA1-RELATED 2
107947190 O, N LOC107947190 two-component response regulator-like APRR5
107949814 O, N LOC107949814 two-component response regulator-like APRR1
107951610 O, P LOC107951610 protein GIGANTEA
107952433 O, N LOC107952433 protein EARLY FLOWERING 3-like
107953017 O, N LOC107953017 transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15
107953871 O, N LOC107953871 protein EARLY FLOWERING 3
107953872 O, N LOC107953872 protein EARLY FLOWERING 3
107954397 O, N LOC107954397 transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15
107955422 O, N LOC107955422 transcription factor PIF3
107957085 O, Y LOC107957085 chalcone synthase 1
107957106 O, N LOC107957106 two-component response regulator-like PRR37
107957756 O, C LOC107957756 cryptochrome-1
107959066 O, N LOC107959066 two-component response regulator-like APRR3
121203436 O, N LOC121203436 casein kinase II subunit beta-1
121206241 C, C LOC121206241 WD repeat-containing protein RUP2
121209328 M, C LOC121209328 phytochrome A
121209463 M, C LOC121209463 casein kinase II subunit alpha
121210129 O, N LOC121210129 two-component response regulator-like APRR7
121210912 O, N LOC121210912 protein LATE ELONGATED HYPOCOTYL
121214677 O, C LOC121214677 WD repeat-containing protein RUP2
121217871 O, P LOC121217871 protein GIGANTEA
121217897 O, C LOC121217897 cryptochrome-1
121219986 C, N LOC121219986 transcription factor HY5
121221044 O, C LOC121221044 cryptochrome-1
121222419 O, Y LOC121222419 casein kinase II subunit alpha-2
121226467 C, C LOC121226467 WD repeat-containing protein RUP2


List of genes in bna


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
106345289 O, N LOC106345289 transcription factor HY5-like
106346267 M, C LOC106346267 phytochrome A
106346269 M, N LOC106346269 transcription factor PIF3
106348254 O, N LOC106348254 two-component response regulator-like APRR5
106348344 O, N LOC106348344 transcription factor TCP7-like
106348478 O, N LOC106348478 two-component response regulator-like APRR5
106349215 O, N LOC106349215 zinc finger protein CONSTANS-LIKE 2
106349428 O, N LOC106349428 protein SPA1-RELATED 3
106351799 O, N LOC106351799 cyclic dof factor 1-like
106352197 O, N LOC106352197 zinc finger protein CONSTANS-LIKE 2-like
106353123 O, N LOC106353123 casein kinase II subunit beta-3
106353616 O, N LOC106353616 casein kinase II subunit beta-1
106357361 O, Y LOC106357361 protein FLOWERING LOCUS T-like
106357634 O, N LOC106357634 adagio protein 2-like
106358161 C, Y LOC106358161 phytochrome B
106364827 O, Y LOC106364827 protein TWIN SISTER of FT-like
106365002 M, C LOC106365002 zinc finger protein CONSTANS-LIKE 1-like
106366007 O, N LOC106366007 two-component response regulator-like APRR5
106366040 O, N LOC106366040 WD repeat-containing protein RUP2
106366054 O, N LOC106366054 transcription factor TCP7
106367233 O, Y LOC106367233 chalcone synthase 3
106368547 O, N LOC106368547 protein EARLY FLOWERING 3
106369019 O, N LOC106369019 cyclic dof factor 1
106369426 M, C LOC106369426 cryptochrome-2-like
106370571 O, N LOC106370571 zinc finger protein CONSTANS
106370900 O, N LOC106370900 protein LHY
106370906 O, N LOC106370906 phytochrome B-like
106371016 M, M LOC106371016 cryptochrome-2-like
106371342 C, C LOC106371342 casein kinase II subunit alpha-4, chloroplastic
106372182 O, N LOC106372182 zinc finger protein CONSTANS-LIKE 1
106372253 O, Y LOC106372253 chalcone synthase 3-like
106372421 C, N LOC106372421 transcription factor HY5
106372604 O, N LOC106372604 two-component response regulator-like APRR7
106374243 O, N LOC106374243 cyclic dof factor 1
106378767 O, K LOC106378767 chalcone synthase-like
106380102 O, N LOC106380102 transcription factor TCP7
106380529 O, N LOC106380529 transcription factor TCP21
106381881 C, N LOC106381881 casein kinase II subunit beta-1
106382203 O, N LOC106382203 two-component response regulator-like APRR1
106382267 O, Y LOC106382267 chalcone synthase-like
106382607 O, N LOC106382607 two-component response regulator-like APRR5
106383518 C, N LOC106383518 transcription factor HY5
106384975 O, N LOC106384975 transcription factor TCP21-like
106385812 O, N LOC106385812 transcription factor HY5-like
106390407 M, C LOC106390407 zinc finger protein CONSTANS-LIKE 1
106390880 S, C LOC106390880 casein kinase II subunit alpha-2-like
106391328 C, N LOC106391328 transcription factor HY5
106391972 O, N LOC106391972 two-component response regulator-like APRR9
106392142 C, C LOC106392142 casein kinase II subunit alpha-4, chloroplastic
106395002 M, Y LOC106395002 protein FLOWERING LOCUS T-like
106395832 O, N LOC106395832 putative casein kinase II subunit beta-4
106396324 O, N LOC106396324 E3 ubiquitin-protein ligase COP1
106396525 O, N LOC106396525 transcription factor TCP21-like
106397555 O, N LOC106397555 transcription factor PIF3
106398597 C, N LOC106398597 casein kinase II subunit beta-1-like
106399293 O, N LOC106399293 two-component response regulator-like APRR7
106400371 O, P LOC106400371 protein GIGANTEA
106400599 C, N LOC106400599 protein SPA1-RELATED 3-like
106400740 M, C LOC106400740 phytochrome A
106400775 O, N LOC106400775 phytochrome B-like
106401205 O, N LOC106401205 protein EARLY FLOWERING 3-like
106401206 O, N LOC106401206 protein EARLY FLOWERING 3
106401784 O, N LOC106401784 protein LHY-like
106402474 O, N LOC106402474 casein kinase II subunit beta-3
106402982 O, C LOC106402982 protein FLOWERING LOCUS T
106404304 O, N LOC106404304 two-component response regulator-like APRR5
106404327 O, Y LOC106404327 casein kinase II subunit alpha-2
106405808 C, N LOC106405808 protein SPA1-RELATED 3
106406772 O, N LOC106406772 transcription factor TCP21
106407083 O, N LOC106407083 protein LHY
106410825 O, C LOC106410825 protein SPA1-RELATED 4-like
106411089 M, N LOC106411089 transcription factor HY5-like
106413504 O, N LOC106413504 casein kinase II subunit beta-1
106413679 O, N LOC106413679 protein EARLY FLOWERING 3
106414855 O, N LOC106414855 casein kinase II subunit beta-2
106415001 O, N LOC106415001 protein SUPPRESSOR OF PHYA-105 1
106415367 O, N LOC106415367 two-component response regulator-like APRR3
106415652 O, N LOC106415652 casein kinase II subunit beta-3
106416123 C, C LOC106416123 casein kinase II subunit alpha-4, chloroplastic
106417700 C, C LOC106417700 phytochrome A
106419010 O, N LOC106419010 transcription factor TCP21
106419805 O, N LOC106419805 transcription factor PIF3
106420085 C, C LOC106420085 phytochrome A
106420400 S, C LOC106420400 casein kinase II subunit alpha-2
106422131 O, C LOC106422131 cryptochrome-1
106422373 O, N LOC106422373 protein SPA1-RELATED 2
106424300 O, C LOC106424300 cryptochrome-2
106424649 O, N LOC106424649 zinc finger protein CONSTANS-LIKE 1
106424669 O, N LOC106424669 zinc finger protein CONSTANS
106425116 O, Y LOC106425116 chalcone synthase-like
106425698 O, N LOC106425698 transcription factor TCP7-like
106426212 O, Y LOC106426212 protein TWIN SISTER of FT
106426632 O, Y LOC106426632 chalcone synthase 3-like
106428080 O, N LOC106428080 two-component response regulator-like APRR1
106428408 O, C LOC106428408 WD repeat-containing protein RUP2-like
106428471 O, N LOC106428471 two-component response regulator-like APRR5
106429492 O, N LOC106429492 casein kinase II subunit beta-2-like
106429586 O, C LOC106429586 cryptochrome-1-like
106429646 O, N LOC106429646 protein SUPPRESSOR OF PHYA-105 1
106429770 O, P LOC106429770 protein GIGANTEA
106431192 O, Y LOC106431192 chalcone synthase 3
106431200 O, Y LOC106431200 casein kinase II subunit alpha-1-like
106431878 C, N LOC106431878 transcription factor HY5-like
106433001 O, N LOC106433001 adagio protein 2-like
106438226 O, N LOC106438226 putative casein kinase II subunit beta-4
106438276 O, N LOC106438276 protein SUPPRESSOR OF PHYA-105 1-like
106439695 O, N LOC106439695 protein SPA1-RELATED 2
106439888 O, N LOC106439888 transcription factor TCP7
106439924 O, N LOC106439924 two-component response regulator-like APRR1
106440228 O, N LOC106440228 casein kinase II subunit beta-2
106446206 O, N LOC106446206 casein kinase II subunit beta-2
106446460 C, C LOC106446460 casein kinase II subunit alpha-4, chloroplastic
106448060 S, Y LOC106448060 casein kinase II subunit alpha-2
106450471 O, N LOC106450471 protein CCA1
106450475 O, N LOC106450475 two-component response regulator-like APRR9
106450516 O, N LOC106450516 protein SUPPRESSOR OF PHYA-105 1
106450520 O, N LOC106450520 two-component response regulator-like APRR7
106450778 O, N LOC106450778 putative casein kinase II subunit beta-4
106451277 O, N LOC106451277 E3 ubiquitin-protein ligase COP1-like
111197715 O, C LOC111197715 cryptochrome-2
111197909 O, N LOC111197909 casein kinase II subunit beta-2
111200310 O, N LOC111200310 casein kinase II subunit alpha-1
111204286 O, Y LOC111204286 chalcone synthase 3-like
111207300 O, Y LOC111207300 protein FLOWERING LOCUS T
111207855 C, N LOC111207855 cyclic dof factor 1-like
111208558 O, N LOC111208558 casein kinase II subunit beta-3
111210456 O, N LOC111210456 transcription factor TCP21
111213971 O, C LOC111213971 protein FLOWERING LOCUS T
125574804 O, N LOC125574804 protein LHY-like
125575639 O, N LOC125575639 protein LHY-like
125577739 O, N LOC125577739 transcription factor TCP7-like
125577741 O, N LOC125577741 two-component response regulator-like APRR1
125578610 O, N LOC125578610 transcription factor PIF3-like
125579034 O, Y LOC125579034 chalcone synthase 1
125579112 O, N LOC125579112 two-component response regulator-like APRR7
125580461 C, N LOC125580461 protein SPA1-RELATED 3
125581422 C, N LOC125581422 transcription factor HY5-like
125584339 O, N LOC125584339 putative casein kinase II subunit beta-4
125587632 O, N LOC125587632 transcription factor HY5-like
125591609 S, C LOC125591609 casein kinase II subunit alpha-2-like
125593107 O, N LOC125593107 zinc finger protein CONSTANS-like
125595220 O, N LOC125595220 protein LHY-like
125606336 C, N LOC125606336 phytochrome B
125609007 O, N LOC125609007 transcription factor HY5-like


List of genes in cre


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
5715130 O, M CHLRE_01g016556v5 uncharacterized protein
5715803 O, C CHLRE_01g053850v5 uncharacterized protein
5715871 M, Y CHLRE_14g619166v5 uncharacterized protein
5719648 O, M CHLRE_12g549800v5 uncharacterized protein
5726985 O, Y CHLRE_16g665600v5 uncharacterized protein


List of genes in sbi


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
8054807 O, Y LOC8054807 protein FLOWERING LOCUS T
8056975 O, Y LOC8056975 chalcone synthase 5
8056976 O, Y LOC8056976 chalcone synthase 4
8057016 O, Y LOC8057016 adagio-like protein 3
8058182 O, Y LOC8058182 protein TWIN SISTER of FT
8058579 O, N LOC8058579 two-component response regulator-like APRR9
8059209 O, N LOC8059209 protein SPA1-RELATED 4
8059991 M, C LOC8059991 phytochrome a
8061952 O, Y LOC8061952 protein FLOWERING LOCUS T
8064814 O, Y LOC8064814 chalcone synthase 2
8064815 O, Y LOC8064815 chalcone synthase 2
8064816 O, Y LOC8064816 chalcone synthase 2
8064817 O, Y LOC8064817 chalcone synthase 1
8064818 O, Y LOC8064818 chalcone synthase 3
8064819 O, Y LOC8064819 chalcone synthase 7
8064820 O, Y LOC8064820 chalcone synthase 6
8065120 O, N LOC8065120 adagio-like protein 1
8065332 O, N LOC8065332 ELF3-like protein 2
8068219 C, C LOC8068219 WD repeat-containing protein RUP2
8069174 O, C LOC8069174 protein HEADING DATE 3A
8069670 O, Y LOC8069670 chalcone synthase 1
8070845 M, C LOC8070845 two-component response regulator-like PRR37
8071295 O, N LOC8071295 transcription factor APG
8072426 O, Y LOC8072426 protein FLOWERING LOCUS T
8072479 O, N LOC8072479 two-component response regulator-like PRR1
8073696 O, Y LOC8073696 protein FLOWERING LOCUS T
8073810 O, Y LOC8073810 protein FLOWERING LOCUS T
8074618 O, N LOC8074618 protein SUPPRESSOR OF PHYA-105 1
8074643 O, N LOC8074643 putative adagio-like protein 2
8074795 S, N LOC8074795 transcription factor TCP7
8078190 O, N LOC8078190 ELF3-like protein 2
8078292 M, N LOC8078292 cryptochrome-1
8078473 C, N LOC8078473 transcription factor HY5
8078944 C, N LOC8078944 E3 ubiquitin-protein ligase COP1
8079504 O, Y LOC8079504 protein RICE FLOWERING LOCUS T 1
8080836 S, N LOC8080836 protein CCA1
8081072 C, C LOC8081072 phytochrome B
8081615 O, Y LOC8081615 casein kinase II subunit alpha
8082252 O, N LOC8082252 transcription factor HY5
8082858 C, N LOC8082858 transcription factor TCP7
8082929 C, N LOC8082929 transcription factor HY5
8083977 M, C LOC8083977 casein kinase II subunit alpha
8084453 C, N LOC8084453 transcription factor TCP7
8084889 O, N LOC8084889 two-component response regulator-like PRR73
8085835 C, C LOC8085835 casein kinase II subunit alpha-2
8155369 O, Y LOC8155369 protein FLOWERING LOCUS T
110431830 O, N LOC110431830 putative casein kinase II subunit beta-4
110432809 O, N LOC110432809 two-component response regulator-like PRR95
110432853 O, N LOC110432853 putative casein kinase II subunit beta-4
110433900 O, N LOC110433900 protein GIGANTEA
110433966 O, N LOC110433966 transcription factor APG-like
110435145 O, N LOC110435145 cryptochrome-1-like
110436372 O, N LOC110436372 casein kinase II subunit beta-1-like
110436666 O, Y LOC110436666 cryptochrome-1-like


List of genes in sot


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
102577452 O, Y FT flowering locus T protein
102577598 O, Y CHS2 chalcone synthase 2
102577627 M, C C-PHYA type A phytochrome
102577671 O, N CO CONSTANS
102577871 O, Y CHS1A chalcone synthase 1a
102577925 C, C LOC102577925 phytochrome B
102578719 O, C LOC102578719 protein GIGANTEA-like
102579194 O, Y LOC102579194 protein FLOWERING LOCUS T-like
102580017 O, Y LOC102580017 chalcone synthase 1B-like
102580483 O, C LOC102580483 cryptochrome-1-like
102581245 O, N LOC102581245 protein EARLY FLOWERING 3-like
102582324 O, N LOC102582324 two-component response regulator-like APRR1
102583141 O, C LOC102583141 cryptochrome-1-like
102583251 O, N LOC102583251 two-component response regulator-like PRR37
102583269 O, N LOC102583269 adagio protein 1-like
102583457 O, P LOC102583457 protein GIGANTEA-like
102586641 O, N LOC102586641 protein EARLY FLOWERING 3-like
102586679 O, Y LOC102586679 casein kinase II subunit alpha-2-like
102587101 C, N LOC102587101 protein SPA1-RELATED 4-like
102588526 C, N LOC102588526 transcription factor HY5
102588921 O, N LOC102588921 cryptochrome-1
102589008 O, N LOC102589008 two-component response regulator-like APRR5
102590078 C, C LOC102590078 casein kinase II subunit alpha-like
102590416 O, N LOC102590416 protein SPA1-RELATED 4-like
102590425 O, Y LOC102590425 chalcone synthase J
102590489 O, N LOC102590489 two-component response regulator-like APRR7
102591581 O, N LOC102591581 putative casein kinase II subunit beta-4
102592355 O, N LOC102592355 E3 ubiquitin-protein ligase COP1-like
102592624 O, N LOC102592624 transcription factor TCP7-like
102593062 O, N LOC102593062 protein SUPPRESSOR OF PHYA-105 1-like
102593553 O, N LOC102593553 adagio protein 3
102593655 O, N LOC102593655 two-component response regulator-like APRR1
102594048 O, Y LOC102594048 casein kinase II subunit alpha-2
102594940 O, N LOC102594940 putative casein kinase II subunit beta-4
102595537 O, N LOC102595537 chalcone synthase J
102595874 O, Y LOC102595874 chalcone synthase J
102597046 O, N LOC102597046 protein EARLY FLOWERING 3
102597285 O, N LOC102597285 protein SPA1-RELATED 2
102597719 O, N LOC102597719 putative casein kinase II subunit beta-4
102600211 O, N LOC102600211 casein kinase II subunit beta-3-like
102601288 O, N LOC102601288 protein EARLY FLOWERING 3-like
102601616 O, N LOC102601616 protein LHY
102601844 O, Y LOC102601844 protein HEADING DATE 3A-like
102602733 O, C LOC102602733 WD repeat-containing protein RUP2-like
102603187 O, N LOC102603187 two-component response regulator-like APRR5
102604891 O, N LOC102604891 transcription factor PIF3-like
102605087 C, Y LOC102605087 chalcone synthase J
102605188 O, N LOC102605188 transcription factor TCP7
102605430 O, N LOC102605430 E3 ubiquitin-protein ligase COP1-like
102605989 O, N LOC102605989 protein FLOWERING LOCUS T-like
102606292 O, Y LOC102606292 protein FLOWERING LOCUS T-like
102606326 O, Y LOC102606326 protein FLOWERING LOCUS T-like


List of genes in cit


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
102606708 O, Y LOC102606708 chalcone synthase 1
102607013 C, C LOC102607013 WD repeat-containing protein RUP2
102607069 O, Y LOC102607069 protein HEADING DATE 3A-like
102607309 O, C LOC102607309 chalcone synthase 2-like
102607363 O, Y LOC102607363 protein HEADING DATE 3A-like
102608210 C, N LOC102608210 transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15
102608753 C, C LOC102608753 casein kinase II subunit alpha-2-like
102609249 M, N LOC102609249 cryptochrome-1
102610014 O, N LOC102610014 two-component response regulator-like APRR7
102610914 O, C LOC102610914 zinc finger protein CONSTANS-LIKE 2
102611814 M, C LOC102611814 casein kinase II subunit alpha-2
102611930 O, N LOC102611930 E3 ubiquitin-protein ligase COP1
102612856 M, Y LOC102612856 chalcone synthase 2-like
102613437 M, Y LOC102613437 chalcone synthase 2-like
102613944 O, N LOC102613944 adagio protein 1
102614563 C, N LOC102614563 transcription factor HY5
102615318 O, N LOC102615318 protein EARLY FLOWERING 3
102616330 O, N LOC102616330 chalcone synthase-like
102616503 C, N LOC102616503 phytochrome A-2
102616594 O, N LOC102616594 two-component response regulator-like APRR7
102616595 O, C LOC102616595 protein HEADING DATE 3A-like
102616623 O, Y LOC102616623 chalcone synthase 2-like
102618185 M, C LOC102618185 phytochrome B
102618939 O, N LOC102618939 casein kinase II subunit beta-1
102619470 M, Y LOC102619470 casein kinase II subunit alpha-2-like
102620619 O, S LOC102620619 chalcone synthase-like
102621125 O, N LOC102621125 transcription factor PIF3
102621189 O, N LOC102621189 protein SPA1-RELATED 2
102621387 O, N LOC102621387 casein kinase II subunit beta-1
102622101 O, N LOC102622101 ELF3-like protein 2
102622921 O, N LOC102622921 two-component response regulator-like APRR3
102623358 O, N LOC102623358 transcription factor TCP7
102626186 O, N LOC102626186 two-component response regulator-like APRR1
102626778 O, P LOC102626778 chalcone synthase-like
102626780 O, P LOC102626780 protein GIGANTEA
102627009 C, N LOC102627009 protein SPA1-RELATED 3
102627326 O, N LOC102627326 protein LATE ELONGATED HYPOCOTYL
102629616 O, C LOC102629616 chalcone synthase-like
102630424 M, M LOC102630424 cryptochrome-1
102630709 O, N LOC102630709 adagio protein 3
102630875 O, N LOC102630875 two-component response regulator-like APRR3
102631246 O, N LOC102631246 two-component response regulator-like APRR5
107175605 C, N LOC107175605 transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15-like
127899064 O, Y LOC127899064 chalcone synthase-like


List of genes in bdi


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
100821861 M, N LOC100821861 putative casein kinase II subunit beta-4
100822452 O, N LOC100822452 transcription factor TCP7
100822483 M, C LOC100822483 casein kinase II subunit alpha
100822621 O, N LOC100822621 protein GIGANTEA
100822627 O, N LOC100822627 protein SUPPRESSOR OF PHYA-105 1
100823239 O, Y LOC100823239 protein FLOWERING LOCUS T
100823250 O, N LOC100823250 transcription factor APG
100823927 O, N LOC100823927 two-component response regulator-like PRR95
100825301 C, N LOC100825301 transcription factor HY5
100826277 S, C LOC100826277 casein kinase II subunit alpha-2
100827075 O, Y LOC100827075 protein FLOWERING LOCUS T
100827481 O, N LOC100827481 E3 ubiquitin-protein ligase COP1
100827500 O, N LOC100827500 casein kinase II subunit beta-1
100827542 O, N LOC100827542 casein kinase II subunit beta-1
100828254 C, N LOC100828254 transcription factor TCP21
100829142 O, Y LOC100829142 protein FLOWERING LOCUS T
100829639 O, Y LOC100829639 chalcone synthase 2
100829838 M, C LOC100829838 phytochrome B
100831155 O, N LOC100831155 two-component response regulator-like PRR1
100831221 O, Y LOC100831221 protein HEADING DATE 3A
100832001 O, Y LOC100832001 protein FLOWERING LOCUS T
100832311 O, C LOC100832311 adagio-like protein 1
100833269 O, N LOC100833269 protein SPA1-RELATED 4
100833505 O, N LOC100833505 cryptochrome-1
100836209 M, C LOC100836209 phytochrome A type 3
100836271 O, Y LOC100836271 putative adagio-like protein 2
100836913 C, N LOC100836913 transcription factor HY5
100836961 C, C LOC100836961 WD repeat-containing protein RUP2
100837712 O, Y LOC100837712 protein FLOWERING LOCUS T
100838275 O, Y LOC100838275 protein HEADING DATE 3A
100838310 O, N LOC100838310 protein CCA1
100838321 O, N LOC100838321 cryptochrome-1
100838360 O, N LOC100838360 two-component response regulator-like PRR37
100838991 O, N LOC100838991 ELF3-like protein 2
100839051 O, Y LOC100839051 cryptochrome-1
100839215 O, N LOC100839215 transcription factor HY5
100839492 O, N LOC100839492 putative casein kinase II subunit beta-4
100839551 O, N LOC100839551 casein kinase II subunit alpha-2
100839860 O, N LOC100839860 two-component response regulator-like APRR3
100840348 O, N LOC100840348 two-component response regulator-like PRR73
100844358 O, N LOC100844358 transcription factor APG
100845844 O, Y LOC100845844 adagio-like protein 3
100846754 O, Y LOC100846754 casein kinase II subunit alpha-2
104583882 O, N LOC104583882 transcription factor TCP7-like


List of genes in nta


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
107759187 O, N LOC107759187 protein SPA1-RELATED 3
107759873 O, N LOC107759873 two-component response regulator-like APRR7
107762016 O, P LOC107762016 protein GIGANTEA-like
107764723 O, N LOC107764723 E3 ubiquitin-protein ligase COP1-like
107765723 O, N LOC107765723 zinc finger protein CONSTANS-LIKE 2-like
107765780 O, N LOC107765780 protein GIGANTEA-like
107766207 C, N LOC107766207 ELF3-like protein 2
107767359 M, C LOC107767359 phytochrome B
107768013 C, N LOC107768013 protein SPA1-RELATED 4
107769959 O, N LOC107769959 transcription factor TCP7-like
107770013 C, C LOC107770013 casein kinase II subunit alpha-like
107770532 O, N LOC107770532 putative casein kinase II subunit beta-4
107772947 O, N LOC107772947 casein kinase II subunit beta-3
107773326 O, N LOC107773326 E3 ubiquitin-protein ligase COP1
107773506 O, N LOC107773506 protein SPA1-RELATED 2
107774540 O, Y LOC107774540 adagio protein 3
107775221 O, N LOC107775221 adagio protein 1
107775222 O, N LOC107775222 protein LATE ELONGATED HYPOCOTYL-like
107776843 C, N LOC107776843 transcription factor HY5
107778287 O, Y LOC107778287 WD repeat-containing protein RUP2
107778992 M, N LOC107778992 phytochrome B-like
107779253 O, K LOC107779253 protein VERNALIZATION 3
107780646 O, N LOC107780646 two-component response regulator-like APRR5
107783380 O, Y LOC107783380 adagio protein 3
107783425 O, N LOC107783425 casein kinase II subunit beta-1
107783525 O, N LOC107783525 two-component response regulator-like PRR37
107784593 M, N LOC107784593 transcription factor PIF3
107784760 S, Y LOC107784760 protein GIGANTEA
107785468 O, N LOC107785468 ELF3-like protein 2
107785832 O, N LOC107785832 zinc finger protein CONSTANS-LIKE 2
107786145 O, N LOC107786145 protein LATE ELONGATED HYPOCOTYL
107786372 O, N LOC107786372 adagio protein 1
107787206 O, N LOC107787206 putative casein kinase II subunit beta-4
107787558 O, N LOC107787558 casein kinase II subunit beta-1-like
107789145 O, Y LOC107789145 casein kinase II subunit alpha-1
107789408 O, Y LOC107789408 casein kinase II subunit alpha-1-like
107789414 O, N LOC107789414 ELF3-like protein 2
107790240 O, C LOC107790240 cryptochrome-1
107790758 M, C LOC107790758 cryptochrome-1
107791774 O, N LOC107791774 two-component response regulator-like PRR37
107793894 O, Y LOC107793894 protein VERNALIZATION 3
107795081 M, N LOC107795081 transcription factor PIF3
107797204 O, N LOC107797204 protein SUPPRESSOR OF PHYA-105 1
107800631 O, N LOC107800631 protein SPA1-RELATED 2
107801263 C, C LOC107801263 chalcone synthase G
107801774 O, Y LOC107801774 chalcone synthase
107801908 O, N LOC107801908 two-component response regulator-like APRR9
107801912 O, Y LOC107801912 protein VERNALIZATION 3
107802108 O, N LOC107802108 two-component response regulator-like APRR5
107802838 O, N LOC107802838 two-component response regulator-like APRR1
107804272 O, N LOC107804272 ELF3-like protein 2
107804540 O, N LOC107804540 protein EARLY FLOWERING 3-like
107804719 O, Y LOC107804719 protein VERNALIZATION 3-like
107805461 O, C LOC107805461 protein VERNALIZATION 3-like
107806932 O, N LOC107806932 two-component response regulator-like APRR9
107809465 O, N LOC107809465 protein EARLY FLOWERING 3
107809744 M, Y LOC107809744 chalcone synthase 2
107811264 O, N LOC107811264 E3 ubiquitin-protein ligase COP1
107811287 O, N LOC107811287 two-component response regulator-like APRR7
107811695 O, N LOC107811695 protein HEADING DATE 3B
107812152 M, C LOC107812152 phytochrome A1
107812461 O, N LOC107812461 putative casein kinase II subunit beta-4
107812932 O, Y LOC107812932 casein kinase II subunit alpha-2
107813210 C, C LOC107813210 casein kinase II subunit alpha-2-like
107813393 O, N LOC107813393 cryptochrome-1
107813425 O, Y LOC107813425 chalcone synthase J
107813613 O, Y LOC107813613 chalcone synthase A
107814282 O, N LOC107814282 casein kinase II subunit beta-3
107815247 O, N LOC107815247 putative casein kinase II subunit beta-4
107816957 C, N LOC107816957 protein SPA1-RELATED 4
107818975 O, N LOC107818975 two-component response regulator-like APRR1
107819279 C, N LOC107819279 transcription factor TCP7-like
107820217 O, C LOC107820217 cryptochrome-1
107822055 O, Y LOC107822055 protein FLOWERING LOCUS T
107824806 O, N LOC107824806 protein SUPPRESSOR OF PHYA-105 1-like
107824964 O, Y LOC107824964 protein FLOWERING LOCUS T 1
107826422 M, Y LOC107826422 chalcone synthase 2-like
107827195 O, N LOC107827195 E3 ubiquitin-protein ligase COP1
107827325 O, N LOC107827325 protein SPA1-RELATED 3
107827926 O, N LOC107827926 transcription factor PIF3-like
107830175 O, N LOC107830175 transcription factor TCP7
107830603 O, N LOC107830603 cryptochrome-1
107830690 O, N LOC107830690 protein EARLY FLOWERING 3
107831140 O, Y LOC107831140 WD repeat-containing protein RUP2
107832158 O, N LOC107832158 ELF3-like protein 2
107832227 O, Y LOC107832227 casein kinase II subunit alpha-like
107832236 O, Y LOC107832236 chalcone synthase G
142161620 O, N LOC142161620 transcription factor TCP7-like
142161804 O, Y LOC142161804 protein FLOWERING LOCUS T-like
142167789 O, Y LOC142167789 protein VERNALIZATION 3-like
142179585 C, N LOC142179585 transcription factor HY5-like
142181579 O, Y LOC142181579 protein VERNALIZATION 3-like


The preparation time of this page was 7.7 [sec].